Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT2G47930 Arabidopsis thaliana HOM05D011411 ORTHO05D006440 2.6e-55 218.8 137 100.0
AL39U10120 Arabidopsis lyrata HOM05D011411 ORTHO05D006440 1.1e-48 196.8 140 85.7
AL4G47520 Arabidopsis lyrata HOM05D011411 ORTHO05D006440 1.1e-48 196.8 140 85.7
Carub.0004s3065 Capsella rubella HOM05D011411 ORTHO05D006440 5.5e-45 184.5 137 80.3
Sp4g29850 Schrenkiella parvula HOM05D011411 ORTHO05D006440 1.3e-41 173.3 138 85.5
CARHR143320 Cardamine hirsuta HOM05D011411 ORTHO05D006440 3.7e-41 171.8 135 82.2
Thhalv10001715m.g Eutrema salsugineum HOM05D011411 ORTHO05D006440 2.0e-39 166.0 132 78.0
BcaB02g08726 Brassica carinata HOM05D011411 ORTHO05D006440 3.2e-37 158.7 140 79.3
C04p00020 Brassica napus HOM05D011411 ORTHO05D006440 7.2e-37 157.5 139 79.9
BcaC02g12535 Brassica carinata HOM05D011411 ORTHO05D006440 2.1e-36 156.0 139 79.9
BolC4t21649H Brassica oleracea HOM05D011411 ORTHO05D006440 2.1e-36 156.0 139 79.9
A05p00100 Brassica napus HOM05D011411 ORTHO05D006440 3.6e-36 155.2 139 79.9
BraA05t19006Z Brassica rapa HOM05D011411 ORTHO05D006440 3.6e-36 155.2 139 79.9
Aa31LG1G29360 Aethionema arabicum HOM05D011411 ORTHO05D006440 1.3e-33 146.7 138 70.3
A04p35130 Brassica napus HOM05D011411 ORTHO05D006440 5.0e-30 134.8 138 70.3
BolC4t28784H Brassica oleracea HOM05D000915 ORTHO05D001662 1.9e-29 132.9 137 67.2
BcaC02g06998 Brassica carinata HOM05D011411 ORTHO05D006440 3.2e-29 132.1 137 66.4
BraA04t18949Z Brassica rapa HOM05D011411 ORTHO05D006440 5.3e-24 114.8 131 67.2
Nitab4.5_0002093g0180 Nicotiana tabacum HOM05D000530 ORTHO05D000621 5.7e-10 68.2 97 52.6
Ciclev10022800m.g Citrus clementina HOM05D007701 ORTHO05D006440 1.3e-09 67.0 126 45.2
CAN.G2895.2 Capsicum annuum HOM05D007701 ORTHO05D006440 4.8e-09 65.1 121 47.9
Potri.014G135100 Populus trichocarpa HOM05D007701 ORTHO05D006440 6.3e-09 64.7 113 51.3
CAN.G426.28 Capsicum annuum HOM05D007701 ORTHO05D006440 1.4e-08 63.5 121 47.9
Sopen09g029300 Solanum pennellii HOM05D007701 ORTHO05D006440 1.4e-08 63.5 120 47.5
Solyc09g074450.1 Solanum lycopersicum HOM05D007701 ORTHO05D006440 1.8e-08 63.2 120 47.5
Nitab4.5_0004150g0050 Nicotiana tabacum HOM05D007701 ORTHO05D006440 2.4e-08 62.8 122 48.4
PGSC0003DMG400031864 Solanum tuberosum HOM05D007701 ORTHO05D006440 2.4e-08 62.8 123 46.3
QL12p024168 Quercus lobata HOM05D007701 ORTHO05D006440 2.0e-07 59.7 116 47.4
Manes.05G068100 Manihot esculenta HOM05D007701 ORTHO05D006440 2.7e-07 59.3 136 44.9
CiPaw.07G100300 Carya illinoinensis HOM05D007701 ORTHO05D006440 7.7e-07 57.8 136 41.9
CANSAT25G3325 Cannabis sativa HOM05D007701 ORTHO05D006440 2.9e-06 55.8 117 44.4
Hma1.2p1_0209F.1_g089060 Hydrangea macrophylla HOM05D007701 ORTHO05D006440 3.8e-06 55.5 112 46.4
Potri.002G207500 Populus trichocarpa HOM05D007701 ORTHO05D006440 5.0e-06 55.1 134 45.5


User provided reference genes

Program Settings