Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT2G47050 Arabidopsis thaliana HOM05D008602 ORTHO05D012039 3.9e-122 441.4 217 100.0
AL4G46550 Arabidopsis lyrata HOM05D008602 ORTHO05D012039 2.8e-120 435.3 217 98.2
Carub.0004s2979 Capsella rubella HOM05D008602 ORTHO05D012039 4.0e-114 414.8 217 92.2
CARHR142410 Cardamine hirsuta HOM05D008602 ORTHO05D012039 2.2e-112 409.1 217 92.6
Sp4g29040 Schrenkiella parvula HOM05D008602 ORTHO05D012039 4.8e-112 407.9 217 92.2
Thhalv10001629m.g Eutrema salsugineum HOM05D008602 ORTHO05D012039 1.4e-111 406.4 217 92.2
BcaB06g29463 Brassica carinata HOM05D008602 ORTHO05D012039 2.8e-104 382.1 217 85.7
A04p34790 Brassica napus HOM05D008602 ORTHO05D012039 3.7e-104 381.7 215 86.0
BraA04t18934Z Brassica rapa HOM05D008602 ORTHO05D012039 3.7e-104 381.7 215 86.0
A05p00750 Brassica napus HOM05D008602 ORTHO05D012039 4.8e-104 381.3 217 85.7
BcaC01g05047 Brassica carinata HOM05D008602 ORTHO05D012039 1.8e-103 379.4 215 85.6
C03p30770 Brassica napus HOM05D008602 ORTHO05D012039 1.8e-103 379.4 215 85.6
BolC3t15427H Brassica oleracea HOM05D008602 ORTHO05D012039 1.8e-103 379.4 215 85.6
BraA05t19079Z Brassica rapa HOM05D008602 ORTHO05D012039 1.8e-103 379.4 217 85.3
BraA03t11797Z Brassica rapa HOM05D008602 ORTHO05D012039 4.1e-103 378.3 215 85.1
A03p25830 Brassica napus HOM05D008602 ORTHO05D012039 5.4e-103 377.9 215 85.1
BcaC02g09027 Brassica carinata HOM05D008602 ORTHO05D012039 7.0e-103 377.5 217 85.3
C04p00910 Brassica napus HOM05D008602 ORTHO05D012039 7.0e-103 377.5 217 85.3
BolC4t21729H Brassica oleracea HOM05D008602 ORTHO05D012039 7.0e-103 377.5 217 85.3
C04p72560 Brassica napus HOM05D008602 ORTHO05D012039 1.6e-102 376.3 215 85.1
BolC4t28744H Brassica oleracea HOM05D008602 ORTHO05D012039 1.6e-102 376.3 215 85.1
Aa31LG1G28390 Aethionema arabicum HOM05D008602 ORTHO05D012039 1.2e-91 340.1 217 76.0
THA.LOC104817438 Tarenaya hassleriana HOM05D008602 ORTHO05D012039 7.3e-68 261.2 226 60.2
THA.LOC104827651 Tarenaya hassleriana HOM05D008602 ORTHO05D012039 4.7e-67 258.5 228 60.5
THA.LOC104802122 Tarenaya hassleriana HOM05D008602 ORTHO05D012039 8.1e-67 257.7 227 59.9
BraA07t30237Z Brassica rapa HOM05D008602 ORTHO05D013475 1.5e-65 253.4 219 60.7
A07p25900 Brassica napus HOM05D008602 ORTHO05D013475 2.6e-65 252.7 219 60.3
C06p28150 Brassica napus HOM05D008602 ORTHO05D013475 1.9e-63 246.5 219 59.4
BolC6t37981H Brassica oleracea HOM05D008602 ORTHO05D013475 1.9e-63 246.5 219 59.4
Thhalv10006384m.g Eutrema salsugineum HOM05D008602 ORTHO05D013475 4.1e-63 245.4 218 58.7
Sp5g01200 Schrenkiella parvula HOM05D008602 ORTHO05D013475 6.6e-61 238.0 220 58.6
AL5G44930 Arabidopsis lyrata HOM05D008602 ORTHO05D013475 1.5e-60 236.9 219 57.1
AT3G62180 Arabidopsis thaliana HOM05D008602 ORTHO05D013475 2.8e-59 232.6 218 56.0
CARHR172520 Cardamine hirsuta HOM05D008602 ORTHO05D013475 2.8e-59 232.6 221 57.9
BolC8t51290H Brassica oleracea HOM05D008602 ORTHO05D013475 2.0e-57 226.5 218 55.5
BcaC07g40710 Brassica carinata HOM05D008602 ORTHO05D013475 2.6e-57 226.1 218 55.5
A09p54250 Brassica napus HOM05D008602 ORTHO05D013475 3.4e-57 225.7 218 55.0
BraA09t40837Z Brassica rapa HOM05D008602 ORTHO05D013475 3.4e-57 225.7 218 55.0
C08p37120 Brassica napus HOM05D008602 ORTHO05D013475 5.8e-57 224.9 218 55.0
BcaC07g40708 Brassica carinata HOM05D008602 ORTHO05D013475 2.4e-55 219.5 222 53.6
Carub.0005s2891 Capsella rubella HOM05D008602 ORTHO05D013475 9.3e-55 217.6 221 53.4
BraA04t15789Z Brassica rapa HOM05D008602 ORTHO05D024467 1.6e-54 216.9 212 54.2
A04p00700 Brassica napus HOM05D008602 ORTHO05D024467 4.6e-54 215.3 212 53.8
BcaC02g10283 Brassica carinata HOM05D008602 ORTHO05D024467 5.1e-53 211.8 203 54.2
C04p30790 Brassica napus HOM05D008602 ORTHO05D024467 5.1e-53 211.8 203 54.2
BcaB02g07346 Brassica carinata HOM05D008602 ORTHO05D013475 1.9e-52 209.9 219 53.0
BolC4t24598H Brassica oleracea HOM05D008602 ORTHO05D024467 2.5e-52 209.5 203 53.7
Aa31LG10G16140 Aethionema arabicum HOM05D000036 ORTHO05D000441 2.1e-51 206.5 198 56.6
BcaB02g08120 Brassica carinata HOM05D000703 ORTHO05D000633 3.7e-27 125.9 145 48.3
A09p54240 Brassica napus HOM05D000036 ORTHO05D000441 5.9e-17 92.0 206 28.2
BraA09t40836Z Brassica rapa HOM05D000036 ORTHO05D000441 5.9e-17 92.0 206 28.2
BcaC07g40707 Brassica carinata HOM05D000036 ORTHO05D000441 2.2e-16 90.1 191 28.8
C08p37110 Brassica napus HOM05D000036 ORTHO05D000441 2.2e-16 90.1 191 28.8
BolC8t51289H Brassica oleracea HOM05D000036 ORTHO05D000441 2.9e-16 89.7 191 28.3
BcaB02g07347 Brassica carinata HOM05D000036 ORTHO05D000441 1.4e-15 87.4 171 29.8
C06p28140 Brassica napus HOM05D000036 ORTHO05D000441 3.2e-15 86.3 171 29.8
BolC6t37980H Brassica oleracea HOM05D000036 ORTHO05D000441 3.2e-15 86.3 171 29.8
A07p25890 Brassica napus HOM05D000036 ORTHO05D000441 4.2e-15 85.9 171 29.2
BraA07t30236Z Brassica rapa HOM05D000036 ORTHO05D000441 4.2e-15 85.9 171 29.2
Thhalv10005855m.g Eutrema salsugineum HOM05D000036 ORTHO05D000441 7.2e-15 85.1 191 27.2
Carub.0004s2978 Capsella rubella HOM05D000036 ORTHO05D000441 9.4e-15 84.7 208 27.9
A05p00770 Brassica napus HOM05D000036 ORTHO05D000441 1.2e-14 84.3 181 28.7
BraA05t19080Z Brassica rapa HOM05D000036 ORTHO05D000441 1.2e-14 84.3 181 28.7
Carub.0005s2890 Capsella rubella HOM05D000036 ORTHO05D000441 1.6e-14 84.0 164 29.3
AL5G44920 Arabidopsis lyrata HOM05D000036 ORTHO05D000441 2.7e-14 83.2 151 31.8
AT2G47040 Arabidopsis thaliana HOM05D000036 ORTHO05D000441 2.7e-14 83.2 208 27.4
BcaC02g10282 Brassica carinata HOM05D000036 ORTHO05D000441 2.7e-14 83.2 164 28.0
A04p00710 Brassica napus HOM05D000036 ORTHO05D000441 2.7e-14 83.2 164 28.0
C04p30810 Brassica napus HOM05D000036 ORTHO05D000441 2.7e-14 83.2 164 28.0
BolC4t24601H Brassica oleracea HOM05D000036 ORTHO05D000441 2.7e-14 83.2 164 28.0
BcaB02g08121 Brassica carinata HOM05D000036 ORTHO05D000441 3.6e-14 82.8 164 28.7
A04p34780 Brassica napus HOM05D000036 ORTHO05D000441 3.6e-14 82.8 189 28.0
C04p72550 Brassica napus HOM05D000036 ORTHO05D000441 3.6e-14 82.8 189 28.0
BolC4t28743H Brassica oleracea HOM05D000036 ORTHO05D000441 3.6e-14 82.8 189 28.0
BraA04t18933Z Brassica rapa HOM05D000036 ORTHO05D000441 3.6e-14 82.8 189 28.0
BraA04t15791Z Brassica rapa HOM05D000036 ORTHO05D000441 6.1e-14 82.0 164 27.4
Sp4g29030 Schrenkiella parvula HOM05D000036 ORTHO05D000441 6.1e-14 82.0 208 26.4
Sp5g01210 Schrenkiella parvula HOM05D000036 ORTHO05D000441 7.9e-14 81.6 164 28.0
BcaB06g29464 Brassica carinata HOM05D000036 ORTHO05D000441 1.0e-13 81.3 163 28.8
Carub.0004s2977 Capsella rubella HOM05D000036 ORTHO05D000441 1.4e-13 80.9 181 29.3
Thhalv10001369m.g Eutrema salsugineum HOM05D000036 ORTHO05D000441 1.8e-13 80.5 194 26.8
AT3G62170 Arabidopsis thaliana HOM05D000036 ORTHO05D000441 2.3e-13 80.1 180 29.4
CARHR172510 Cardamine hirsuta HOM05D000036 ORTHO05D000441 3.0e-13 79.7 151 29.1
BcaB01g03192 Brassica carinata HOM05D000036 ORTHO05D000441 6.7e-13 78.6 201 26.9
AL4G46540 Arabidopsis lyrata HOM05D008602 ORTHO05D000441 2.6e-12 76.6 203 28.1
C04p00930 Brassica napus HOM05D000036 ORTHO05D000441 3.3e-12 76.3 181 27.6
BolC4t21731H Brassica oleracea HOM05D000036 ORTHO05D000441 3.3e-12 76.3 181 27.6
CARHR142400 Cardamine hirsuta HOM05D000036 ORTHO05D000441 3.3e-12 76.3 202 26.7
AT2G47030 Arabidopsis thaliana HOM05D000036 ORTHO05D000441 4.4e-12 75.9 193 28.5
Cpa.g.sc41.94 Carica papaya HOM05D000036 ORTHO05D000441 7.4e-12 75.1 170 23.5
BcaC01g05049 Brassica carinata HOM05D000036 ORTHO05D000441 2.8e-11 73.2 194 26.8
C03p30760 Brassica napus HOM05D000036 ORTHO05D000441 2.8e-11 73.2 194 26.8
A03p25820 Brassica napus HOM05D000036 ORTHO05D000441 4.8e-11 72.4 194 26.8
BolC3t15426H Brassica oleracea HOM05D000036 ORTHO05D000441 4.8e-11 72.4 194 26.8
BraA03t11796Z Brassica rapa HOM05D000036 ORTHO05D000441 4.8e-11 72.4 194 26.8
THA.LOC104817436 Tarenaya hassleriana HOM05D000036 ORTHO05D000441 1.8e-10 70.5 153 28.1
THA.LOC104802121 Tarenaya hassleriana HOM05D000036 ORTHO05D000441 2.2e-08 63.5 179 25.1
Aa31LG1G28380 Aethionema arabicum HOM05D002601 ORTHO05D002884 8.5e-08 61.6 176 23.9
Peaxi162Scf00750g00057 Petunia axillaris HOM05D000036 ORTHO05D000441 7.2e-07 58.5 202 22.3
Phvul.001G217400 Phaseolus vulgaris HOM05D000036 ORTHO05D000441 1.6e-06 57.4 176 23.3
Lj5g0002768 Lotus japonicus HOM05D000036 ORTHO05D000441 6.1e-06 55.5 215 21.9


User provided reference genes

Program Settings