Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT3G01030 Arabidopsis thaliana HOM05D010061 ORTHO05D015940 4.7e-208 727.6 372 100.0
AL3G11240 Arabidopsis lyrata HOM05D010061 ORTHO05D015940 4.8e-152 541.6 335 85.1
Carub.0003s0115 Capsella rubella HOM05D010061 ORTHO05D015940 2.6e-121 439.5 348 72.4
Sp3g01110 Schrenkiella parvula HOM05D010061 ORTHO05D015940 5.1e-69 265.8 379 50.9
C03p39850 Brassica napus HOM05D010061 ORTHO05D015940 3.1e-66 256.5 362 50.6
Thhalv10022306m.g Eutrema salsugineum HOM05D010061 ORTHO05D015940 7.1e-63 245.4 353 50.4
BraA03t12444Z Brassica rapa HOM05D010061 ORTHO05D015940 1.9e-60 237.3 357 49.3
A03p32750 Brassica napus HOM05D010061 ORTHO05D015940 2.5e-60 236.9 357 49.3
BolC3t16248H Brassica oleracea HOM05D010061 ORTHO05D015940 3.3e-60 236.5 365 48.2
BcaC01g04493 Brassica carinata HOM05D010061 ORTHO05D015940 9.0e-58 228.4 370 46.5
BcaC01g04459 Brassica carinata HOM05D010061 ORTHO05D015940 1.2e-57 228.0 323 50.2
C03p08160 Brassica napus HOM05D010061 ORTHO05D014864 9.3e-39 165.2 390 39.7
BcaB01g05050 Brassica carinata HOM05D010061 ORTHO05D014864 2.3e-37 160.6 344 41.3
Sp6g28620 Schrenkiella parvula HOM05D010061 ORTHO05D014864 3.3e-36 156.8 358 37.2
A03p07170 Brassica napus HOM05D010061 ORTHO05D014864 1.1e-34 151.8 364 36.5
BolC3t13313H Brassica oleracea HOM05D010061 ORTHO05D014864 2.9e-32 143.7 373 36.2
BraA03t10039Z Brassica rapa HOM05D010061 ORTHO05D014864 6.5e-32 142.5 362 35.6
Carub.0006s1364 Capsella rubella HOM05D010061 ORTHO05D014864 1.1e-31 141.7 390 36.2
THA.LOC104803130 Tarenaya hassleriana HOM05D010061 ORTHO05D014864 3.2e-31 140.2 342 37.4
Thhalv10015968m.g Eutrema salsugineum HOM05D010061 ORTHO05D014864 1.1e-28 131.7 373 35.7
AL6G26330 Arabidopsis lyrata HOM05D010061 ORTHO05D014864 1.7e-27 127.9 475 32.0
CARHR197830 Cardamine hirsuta HOM05D010061 ORTHO05D014864 1.1e-26 125.2 378 32.3
Thhalv10002882m.g Eutrema salsugineum HOM05D010061 ORTHO05D014864 4.1e-26 123.2 351 34.8
AT5G15480 Arabidopsis thaliana HOM05D010061 ORTHO05D014864 2.5e-23 114.0 435 31.0
Gohir.A05G371200 Gossypium hirsutum HOM05D001658 ORTHO05D001406 4.5e-09 66.6 382 25.7
Gorai.012G049800 Gossypium raimondii HOM05D001658 ORTHO05D001406 7.7e-09 65.9 335 26.0
CSS0006199 Camellia sinensis var. sinensis HOM05D001658 ORTHO05D001406 1.0e-08 65.5 318 28.0
Peaxi162Scf00013g00059 Petunia axillaris HOM05D001658 ORTHO05D001406 1.0e-08 65.5 343 26.5
Peaxi162Scf00201g00007 Petunia axillaris HOM05D001658 ORTHO05D001406 1.7e-08 64.7 354 28.5
Psat5g211760 Pisum sativum HOM05D001658 ORTHO05D001406 5.0e-08 63.2 323 27.9
DCAR_016593 Daucus carota HOM05D001658 ORTHO05D001406 3.2e-07 60.5 325 25.5
HanXRQChr04g0101431 Helianthus annuus HOM05D001658 ORTHO05D001406 3.2e-07 60.5 299 26.4
Sed0022118 Sechium edule HOM05D001658 ORTHO05D001406 3.2e-07 60.5 353 25.8
Actinidia17578 Actinidia chinensis HOM05D001658 ORTHO05D001406 4.2e-07 60.1 354 27.1
Gohir.D04G044500 Gossypium hirsutum HOM05D001658 ORTHO05D001406 4.2e-07 60.1 338 25.4
Manes.06G087200 Manihot esculenta HOM05D001658 ORTHO05D001406 7.2e-07 59.3 372 26.3
Sed0012205 Sechium edule HOM05D001658 ORTHO05D001406 2.1e-06 57.8 370 23.2
MSTRG.9603 Avicennia marina HOM05D001658 ORTHO05D001406 2.7e-06 57.4 349 27.5
Nitab4.5_0002881g0100 Nicotiana tabacum HOM05D001658 ORTHO05D001406 6.1e-06 56.2 344 29.4
Manes.14G084100 Manihot esculenta HOM05D001658 ORTHO05D001406 8.0e-06 55.8 388 25.3
Phvul.009G190665 Phaseolus vulgaris HOM05D001658 ORTHO05D001406 8.0e-06 55.8 350 26.0
TAR371G0514 Trochodendron aralioides HOM05D001658 ORTHO05D001406 8.0e-06 55.8 376 25.0


User provided reference genes

Program Settings