Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT2G47760 Arabidopsis thaliana HOM05D001496 ORTHO05D007453 3.2e-229 798.1 413 100.0
AL4G47330 Arabidopsis lyrata HOM05D001496 ORTHO05D007453 2.9e-214 748.4 412 93.0
Carub.0004s3047 Capsella rubella HOM05D001496 ORTHO05D007453 1.7e-203 712.6 412 89.3
Thhalv10001458m.g Eutrema salsugineum HOM05D001496 ORTHO05D007453 2.1e-201 705.7 405 88.9
Sp4g29690 Schrenkiella parvula HOM05D001496 ORTHO05D007453 3.2e-197 691.8 416 87.0
Aa31LG1G29100 Aethionema arabicum HOM05D001496 ORTHO05D007453 4.3e-194 681.4 400 86.8
BcaB02g08748 Brassica carinata HOM05D001496 ORTHO05D007453 5.6e-194 681.0 406 86.9
A05p00200 Brassica napus HOM05D001496 ORTHO05D007453 2.1e-188 662.5 430 81.4
THA.LOC104802172 Tarenaya hassleriana HOM05D001496 ORTHO05D007453 2.1e-188 662.5 417 81.5
C04p00120 Brassica napus HOM05D001496 ORTHO05D007453 7.6e-183 644.0 414 81.4
BcaC02g12544 Brassica carinata HOM05D001496 ORTHO05D007453 6.5e-182 641.0 406 82.3
Cpa.g.sc9.209 Carica papaya HOM05D001496 ORTHO05D007453 8.2e-169 597.4 410 75.4
Atru.chr5.1181 Acer truncatum HOM05D001496 ORTHO05D007453 2.9e-166 589.0 393 76.3
Aqoxy2G02984 Aquilegia oxysepala HOM05D001496 ORTHO05D007453 1.4e-165 586.6 402 72.6
Manes.05G064100 Manihot esculenta HOM05D001496 ORTHO05D007453 1.9e-165 586.3 412 71.4
Thecc.01G297200 Theobroma cacao HOM05D001496 ORTHO05D007453 7.2e-165 584.3 407 72.5
TWI14G0104 Tripterygium wilfordii HOM05D001496 ORTHO05D007453 1.2e-164 583.6 398 73.1
Cfa005950 Carpinus fangiana HOM05D001496 ORTHO05D007453 2.7e-164 582.4 412 71.6
vmacro02468 Vaccinium macrocarpon HOM05D001496 ORTHO05D007453 2.7e-164 582.4 394 73.9
Actinidia24335 Actinidia chinensis HOM05D001496 ORTHO05D007453 6.1e-164 581.3 392 74.5
Rhsim13G0012500 Rhododendron simsii HOM05D001496 ORTHO05D007453 6.1e-164 581.3 394 73.1
Eucgr.H01160 Eucalyptus grandis HOM05D001496 ORTHO05D007453 7.9e-164 580.9 418 72.2
HanXRQChr12g0382731 Helianthus annuus HOM05D001496 ORTHO05D007453 1.8e-163 579.7 417 71.0
Sabra14G0097800 Salix brachista HOM05D001496 ORTHO05D007453 3.0e-163 578.9 407 72.5
Glyma.19G210000 Glycine max HOM05D001496 ORTHO05D007453 3.9e-163 578.6 422 71.1
Duzib133G1333 Durio zibethinus HOM05D001496 ORTHO05D007453 5.1e-163 578.2 409 71.4
Potri.014G131600 Populus trichocarpa HOM05D001496 ORTHO05D007453 2.0e-162 576.2 403 72.2
CANSAT25G1124 Cannabis sativa HOM05D001496 ORTHO05D007453 7.4e-162 574.3 405 70.9
Haze_04897 Corylus avellana HOM05D001496 ORTHO05D007453 9.7e-162 573.9 417 70.7
Gorai.008G011100 Gossypium raimondii HOM05D001496 ORTHO05D007453 2.8e-161 572.4 408 70.3
CSS0045492 Camellia sinensis var. sinensis HOM05D001496 ORTHO05D007453 4.8e-161 571.6 413 70.9
Dinv19717 Davidia involucrata HOM05D001496 ORTHO05D007453 8.2e-161 570.9 372 75.5
GSVIVG01027976001 Vitis vinifera HOM05D001496 ORTHO05D007453 8.2e-161 570.9 412 69.9
Ciclev10020260m.g Citrus clementina HOM05D001496 ORTHO05D007453 1.1e-160 570.5 386 73.3
Gohir.D12G011100 Gossypium hirsutum HOM05D001496 ORTHO05D007453 1.4e-160 570.1 408 69.9
PSO170G1216 Papaver somniferum HOM05D001496 ORTHO05D007453 1.4e-160 570.1 411 69.3
Psat3g022520 Pisum sativum HOM05D001496 ORTHO05D007453 1.8e-160 569.7 398 71.9
Glyma.03G213200 Glycine max HOM05D001496 ORTHO05D007453 2.4e-160 569.3 402 71.4
MD11G1304600 Malus domestica HOM05D001496 ORTHO05D007453 9.1e-160 567.4 420 68.3
Prupe.8G258400 Prunus persica HOM05D001496 ORTHO05D007453 9.1e-160 567.4 412 70.6
Hma1.2p1_0209F.1_g088590 Hydrangea macrophylla HOM05D001496 ORTHO05D007453 1.2e-159 567.0 395 72.4
Gohir.A12G010700 Gossypium hirsutum HOM05D001496 ORTHO05D007453 2.6e-159 565.8 408 69.1
Nitab4.5_0005474g0020 Nicotiana tabacum HOM05D001496 ORTHO05D007453 4.5e-159 565.1 413 68.0
FAN24G2787 Fragaria x ananassa HOM05D001496 ORTHO05D007453 5.9e-159 564.7 402 70.6
arahy.Tifrunner.gnm1.ann1.RVL32D Arachis hypogaea HOM05D001496 ORTHO05D007453 7.7e-159 564.3 393 71.8
FAN15G3342 Fragaria x ananassa HOM05D001496 ORTHO05D007453 7.7e-159 564.3 386 72.3
Lj1g0019023 Lotus japonicus HOM05D001496 ORTHO05D007453 1.3e-158 563.5 393 72.3
Solyc09g074900.4 Solanum lycopersicum HOM05D001496 ORTHO05D007453 1.7e-158 563.1 413 68.0
Ca_09147_v3 Cicer arietinum L. HOM05D001496 ORTHO05D007453 2.9e-158 562.4 393 71.8
PGSC0003DMG400011393 Solanum tuberosum HOM05D001496 ORTHO05D007453 6.5e-158 561.2 406 68.5
arahy.Tifrunner.gnm1.ann1.D4F8D3 Arachis hypogaea HOM05D001496 ORTHO05D007453 1.4e-157 560.1 393 71.2
TPR.G9626 Trifolium pratense HOM05D001496 ORTHO05D007453 2.5e-157 559.3 393 71.0
Lalb_Chr04g0259811 Lupinus albus HOM05D001496 ORTHO05D007453 3.2e-157 558.9 394 70.3
CAN.G339.32 Capsicum annuum HOM05D001496 ORTHO05D007453 4.2e-157 558.5 406 68.2
Medtr7g108620 Medicago truncatula HOM05D001496 ORTHO05D007453 4.2e-157 558.5 421 68.4
TAR365G0358 Trochodendron aralioides HOM05D001496 ORTHO05D007453 4.2e-157 558.5 420 68.6
Sopen09g029720 Solanum pennellii HOM05D001496 ORTHO05D007453 5.5e-157 558.1 398 69.1
RcHm_v2.0_Chr6g0293561 Rosa chinensis HOM05D001496 ORTHO05D007453 3.6e-156 555.4 409 68.0
Sc10g0000910 Simmondsia chinensis HOM05D001496 ORTHO05D007453 6.1e-156 554.7 387 71.3
CiPaw.07G106500 Carya illinoinensis HOM05D001496 ORTHO05D007453 7.9e-156 554.3 405 71.1
Cc01_g20650 Coffea canephora HOM05D001496 ORTHO05D007453 6.7e-155 551.2 387 71.8
Lsat_1_v5_gn_5_190521 Lactuca sativa HOM05D001496 ORTHO05D007453 6.7e-155 551.2 405 68.9
SalBow3G1333 Salvia bowleyana HOM05D001496 ORTHO05D007453 6.7e-155 551.2 420 67.1
DCAR_002814 Daucus carota HOM05D001496 ORTHO05D007453 1.1e-154 550.4 406 68.0
CARHR143130 Cardamine hirsuta HOM05D001496 ORTHO05D007453 2.0e-154 549.7 303 92.4
Migut.D00196 Erythranthe guttata HOM05D001496 ORTHO05D007453 2.0e-154 549.7 394 70.8
Lj2C1190T13 Lonicera japonica HOM05D001496 ORTHO05D007453 4.4e-154 548.5 400 68.8
EL10Ac2g04497 Beta vulgaris HOM05D001496 ORTHO05D007453 3.5e-151 538.9 380 70.0
ECA248G3024 Erigeron canadensis HOM05D001496 ORTHO05D007453 5.9e-151 538.1 374 72.2
CsaV3_7G029100 Cucumis sativus L. HOM05D001496 ORTHO05D007453 1.7e-150 536.6 392 68.9
unitig_0.g1180 Utricularia gibba HOM05D001496 ORTHO05D007453 1.1e-149 533.9 393 67.7
Peaxi162Scf00067g02528 Petunia axillaris HOM05D001496 ORTHO05D007453 5.5e-149 531.6 410 65.4
MELO3C016018.2 Cucumis melo HOM05D001496 ORTHO05D007453 7.2e-149 531.2 392 67.9
Nitab4.5_0000619g0030 Nicotiana tabacum HOM05D001496 ORTHO05D007453 1.2e-148 530.4 470 59.6
COL.COLO4_23374 Corchorus olitorius HOM05D001496 ORTHO05D007453 2.1e-148 529.6 382 71.2
Hund16196 Selenicereus undatus HOM05D001496 ORTHO05D007453 8.0e-148 527.7 403 67.0
Oeu048346.1 Olea europaea HOM05D001496 ORTHO05D007453 1.4e-147 526.9 492 58.1
Zm00001eb122900 Zea mays HOM05D001496 ORTHO05D007453 2.3e-147 526.2 408 66.9
BraA05t19016Z Brassica rapa HOM05D001496 ORTHO05D007453 3.0e-147 525.8 340 82.9
ClCG09G006040 Citrullus lanatus HOM05D001496 ORTHO05D007453 4.0e-147 525.4 410 65.9
AUR62023251 Chenopodium quinoa HOM05D001496 ORTHO05D007453 1.7e-145 520.0 386 68.1
CDE02G4632 Ceratophyllum demersum HOM05D001496 ORTHO05D007453 2.2e-145 519.6 377 67.6
Lalb_Chr04g0259801 Lupinus albus HOM05D001496 ORTHO05D007453 2.2e-145 519.6 394 67.8
AUR62023205 Chenopodium quinoa HOM05D001496 ORTHO05D007453 3.7e-145 518.8 386 67.9
Phvul.001G205800 Phaseolus vulgaris HOM05D001496 ORTHO05D007453 2.4e-144 516.2 379 68.9
HPP92_016896 Vanilla planifolia HOM05D001496 ORTHO05D007453 4.1e-144 515.4 403 65.0
Nn7g38144 Nelumbo nucifera HOM05D001496 ORTHO05D007453 7.0e-144 514.6 385 67.8
QL12p027136 Quercus lobata HOM05D001496 ORTHO05D007453 9.1e-144 514.2 342 76.0
Sed0004349 Sechium edule HOM05D001496 ORTHO05D007453 1.2e-143 513.8 365 69.6
ATR0796G343 Amborella trichopoda HOM05D001496 ORTHO05D007453 6.1e-140 501.5 359 68.5
Pp3c10_8510 Physcomitrium patens HOM05D001496 ORTHO05D007453 2.0e-138 496.5 391 64.2
PGR119G0252 Punica granatum HOM05D001496 ORTHO05D007453 8.3e-137 491.1 418 62.7
PGR119G1256 Punica granatum HOM05D001496 ORTHO05D007453 8.3e-137 491.1 418 62.7
TAR633G2480 Trochodendron aralioides HOM05D001496 ORTHO05D007453 1.6e-135 486.9 374 67.9
Mapoly0077s0004 Marchantia polymorpha HOM05D001496 ORTHO05D007453 8.8e-131 471.1 379 64.9
AagrBONN_evm.TU.Sc2ySwM_368.922 Anthoceros agrestis HOM05D001496 ORTHO05D007453 3.4e-122 442.6 381 59.6
SMO111G0159 Selaginella moellendorffii HOM05D001496 ORTHO05D007453 1.8e-120 436.8 368 62.2
FvH4_2g25370 Fragaria vesca HOM05D001496 ORTHO05D007453 1.9e-117 426.8 300 70.3
SGA_v2.0_scaffold1G00377 Striga asiatica HOM05D000802 ORTHO05D001074 1.4e-112 410.6 387 58.9
Hma1.2p1_0209F.1_g088600 Hydrangea macrophylla HOM05D001496 ORTHO05D007453 9.2e-112 407.9 395 57.0
CBR_g23454 Chara braunii HOM05D001496 ORTHO05D007453 1.5e-106 390.6 390 54.9
Ah.16g101380 Amaranthus hybridus HOM05D001496 ORTHO05D007453 6.0e-103 378.6 359 58.8
HPP92_016892 Vanilla planifolia HOM05D001496 ORTHO05D007453 4.0e-99 365.9 279 64.5
TAR633G0725 Trochodendron aralioides HOM05D001496 ORTHO05D007453 1.0e-94 351.3 252 70.2
MCO05G420 Micromonas commoda HOM05D001496 ORTHO05D007453 5.1e-94 349.0 379 50.9
MD03G1285200 Malus domestica HOM05D001496 ORTHO05D007453 3.3e-85 319.7 229 72.9
FAN15G0073 Fragaria x ananassa HOM05D001496 ORTHO05D007453 4.3e-85 319.3 219 75.8
FAN20G0671 Fragaria x ananassa HOM05D001496 ORTHO05D007453 3.9e-78 296.2 315 54.0
PRCOL_00006487 Prasinoderma coloniale HOM05D001496 ORTHO05D007453 3.3e-77 293.1 381 46.5
MD03G1285100 Malus domestica HOM05D001496 ORTHO05D007453 2.5e-64 250.4 194 63.4
Haze_26252 Corylus avellana HOM05D001496 ORTHO05D007453 6.0e-63 245.7 379 42.0
COL.COLO4_15168 Corchorus olitorius HOM05D001496 ORTHO05D007453 8.2e-52 208.8 120 82.5
Gohir.A05G239300 Gossypium hirsutum HOM05D001496 ORTHO05D007453 1.8e-51 207.6 149 68.5
COL.COLO4_05649 Corchorus olitorius HOM05D001496 ORTHO05D007453 1.6e-47 194.5 112 82.1
Gohir.A01G111300 Gossypium hirsutum HOM05D001496 ORTHO05D007453 1.4e-43 181.4 133 68.4
Gohir.A02G071100 Gossypium hirsutum HOM05D001496 ORTHO05D007453 2.0e-42 177.6 133 67.7
A03p26050 Brassica napus HOM05D000073 ORTHO05D000033 5.0e-41 172.9 105 80.0
BraA03t11820Z Brassica rapa HOM05D001496 ORTHO05D007453 5.0e-41 172.9 105 80.0
Gohir.A12G153600 Gossypium hirsutum HOM05D001496 ORTHO05D007453 6.5e-41 172.6 133 65.4
Os01g0172000 Oryza sativa ssp. japonica HOM05D001496 ORTHO05D007453 7.4e-37 159.1 121 66.1
Gohir.A07G160700 Gossypium hirsutum HOM05D001496 ORTHO05D007453 8.5e-33 145.6 103 70.9
BolC3t15455H Brassica oleracea HOM05D001496 ORTHO05D007453 1.0e-30 138.7 129 61.2
C03p31050 Brassica napus HOM05D001496 ORTHO05D007453 9.7e-29 132.1 131 59.5
MBI19_g29447_MAGBIO Magnolia biondii HOM05D001496 ORTHO05D007453 2.9e-25 120.6 69 79.7
MBI14_g09685_MAGBIO Magnolia biondii HOM05D001496 ORTHO05D007453 4.7e-23 113.2 69 76.8
SEGI_31251 Sequoiadendron giganteum HOM05D001496 ORTHO05D007453 8.8e-22 109.0 86 62.8
FAN27G2092 Fragaria x ananassa HOM05D001496 ORTHO05D007453 7.5e-21 105.9 84 56.0
Actinidia02729 Actinidia chinensis HOM05D001496 ORTHO05D007453 1.3e-17 95.1 214 40.2
QL02p058842 Quercus lobata HOM05D001496 ORTHO05D000125 2.2e-17 94.4 49 83.7
SEGI_39661 Sequoiadendron giganteum HOM05D001496 ORTHO05D007453 8.8e-14 82.4 54 63.0
QL02p059219 Quercus lobata HOM05D001496 ORTHO05D007453 5.7e-13 79.7 51 74.5
Gohir.A01G167500 Gossypium hirsutum HOM05D001496 ORTHO05D047734 1.8e-11 74.7 41 82.9
HanXRQChr05g0138141 Helianthus annuus HOM05D001496 ORTHO05D007453 1.8e-11 74.7 43 79.1


User provided reference genes

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