Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT2G46505 Arabidopsis thaliana HOM05D011069 ORTHO05D010624 2.0e-72 275.8 152 100.0
AL4G45920 Arabidopsis lyrata HOM05D011069 ORTHO05D010624 1.0e-63 246.9 152 88.8
Carub.0004s2920 Capsella rubella HOM05D011069 ORTHO05D010624 2.8e-58 228.8 152 83.6
CARHR141830 Cardamine hirsuta HOM05D011069 ORTHO05D010624 1.9e-54 216.1 152 79.6
Sp4g28540 Schrenkiella parvula HOM05D011069 ORTHO05D010624 4.2e-46 188.3 153 68.0
A03p25700 Brassica napus HOM05D011069 ORTHO05D010624 2.2e-42 176.0 150 67.3
BraA03t11784Z Brassica rapa HOM05D011069 ORTHO05D010624 2.2e-42 176.0 150 67.3
BolC3t15414H Brassica oleracea HOM05D011069 ORTHO05D010624 4.8e-42 174.9 150 66.7
BcaC01g05061 Brassica carinata HOM05D011069 ORTHO05D010624 1.1e-41 173.7 150 66.7
C03p30640 Brassica napus HOM05D011069 ORTHO05D010624 1.1e-41 173.7 150 66.7
BcaB01g03211 Brassica carinata HOM05D011069 ORTHO05D010624 4.1e-41 171.8 152 67.8
BcaNung05601 Brassica carinata HOM05D011069 ORTHO05D010624 2.6e-40 169.1 150 63.3
BcaC02g12523 Brassica carinata HOM05D011069 ORTHO05D010624 9.4e-38 160.6 150 60.7
BraA05t19128Z Brassica rapa HOM05D011069 ORTHO05D010624 6.7e-36 154.5 150 59.3
A05p01300 Brassica napus HOM05D011069 ORTHO05D010624 4.4e-35 151.8 150 57.3
Thhalv10001774m.g Eutrema salsugineum HOM05D011069 ORTHO05D010624 1.9e-30 136.3 150 56.7
C04p01430 Brassica napus HOM05D000354 ORTHO05D010624 9.4e-30 134.0 153 53.6
BolC4t21797H Brassica oleracea HOM05D000354 ORTHO05D010624 9.4e-30 134.0 153 53.6
Aa31sc13G60 Aethionema arabicum HOM05D011069 ORTHO05D010624 2.1e-13 79.7 151 38.4
SHI15111 Sapria himalayana HOM05D005794 ORTHO05D006814 1.0e-07 60.8 55 56.4
EL10Ac1g02199 Beta vulgaris HOM05D005794 ORTHO05D006814 3.0e-07 59.3 55 54.5
CANSAT16G0049 Cannabis sativa HOM05D009845 ORTHO05D010624 3.0e-07 59.3 55 52.7
SHI37163 Sapria himalayana HOM05D005794 ORTHO05D006814 3.9e-07 58.9 55 52.7
MSTRG.25414 Avicennia marina HOM05D009845 ORTHO05D010624 5.0e-07 58.5 55 52.7
SHI35300 Sapria himalayana HOM05D005794 ORTHO05D006814 5.0e-07 58.5 55 52.7
SHI48376 Sapria himalayana HOM05D005794 ORTHO05D006814 5.0e-07 58.5 55 52.7
SHI44549 Sapria himalayana HOM05D005794 ORTHO05D006814 6.6e-07 58.2 53 54.7
SHI50742 Sapria himalayana HOM05D005794 ORTHO05D006814 1.5e-06 57.0 55 50.9
TWI39G0104 Tripterygium wilfordii HOM05D011069 ORTHO05D010624 1.5e-06 57.0 135 33.3
Potri.004G049600 Populus trichocarpa HOM05D009845 ORTHO05D010624 2.5e-06 56.2 49 57.1
Lalb_Chr00c24g0406721 Lupinus albus HOM05D005794 ORTHO05D006814 3.3e-06 55.8 55 49.1
Sabra04G0031300 Salix brachista HOM05D009845 ORTHO05D010624 7.3e-06 54.7 49 55.1
HanXRQChr01g0004171 Helianthus annuus HOM05D029082 ORTHO05D010624 9.5e-06 54.3 50 50.0


User provided reference genes

Program Settings