Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT2G44360 Arabidopsis thaliana HOM05D007302 ORTHO05D009191 4.0e-64 248.1 136 100.0
Carub.0004s2694 Capsella rubella HOM05D007302 ORTHO05D009191 4.7e-57 224.6 135 91.9
Thhalv10001676m.g Eutrema salsugineum HOM05D007302 ORTHO05D009191 6.2e-57 224.2 141 90.8
AL4G43340 Arabidopsis lyrata HOM05D007302 ORTHO05D009191 3.1e-56 221.9 134 91.8
CARHR139520 Cardamine hirsuta HOM05D007302 ORTHO05D009191 2.9e-54 215.3 134 89.6
Sp4g26420 Schrenkiella parvula HOM05D007302 ORTHO05D009191 9.3e-53 210.3 119 95.0
BcaB06g29370 Brassica carinata HOM05D007302 ORTHO05D009191 3.0e-51 205.3 136 85.3
C04p70980 Brassica napus HOM05D007302 ORTHO05D009191 3.0e-51 205.3 136 85.3
BolC4t28601H Brassica oleracea HOM05D007302 ORTHO05D009191 3.0e-51 205.3 136 85.3
Aa31LG1G25940 Aethionema arabicum HOM05D007302 ORTHO05D009191 1.1e-50 203.4 118 92.4
A04p33280 Brassica napus HOM05D007302 ORTHO05D009191 1.6e-49 199.5 136 82.4
BraA04t18789Z Brassica rapa HOM05D007302 ORTHO05D009191 1.6e-49 199.5 136 82.4
Prupe.2G003100 Prunus persica HOM05D007302 ORTHO05D009191 4.5e-47 191.4 117 85.5
MD07G1001600 Malus domestica HOM05D007302 ORTHO05D009191 3.8e-46 188.3 127 78.7
CANSAT11G0176 Cannabis sativa HOM05D007302 ORTHO05D009191 4.9e-46 188.0 120 85.8
THA.LOC104817151 Tarenaya hassleriana HOM05D007302 ORTHO05D009191 4.9e-46 188.0 118 83.9
FAN03G0504 Fragaria x ananassa HOM05D007302 ORTHO05D009191 6.4e-46 187.6 118 83.9
QL04p001433 Quercus lobata HOM05D007302 ORTHO05D009191 1.1e-45 186.8 117 85.5
Cfa010688 Carpinus fangiana HOM05D007302 ORTHO05D009191 1.6e-44 183.0 129 79.8
Haze_03286 Corylus avellana HOM05D007302 ORTHO05D009191 2.1e-44 182.6 129 79.8
RcHm_v2.0_Chr1g0313291 Rosa chinensis HOM05D007302 ORTHO05D009191 2.7e-44 182.2 113 85.8
Glyma.15G268700 Glycine max HOM05D007302 ORTHO05D009191 4.6e-44 181.4 116 82.8
Cpa.g.sc189.6 Carica papaya HOM05D007302 ORTHO05D009191 6.0e-44 181.0 117 82.1
Manes.10G151800 Manihot esculenta HOM05D007302 ORTHO05D009191 7.9e-44 180.6 130 78.5
MBI08_g23101_MAGBIO Magnolia biondii HOM05D007302 ORTHO05D009191 2.3e-43 179.1 130 74.6
FvH4_7g00100 Fragaria vesca HOM05D007302 ORTHO05D009191 3.0e-43 178.7 106 89.6
TWI09G1618 Tripterygium wilfordii HOM05D007302 ORTHO05D009191 3.0e-43 178.7 117 82.1
VMungo1080G0568 Vigna mungo HOM05D007302 ORTHO05D009191 3.0e-43 178.7 117 81.2
Ciclev10033063m.g Citrus clementina HOM05D007302 ORTHO05D009191 1.1e-42 176.8 117 80.3
TAR369G0332 Trochodendron aralioides HOM05D007302 ORTHO05D009191 1.9e-42 176.0 116 79.3
TAR369G0850 Trochodendron aralioides HOM05D007302 ORTHO05D009191 1.9e-42 176.0 116 79.3
Eucgr.G03411 Eucalyptus grandis HOM05D007302 ORTHO05D009191 4.3e-42 174.9 119 78.2
Potri.001G230100 Populus trichocarpa HOM05D007302 ORTHO05D009191 9.6e-42 173.7 117 79.5
Medtr2g061420 Medicago truncatula HOM05D007302 ORTHO05D009191 1.3e-41 173.3 126 74.6
QL04p001298 Quercus lobata HOM05D007302 ORTHO05D009191 1.3e-41 173.3 141 70.9
Atru.chr11.2701 Acer truncatum HOM05D007302 ORTHO05D009191 1.6e-41 172.9 126 75.4
Sed0011752 Sechium edule HOM05D007302 ORTHO05D009191 1.6e-41 172.9 123 74.0
Lalb_Chr25g0283591 Lupinus albus HOM05D007302 ORTHO05D009191 2.1e-41 172.6 117 79.5
TPR.G16161 Trifolium pratense HOM05D007302 ORTHO05D009191 2.1e-41 172.6 134 74.6
Phvul.005G041100 Phaseolus vulgaris HOM05D007302 ORTHO05D009191 2.8e-41 172.2 117 77.8
Psat1g127480 Pisum sativum HOM05D007302 ORTHO05D009191 3.7e-41 171.8 126 74.6
Actinidia05847 Actinidia chinensis HOM05D007302 ORTHO05D009191 4.8e-41 171.4 115 79.1
CsaV3_7G031460 Cucumis sativus L. HOM05D007302 ORTHO05D009191 4.8e-41 171.4 119 76.5
Ca_02882_v3 Cicer arietinum L. HOM05D007302 ORTHO05D009191 8.1e-41 170.6 126 73.0
GSVIVG01001360001 Vitis vinifera HOM05D007302 ORTHO05D009191 1.1e-40 170.2 118 77.1
DCAR_015712 Daucus carota HOM05D007302 ORTHO05D009191 1.4e-40 169.9 123 76.4
FAN06G3306 Fragaria x ananassa HOM05D007302 ORTHO05D009191 2.4e-40 169.1 108 83.3
Lj3g0023486 Lotus japonicus HOM05D007302 ORTHO05D009191 3.1e-40 168.7 116 76.7
Lj6g0025867 Lotus japonicus HOM05D007302 ORTHO05D009191 3.1e-40 168.7 116 76.7
CiPaw.16G067000 Carya illinoinensis HOM05D007302 ORTHO05D009191 5.3e-40 167.9 107 84.1
arahy.Tifrunner.gnm1.ann1.Z7X15P Arachis hypogaea HOM05D007302 ORTHO05D009191 9.0e-40 167.2 121 75.2
Gohir.D08G037201 Gossypium hirsutum HOM05D007302 ORTHO05D009191 9.0e-40 167.2 125 74.4
Gorai.004G035200 Gossypium raimondii HOM05D007302 ORTHO05D009191 9.0e-40 167.2 125 74.4
arahy.Tifrunner.gnm1.ann1.5U19IL Arachis hypogaea HOM05D007302 ORTHO05D009191 1.2e-39 166.8 129 72.9
FAN10G3108 Fragaria x ananassa HOM05D007302 ORTHO05D009191 1.2e-39 166.8 108 82.4
Sopen10g014540 Solanum pennellii HOM05D007302 ORTHO05D009191 1.2e-39 166.8 117 75.2
MSTRG.28098 Avicennia marina HOM05D007302 ORTHO05D009191 2.0e-39 166.0 119 77.3
PSO384G4593 Papaver somniferum HOM05D007302 ORTHO05D009191 2.0e-39 166.0 116 77.6
PSO339G0269 Papaver somniferum HOM05D007302 ORTHO05D009191 2.6e-39 165.6 116 77.6
Thecc.01G416400 Theobroma cacao HOM05D007302 ORTHO05D009191 2.6e-39 165.6 133 73.7
ClCG09G003750 Citrullus lanatus HOM05D007302 ORTHO05D009191 7.6e-39 164.1 134 71.6
Actinidia31711 Actinidia chinensis HOM05D007302 ORTHO05D009191 1.3e-38 163.3 115 74.8
Migut.N01659 Erythranthe guttata HOM05D007302 ORTHO05D009191 1.3e-38 163.3 113 75.2
Migut.O00474 Erythranthe guttata HOM05D007302 ORTHO05D009191 1.3e-38 163.3 113 75.2
Nn2g15684 Nelumbo nucifera HOM05D007302 ORTHO05D009191 1.7e-38 162.9 120 72.5
vmacro13612 Vaccinium macrocarpon HOM05D007302 ORTHO05D009191 1.7e-38 162.9 114 76.3
PGSC0003DMG400028766 Solanum tuberosum HOM05D007302 ORTHO05D009191 2.2e-38 162.5 119 73.1
Solyc10g045350.2 Solanum lycopersicum HOM05D007302 ORTHO05D009191 2.9e-38 162.2 117 74.4
Duzib268G0295 Durio zibethinus HOM05D007302 ORTHO05D009191 6.4e-38 161.0 127 74.0
MELO3C023508.2 Cucumis melo HOM05D007302 ORTHO05D009191 8.4e-38 160.6 146 63.7
Cc02_g26960 Coffea canephora HOM05D007302 ORTHO05D009191 1.1e-37 160.2 129 72.1
Gohir.A08G026680 Gossypium hirsutum HOM05D007302 ORTHO05D009191 1.9e-37 159.5 126 72.2
Lsat_1_v5_gn_1_87261 Lactuca sativa HOM05D007302 ORTHO05D009191 2.4e-37 159.1 120 73.3
Peaxi162Scf00245g01315 Petunia axillaris HOM05D007302 ORTHO05D009191 3.2e-37 158.7 113 74.3
SalBow4G1665 Salvia bowleyana HOM05D007302 ORTHO05D009191 9.3e-37 157.1 119 73.9
SalBow4G2255 Salvia bowleyana HOM05D007302 ORTHO05D009191 9.3e-37 157.1 119 73.9
Rhsim07G0050000 Rhododendron simsii HOM05D007302 ORTHO05D009191 1.6e-36 156.4 114 74.6
Aqoxy1G00038 Aquilegia oxysepala HOM05D003342 ORTHO05D003861 2.1e-36 156.0 112 74.1
ECA248G3756 Erigeron canadensis HOM05D007302 ORTHO05D009191 4.6e-36 154.8 122 68.9
Nn7g36009 Nelumbo nucifera HOM05D007302 ORTHO05D009191 1.0e-35 153.7 114 72.8
Sc11g0006270 Simmondsia chinensis HOM05D007302 ORTHO05D009191 1.1e-34 150.2 118 68.6
CSS0001542 Camellia sinensis var. sinensis HOM05D007302 ORTHO05D009191 1.9e-34 149.4 101 80.2
unitig_736.g22290 Utricularia gibba HOM05D007302 ORTHO05D009191 1.9e-34 149.4 130 66.2
CSS0004707 Camellia sinensis var. sinensis HOM05D007302 ORTHO05D009191 3.3e-34 148.7 101 80.2
Sabra16G0137900 Salix brachista HOM05D007302 ORTHO05D009191 3.3e-34 148.7 111 74.8
HanXRQChr15g0480631 Helianthus annuus HOM05D007302 ORTHO05D009191 4.3e-34 148.3 120 70.8
Actinidia25680 Actinidia chinensis HOM05D007302 ORTHO05D009191 7.4e-34 147.5 102 74.5
CDE07G1496 Ceratophyllum demersum HOM05D007302 ORTHO05D009191 6.9e-32 141.0 133 57.9
Hund06578 Selenicereus undatus HOM05D007302 ORTHO05D009191 2.9e-30 135.6 120 61.7
SGA_v2.0_scaffold95G28773 Striga asiatica HOM05D007302 ORTHO05D009191 4.9e-30 134.8 119 67.2
ATR0807G228 Amborella trichopoda HOM05D007302 ORTHO05D009191 9.3e-29 130.6 102 67.6
EL10Ac9g21938 Beta vulgaris HOM05D007302 ORTHO05D009191 1.8e-27 126.3 110 64.5
Dinv43937 Davidia involucrata HOM05D007302 ORTHO05D009191 1.5e-26 123.2 129 59.7
COL.COLO4_25061 Corchorus olitorius HOM05D007302 ORTHO05D009191 4.3e-26 121.7 119 64.7
CSS0017005 Camellia sinensis var. sinensis HOM05D007302 ORTHO05D009191 9.7e-26 120.6 112 61.6
SEGI_27997 Sequoiadendron giganteum HOM05D007302 ORTHO05D009191 2.8e-25 119.0 119 57.1
AUR62011558 Chenopodium quinoa HOM05D007302 ORTHO05D009191 1.2e-23 113.6 101 62.4
HPP92_022445 Vanilla planifolia HOM05D007302 ORTHO05D009191 1.5e-23 113.2 85 71.8
AUR62016377 Chenopodium quinoa HOM05D007302 ORTHO05D009191 4.5e-23 111.7 101 62.4
CSS0014571 Camellia sinensis var. sinensis HOM05D007302 ORTHO05D009191 2.7e-20 102.4 109 56.0
Pp3c17_19080 Physcomitrium patens HOM05D007302 ORTHO05D009191 3.0e-19 99.0 114 47.4
Oeu003126.2 Olea europaea HOM05D007302 ORTHO05D009191 3.7e-17 92.0 64 71.9
DCAR_024994 Daucus carota HOM05D007302 ORTHO05D009191 2.4e-16 89.4 108 53.7
CBR_g22319 Chara braunii HOM05D000019 ORTHO05D000048 2.6e-15 85.9 102 42.2
Mapoly0007s0266 Marchantia polymorpha HOM05D007302 ORTHO05D009191 1.0e-14 84.0 100 48.0
Os09g0553800 Oryza sativa ssp. japonica HOM05D007302 ORTHO05D009191 3.8e-14 82.0 64 64.1
MD05G1005700 Malus domestica HOM05D007302 ORTHO05D009191 1.4e-13 80.1 51 82.4
BcaB01g03316 Brassica carinata HOM05D007302 ORTHO05D009191 6.3e-09 64.7 51 70.6
MD15G1336100 Malus domestica HOM05D007302 ORTHO05D009191 3.1e-08 62.4 54 59.3


User provided reference genes

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