Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT3G01513 Arabidopsis thaliana HOM05D009188 ORTHO05D011362 2.8e-112 408.7 217 100.0
AL3G10650 Arabidopsis lyrata HOM05D009188 ORTHO05D011362 3.8e-93 345.1 217 85.3
Carub.0003s0057 Capsella rubella HOM05D009188 ORTHO05D011362 5.4e-63 245.0 224 69.6
CARHR075430 Cardamine hirsuta HOM05D009188 ORTHO05D011362 3.3e-60 235.7 225 66.2
Aa31LG5G10630 Aethionema arabicum HOM05D009188 ORTHO05D011362 3.2e-47 192.6 263 51.3
A05p44500 Brassica napus HOM05D009188 ORTHO05D011362 1.1e-42 177.6 222 54.1
BcaC05g30409 Brassica carinata HOM05D009188 ORTHO05D011362 9.0e-42 174.5 239 51.0
AL6G25500 Arabidopsis lyrata HOM05D009188 ORTHO05D011362 2.3e-37 159.8 256 46.1
Sp3g00550 Schrenkiella parvula HOM05D009188 ORTHO05D011362 8.7e-37 157.9 242 47.1
C09p75090 Brassica napus HOM05D009188 ORTHO05D011362 1.6e-35 153.7 223 50.7
BolC5t35155H Brassica oleracea HOM05D009188 ORTHO05D011362 1.6e-35 153.7 223 50.7
Thhalv10014334m.g Eutrema salsugineum HOM05D009188 ORTHO05D011362 2.9e-32 142.9 259 43.2
Carub.0006s1290 Capsella rubella HOM05D009188 ORTHO05D011362 6.5e-32 141.7 257 43.2
Sp6g29310 Schrenkiella parvula HOM05D009188 ORTHO05D011362 6.5e-32 141.7 270 41.9
AT5G14730 Arabidopsis thaliana HOM05D009188 ORTHO05D011362 1.8e-29 133.7 249 43.4
BcaC04g19015 Brassica carinata HOM05D009188 ORTHO05D011362 8.7e-29 131.3 255 42.4
BolC9t59079H Brassica oleracea HOM05D009188 ORTHO05D011362 8.7e-29 131.3 255 42.4
CARHR198580 Cardamine hirsuta HOM05D009188 ORTHO05D011362 3.3e-28 129.4 240 44.6
C09p62410 Brassica napus HOM05D009188 ORTHO05D011362 9.6e-28 127.9 254 40.9
A10p23940 Brassica napus HOM05D009188 ORTHO05D011362 4.8e-27 125.6 267 41.2
BraA02t05239Z Brassica rapa HOM05D009188 ORTHO05D011362 6.3e-27 125.2 228 42.5
BraA10t44458Z Brassica rapa HOM05D009188 ORTHO05D011362 2.4e-26 123.2 265 39.2
BcaNung03098 Brassica carinata HOM05D009188 ORTHO05D011362 6.9e-26 121.7 237 42.2
C02p07280 Brassica napus HOM05D009188 ORTHO05D011362 6.9e-26 121.7 237 42.2
A02p02700 Brassica napus HOM05D009188 ORTHO05D011362 1.1e-23 114.4 229 40.2
THA.LOC104822391 Tarenaya hassleriana HOM05D009188 ORTHO05D011362 1.9e-23 113.6 240 38.8
BcaB08g36952 Brassica carinata HOM05D009188 ORTHO05D011362 4.6e-22 109.0 268 38.1
Aa31LG11G14730 Aethionema arabicum HOM05D009188 ORTHO05D011362 8.7e-21 104.8 241 41.1
BolC2t06659H Brassica oleracea HOM05D009188 ORTHO05D011362 1.1e-18 97.8 164 41.5
BcaC03g13450 Brassica carinata HOM05D009188 ORTHO05D011362 1.1e-12 77.8 129 44.2
BcaC05g30448 Brassica carinata HOM05D009188 ORTHO05D011362 3.7e-11 72.8 73 63.0
Gohir.D10G087500 Gossypium hirsutum HOM05D001111 ORTHO05D000939 1.4e-10 70.9 276 29.3
Gorai.011G095800 Gossypium raimondii HOM05D001111 ORTHO05D000939 3.1e-10 69.7 276 29.0
Gohir.A10G103400 Gossypium hirsutum HOM05D001111 ORTHO05D000939 6.9e-10 68.6 272 29.0
Thecc.04G010500 Theobroma cacao HOM05D001111 ORTHO05D000939 9.1e-10 68.2 272 27.9
Duzib147G1636 Durio zibethinus HOM05D001111 ORTHO05D000939 5.0e-08 62.4 268 28.7
DCAR_021689 Daucus carota HOM05D001111 ORTHO05D000939 6.5e-08 62.0 238 29.4
Gohir.D07G227700 Gossypium hirsutum HOM05D001111 ORTHO05D000939 6.5e-08 62.0 235 30.2
Oeu016383.1 Olea europaea HOM05D001111 ORTHO05D000939 6.5e-08 62.0 129 36.4
RcHm_v2.0_Chr2g0172191 Rosa chinensis HOM05D001111 ORTHO05D000939 6.5e-08 62.0 263 30.4
Aa31LG2G4860 Aethionema arabicum HOM05D001111 ORTHO05D000939 1.1e-07 61.2 271 27.3
TPR.G1693 Trifolium pratense HOM05D001111 ORTHO05D000939 1.4e-07 60.8 143 31.5
BcaNung03099 Brassica carinata HOM05D009188 ORTHO05D011362 2.5e-07 60.1 68 55.9
Gorai.001G262600 Gossypium raimondii HOM05D001111 ORTHO05D000939 2.5e-07 60.1 234 29.1
Lj7P592T34 Lonicera japonica HOM05D001111 ORTHO05D000939 2.5e-07 60.1 129 36.4
BcaC04g19013 Brassica carinata HOM05D009188 ORTHO05D011362 3.2e-07 59.7 87 47.1
SalBow1G0495 Salvia bowleyana HOM05D001111 ORTHO05D000939 3.2e-07 59.7 236 25.8
Cpa.g.sc76.61 Carica papaya HOM05D001111 ORTHO05D000939 5.5e-07 58.9 124 35.5
Manes.06G104800 Manihot esculenta HOM05D001111 ORTHO05D000939 7.2e-07 58.5 117 29.9
CAN.G628.80 Capsicum annuum HOM05D001111 ORTHO05D000939 9.4e-07 58.2 124 36.3
FAN02G0682 Fragaria x ananassa HOM05D001111 ORTHO05D000939 9.4e-07 58.2 245 27.3
FAN05G2415 Fragaria x ananassa HOM05D001111 ORTHO05D000939 9.4e-07 58.2 254 27.6
Ca_16179_v3 Cicer arietinum L. HOM05D001111 ORTHO05D000939 2.1e-06 57.0 137 31.4
Ca_16180_v3 Cicer arietinum L. HOM05D001111 ORTHO05D000939 2.1e-06 57.0 137 31.4
Dinv00507 Davidia involucrata HOM05D001111 ORTHO05D000939 2.1e-06 57.0 279 25.8
Nitab4.5_0009783g0040 Nicotiana tabacum HOM05D001111 ORTHO05D000939 2.1e-06 57.0 145 29.7
CDE06G1645 Ceratophyllum demersum HOM05D000875 ORTHO05D000939 2.7e-06 56.6 131 30.5
Lsat_1_v5_gn_5_14521 Lactuca sativa HOM05D001111 ORTHO05D000939 2.7e-06 56.6 178 28.7
TWI23G0219 Tripterygium wilfordii HOM05D001111 ORTHO05D000939 2.7e-06 56.6 276 26.4
TWI39G0739 Tripterygium wilfordii HOM05D001111 ORTHO05D000939 2.7e-06 56.6 143 32.2
VMungo1309G2238 Vigna mungo HOM05D001111 ORTHO05D000939 2.7e-06 56.6 137 30.7
Medtr3g077890 Medicago truncatula HOM05D001111 ORTHO05D000939 3.6e-06 56.2 179 27.9
Nitab4.5_0007208g0010 Nicotiana tabacum HOM05D001111 ORTHO05D000939 3.6e-06 56.2 255 28.6
Peaxi162Scf00700g00061 Petunia axillaris HOM05D001111 ORTHO05D000939 3.6e-06 56.2 136 36.0
Phvul.009G178600 Phaseolus vulgaris HOM05D001111 ORTHO05D000939 3.6e-06 56.2 137 31.4
CSS0035264 Camellia sinensis var. sinensis HOM05D001111 ORTHO05D000939 4.7e-06 55.8 274 24.1
Sabra12G0057900 Salix brachista HOM05D001111 ORTHO05D000939 4.7e-06 55.8 145 33.1
Atru.chr9.2477 Acer truncatum HOM05D001111 ORTHO05D000939 6.1e-06 55.5 153 30.1
Lju41C35T12 Lonicera japonica HOM05D001111 ORTHO05D000939 6.1e-06 55.5 259 25.9
Atru.chr6.2310 Acer truncatum HOM05D001111 ORTHO05D000939 7.9e-06 55.1 263 27.8
Nn4g22768 Nelumbo nucifera HOM05D001111 ORTHO05D000939 7.9e-06 55.1 185 28.1
TWI31G0459 Tripterygium wilfordii HOM05D001111 ORTHO05D000939 7.9e-06 55.1 294 27.6


User provided reference genes

Program Settings