Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT2G46900 Arabidopsis thaliana HOM05D006867 ORTHO05D008676 0.0e+00 1201.4 628 100.0
AL4G46360 Arabidopsis lyrata HOM05D006867 ORTHO05D008676 2.1e-309 1065.1 636 89.9
Carub.0004s2962 Capsella rubella HOM05D006867 ORTHO05D008676 1.4e-292 1009.2 634 86.1
Sp4g28920 Schrenkiella parvula HOM05D006867 ORTHO05D008676 2.3e-263 912.1 640 76.9
Thhalv10001357m.g Eutrema salsugineum HOM05D006867 ORTHO05D008676 2.6e-259 898.7 643 76.8
CARHR142250 Cardamine hirsuta HOM05D006867 ORTHO05D008676 2.3e-247 859.0 631 74.5
Aa31LG1G28260 Aethionema arabicum HOM05D006867 ORTHO05D008676 2.1e-245 852.4 653 73.2
BolC4t21761H Brassica oleracea HOM05D006867 ORTHO05D008676 2.7e-224 782.3 643 69.2
A05p00940 Brassica napus HOM05D006867 ORTHO05D008676 6.1e-224 781.2 641 69.0
C04p01080 Brassica napus HOM05D006867 ORTHO05D008676 5.0e-218 761.5 625 69.6
THA.LOC104817409 Tarenaya hassleriana HOM05D006867 ORTHO05D008676 2.3e-215 752.7 649 63.9
Ciclev10019260m.g Citrus clementina HOM05D006867 ORTHO05D008676 2.1e-200 703.0 634 60.7
COL.COLO4_23081 Corchorus olitorius HOM05D006867 ORTHO05D008676 2.0e-198 696.4 640 59.7
Thecc.01G329400 Theobroma cacao HOM05D006867 ORTHO05D008676 1.1e-196 690.6 636 59.4
Atru.chr5.813 Acer truncatum HOM05D006867 ORTHO05D008676 2.7e-195 686.0 644 60.4
BcaC02g12633 Brassica carinata HOM05D006867 ORTHO05D008676 1.7e-194 683.3 640 64.7
Gohir.A12G118400 Gossypium hirsutum HOM05D006867 ORTHO05D008676 2.3e-191 672.9 631 59.1
Gohir.D12G122200 Gossypium hirsutum HOM05D006867 ORTHO05D008676 5.7e-190 668.3 632 59.2
Gorai.008G133000 Gossypium raimondii HOM05D006867 ORTHO05D008676 2.2e-189 666.4 632 59.0
Potri.002G183500 Populus trichocarpa HOM05D006867 ORTHO05D008676 1.2e-187 660.6 647 57.3
Manes.01G237400 Manihot esculenta HOM05D006867 ORTHO05D008676 7.8e-187 657.9 626 58.5
QL08p048171 Quercus lobata HOM05D006867 ORTHO05D008676 6.6e-186 654.8 605 59.7
Sabra14G0080800 Salix brachista HOM05D006867 ORTHO05D008676 8.6e-186 654.4 628 59.1
Potri.014G109500 Populus trichocarpa HOM05D006867 ORTHO05D008676 2.3e-183 646.4 632 57.4
GSVIVG01027485001 Vitis vinifera HOM05D006867 ORTHO05D008676 6.8e-183 644.8 593 58.9
CANSAT56G0208 Cannabis sativa HOM05D006867 ORTHO05D008676 7.5e-182 641.3 637 57.0
Sabra02G0132100 Salix brachista HOM05D006867 ORTHO05D008676 8.3e-181 637.9 644 56.4
CANSAT56G2490 Cannabis sativa HOM05D006867 ORTHO05D008676 1.9e-180 636.7 637 56.7
Cc00_g15760 Coffea canephora HOM05D006867 ORTHO05D008676 1.7e-178 630.2 649 54.9
CiPaw.02G046400 Carya illinoinensis HOM05D006867 ORTHO05D008676 5.0e-178 628.6 601 56.9
Actinidia08011 Actinidia chinensis HOM05D006867 ORTHO05D008676 3.3e-177 625.9 653 54.1
Lalb_Chr10g0101011 Lupinus albus HOM05D006867 ORTHO05D008676 3.3e-177 625.9 640 55.3
Phvul.010G121700 Phaseolus vulgaris HOM05D006867 ORTHO05D008676 1.6e-176 623.6 644 55.7
VMungo0331G1883 Vigna mungo HOM05D006867 ORTHO05D008676 2.8e-176 622.9 645 56.6
Glyma.07G047300 Glycine max HOM05D006867 ORTHO05D008676 2.3e-175 619.8 638 55.2
Dinv32661 Davidia involucrata HOM05D006867 ORTHO05D008676 6.8e-175 618.2 616 55.4
Lalb_Chr17g0343131 Lupinus albus HOM05D006867 ORTHO05D008676 6.8e-175 618.2 650 54.3
Glyma.16G015800 Glycine max HOM05D006867 ORTHO05D008676 8.9e-175 617.8 639 55.9
Haze_15774 Corylus avellana HOM05D006867 ORTHO05D008676 4.4e-174 615.5 631 55.9
EL10Ac9g22256 Beta vulgaris HOM05D006867 ORTHO05D008676 5.8e-174 615.1 638 53.1
MBI11_g13783_MAGBIO Magnolia biondii HOM05D006867 ORTHO05D008676 1.3e-173 614.0 636 53.3
Lj9A610G56 Lonicera japonica HOM05D006867 ORTHO05D008676 1.7e-173 613.6 650 53.8
Lj3g0022605 Lotus japonicus HOM05D006867 ORTHO05D008676 2.2e-173 613.2 642 55.9
arahy.Tifrunner.gnm1.ann1.L7530T Arachis hypogaea HOM05D006867 ORTHO05D008676 3.7e-173 612.5 673 54.5
Psat0s2980g0160 Pisum sativum HOM05D006867 ORTHO05D008676 1.1e-172 610.9 639 54.3
Oeu032684.1 Olea europaea HOM05D006867 ORTHO05D008676 1.4e-172 610.5 652 52.6
Sc08g0001320 Simmondsia chinensis HOM05D006867 ORTHO05D008676 4.1e-172 609.0 635 53.5
Prupe.2G203900 Prunus persica HOM05D006867 ORTHO05D008676 7.0e-172 608.2 622 54.5
Cfa003709 Carpinus fangiana HOM05D006867 ORTHO05D008676 4.6e-171 605.5 633 56.2
arahy.Tifrunner.gnm1.ann1.Y7T28V Arachis hypogaea HOM05D006867 ORTHO05D008676 6.0e-171 605.1 673 54.1
Ca_23461_v3 Cicer arietinum L. HOM05D006867 ORTHO05D008676 7.8e-171 604.7 643 54.6
Ca_23474_v3 Cicer arietinum L. HOM05D006867 ORTHO05D008676 7.8e-171 604.7 643 54.6
FAN06G0390 Fragaria x ananassa HOM05D006867 ORTHO05D008676 7.8e-171 604.7 629 54.1
Medtr8g023750 Medicago truncatula HOM05D006867 ORTHO05D008676 1.7e-170 603.6 643 54.4
Aqoxy5G04385 Aquilegia oxysepala HOM05D006867 ORTHO05D008676 3.9e-170 602.4 657 52.7
CAN.G90.6 Capsicum annuum HOM05D006867 ORTHO05D008676 1.1e-169 600.9 637 52.7
TAR629G2918 Trochodendron aralioides HOM05D006867 ORTHO05D008676 1.9e-169 600.1 644 52.8
Sed0008932 Sechium edule HOM05D006867 ORTHO05D008676 3.3e-169 599.4 642 52.3
Ah.01g010880 Amaranthus hybridus HOM05D006867 ORTHO05D008676 4.3e-169 599.0 646 53.3
FvH4_7g18270 Fragaria vesca HOM05D006867 ORTHO05D008676 4.3e-169 599.0 630 54.0
FAN06G3784 Fragaria x ananassa HOM05D006867 ORTHO05D008676 4.3e-169 599.0 630 54.1
AUR62039056 Chenopodium quinoa HOM05D006867 ORTHO05D008676 1.2e-168 597.4 641 52.9
AUR62010330 Chenopodium quinoa HOM05D006867 ORTHO05D008676 2.8e-168 596.3 640 53.0
RcHm_v2.0_Chr1g0361851 Rosa chinensis HOM05D006867 ORTHO05D008676 3.6e-168 595.9 640 52.0
Nitab4.5_0004754g0040 Nicotiana tabacum HOM05D006867 ORTHO05D008676 8.1e-168 594.7 637 50.9
Migut.I01214 Erythranthe guttata HOM05D006867 ORTHO05D008676 1.8e-167 593.6 652 50.8
MD07G1165200 Malus domestica HOM05D006867 ORTHO05D008676 1.8e-167 593.6 621 53.0
TPR.G32787 Trifolium pratense HOM05D006867 ORTHO05D008676 2.3e-167 593.2 640 53.0
FAN10G4369 Fragaria x ananassa HOM05D006867 ORTHO05D008676 3.1e-167 592.8 642 53.0
Eucgr.L00743 Eucalyptus grandis HOM05D006867 ORTHO05D008676 1.2e-166 590.9 644 52.6
Nitab4.5_0000348g0180 Nicotiana tabacum HOM05D006867 ORTHO05D008676 3.4e-166 589.3 652 49.7
FAN01G1143 Fragaria x ananassa HOM05D006867 ORTHO05D008676 5.8e-166 588.6 636 51.7
FAN03G0961 Fragaria x ananassa HOM05D006867 ORTHO05D008676 5.8e-166 588.6 636 51.7
Hund00158 Selenicereus undatus HOM05D006867 ORTHO05D008676 1.3e-165 587.4 659 52.2
MD01G1098500 Malus domestica HOM05D006867 ORTHO05D008676 2.9e-165 586.3 638 52.5
PSO782G1247 Papaver somniferum HOM05D006867 ORTHO05D008676 4.9e-165 585.5 645 52.7
FAN10G3600 Fragaria x ananassa HOM05D006867 ORTHO05D008676 2.4e-164 583.2 637 52.7
vmacro08516 Vaccinium macrocarpon HOM05D006867 ORTHO05D008676 2.4e-164 583.2 688 50.0
MSTRG.10869 Avicennia marina HOM05D006867 ORTHO05D008676 4.6e-163 578.9 491 59.7
ATR0824G236 Amborella trichopoda HOM05D006867 ORTHO05D008676 7.8e-163 578.2 643 50.5
Sopen08g006420 Solanum pennellii HOM05D006867 ORTHO05D008676 3.9e-162 575.9 640 50.2
ClCG05G000080 Citrullus lanatus HOM05D006867 ORTHO05D008676 5.1e-162 575.5 516 56.8
CsaV3_3G007140 Cucumis sativus L. HOM05D006867 ORTHO05D008676 2.5e-161 573.2 644 49.4
SalBow6G1414 Salvia bowleyana HOM05D006867 ORTHO05D008676 1.6e-160 570.5 650 50.5
TWI59G0124 Tripterygium wilfordii HOM05D006867 ORTHO05D008676 6.2e-160 568.5 641 50.5
HanXRQChr15g0480381 Helianthus annuus HOM05D006867 ORTHO05D008676 2.4e-159 566.6 612 51.5
Lsat_1_v5_gn_3_39660 Lactuca sativa HOM05D006867 ORTHO05D008676 2.2e-157 560.1 651 48.4
HPP92_013529 Vanilla planifolia HOM05D006867 ORTHO05D008676 6.4e-157 558.5 626 49.0
Rhsim04G0175800 Rhododendron simsii HOM05D006867 ORTHO05D008676 7.8e-155 551.6 603 51.7
Hma1.2p1_0074F.1_g039020 Hydrangea macrophylla HOM05D006867 ORTHO05D008676 6.6e-154 548.5 417 63.5
SGA_v2.0_scaffold122G33256 Striga asiatica HOM05D006867 ORTHO05D008676 1.5e-153 547.4 642 49.1
HanXRQChr17g0542101 Helianthus annuus HOM05D006867 ORTHO05D008676 2.5e-153 546.6 627 47.7
FAN01G0521 Fragaria x ananassa HOM05D006867 ORTHO05D008676 4.0e-151 539.3 463 57.9
Zm00001eb102740 Zea mays HOM05D006867 ORTHO05D008676 1.9e-148 530.4 643 47.7
Os09g0514900 Oryza sativa ssp. japonica HOM05D006867 ORTHO05D008676 2.5e-145 520.0 650 47.1
ECA246G2438 Erigeron canadensis HOM05D006867 ORTHO05D008676 4.2e-140 502.7 625 47.8
CSS0030251 Camellia sinensis var. sinensis HOM05D006867 ORTHO05D008676 5.4e-140 502.3 536 54.1
Peaxi162Scf01205g00180 Petunia axillaris HOM05D006867 ORTHO05D008676 1.6e-136 490.7 392 58.2
Cpa.g.sc1043.2 Carica papaya HOM05D006867 ORTHO05D008676 2.8e-136 490.0 344 67.4
DCAR_022120 Daucus carota HOM05D006867 ORTHO05D008676 2.4e-135 486.9 635 45.2
MELO3C005936.2 Cucumis melo HOM05D006867 ORTHO05D008676 5.5e-116 422.5 357 57.4
Pp3c1_12740 Physcomitrium patens HOM05D006867 ORTHO05D008676 2.5e-113 413.7 526 43.2
SMO331G0055 Selaginella moellendorffii HOM05D006867 ORTHO05D008676 8.2e-112 408.7 471 46.3
AagrBONN_evm.TU.Sc2ySwM_344.4360 Anthoceros agrestis HOM05D006867 ORTHO05D008676 4.7e-107 392.9 526 41.8
CDE09G1372 Ceratophyllum demersum HOM05D006867 ORTHO05D008676 1.4e-106 391.3 509 42.2
Mapoly0002s0219 Marchantia polymorpha HOM05D006867 ORTHO05D008676 1.2e-102 378.3 486 42.6
Pp3c11_2510 Physcomitrium patens HOM05D006867 ORTHO05D008676 3.5e-102 376.7 599 40.4
Cre11.g467639 Chlamydomonas reinhardtii HOM05D006867 ORTHO05D008676 8.9e-74 282.3 526 35.0
CBR_g36359 Chara braunii HOM05D006867 ORTHO05D008676 1.2e-73 282.0 665 29.2
PRCOL_00004033 Prasinoderma coloniale HOM05D006867 ORTHO05D008676 3.4e-57 227.3 548 30.7
MCO10G037 Micromonas commoda HOM05D006867 ORTHO05D008676 6.6e-53 213.0 564 27.5
Solyc08g016090.4 Solanum lycopersicum HOM05D006867 ORTHO05D008676 7.6e-41 172.9 427 28.3
C04p72500 Brassica napus HOM05D006867 ORTHO05D008676 2.9e-32 144.4 100 71.0
BolC4t28738H Brassica oleracea HOM05D006867 ORTHO05D008676 2.9e-32 144.4 100 71.0
A04p34720 Brassica napus HOM05D006867 ORTHO05D008676 7.9e-30 136.3 98 69.4
Cfa022788 Carpinus fangiana HOM05D006867 ORTHO05D008676 4.9e-16 90.5 435 23.2


User provided reference genes

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