Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT2G43745 Arabidopsis thaliana HOM05D008029 ORTHO05D003588 3.6e-73 278.1 137 100.0
AL4G42610 Arabidopsis lyrata HOM05D008029 ORTHO05D003588 2.7e-36 155.6 93 84.9
CARHR099610 Cardamine hirsuta HOM05D008029 ORTHO05D003588 3.9e-27 125.2 84 73.8
BraA03t11653Z Brassica rapa HOM05D008029 ORTHO05D003588 5.7e-18 94.7 92 55.4
A03p24440 Brassica napus HOM05D008029 ORTHO05D003588 4.8e-17 91.7 92 54.3
Sp7g10340 Schrenkiella parvula HOM05D008029 ORTHO05D003588 1.2e-15 87.0 91 57.1
Thhalv10001732m.g Eutrema salsugineum HOM05D008029 ORTHO05D003588 2.0e-15 86.3 91 54.9
A05p03950 Brassica napus HOM05D008029 ORTHO05D003588 1.2e-12 77.0 101 48.5
A03p46150 Brassica napus HOM05D008029 ORTHO05D003588 1.6e-12 76.6 101 48.5
BraA05t19383Z Brassica rapa HOM05D008029 ORTHO05D003588 3.6e-12 75.5 94 48.9
BcaC02g07152 Brassica carinata HOM05D008029 ORTHO05D003588 4.7e-12 75.1 91 52.7
BolC4t28574H Brassica oleracea HOM05D008029 ORTHO05D003588 4.7e-12 75.1 91 52.7
AL4G42570 Arabidopsis lyrata HOM05D008029 ORTHO05D003588 6.1e-12 74.7 91 45.1
BraA05t19382Z Brassica rapa HOM05D008029 ORTHO05D003588 8.0e-12 74.3 98 49.0
C04p70740 Brassica napus HOM05D008029 ORTHO05D003588 1.0e-11 73.9 63 63.5
CARHR050270 Cardamine hirsuta HOM05D008029 ORTHO05D003588 1.0e-11 73.9 64 57.8
BolC4t28575H Brassica oleracea HOM05D008029 ORTHO05D003588 1.8e-11 73.2 91 50.5
A04p33040 Brassica napus HOM05D008029 ORTHO05D003588 6.8e-11 71.2 91 48.4
BcaC01g05215 Brassica carinata HOM05D008029 ORTHO05D003588 8.8e-11 70.9 83 51.8
C03p29140 Brassica napus HOM05D008029 ORTHO05D003588 8.8e-11 70.9 83 51.8
BolC4t22100H Brassica oleracea HOM05D008029 ORTHO05D003588 8.8e-11 70.9 94 46.8
BolC3t15266H Brassica oleracea HOM05D008029 ORTHO05D003588 1.5e-10 70.1 82 52.4
BraA04t18763Z Brassica rapa HOM05D008029 ORTHO05D003588 2.6e-10 69.3 91 48.4
A05p03940 Brassica napus HOM05D008029 ORTHO05D003588 4.4e-10 68.6 99 43.4
Thhalv10010901m.g Eutrema salsugineum HOM05D008029 ORTHO05D003588 2.2e-09 66.2 83 48.2
BcaB01g03363 Brassica carinata HOM05D008029 ORTHO05D003588 1.4e-08 63.5 76 50.0
C04p70730 Brassica napus HOM05D008029 ORTHO05D016094 2.0e-07 59.7 66 50.0
BolC4t28573H Brassica oleracea HOM05D008029 ORTHO05D016094 1.3e-06 57.0 72 45.8
AL4G42580 Arabidopsis lyrata HOM05D008029 ORTHO05D003588 2.9e-06 55.8 71 42.3
MSTRG.21770 Avicennia marina HOM05D000862 ORTHO05D003588 3.8e-06 55.5 63 47.6
Carub.0004s2627 Capsella rubella HOM05D008029 ORTHO05D003588 5.0e-06 55.1 61 49.2


User provided reference genes

Program Settings