Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT2G43550 Arabidopsis thaliana HOM05D007394 ORTHO05D015383 3.5e-48 194.5 90 100.0
AL4G42350 Arabidopsis lyrata HOM05D007394 ORTHO05D015383 8.9e-44 179.9 90 94.4
CARHR138680 Cardamine hirsuta HOM05D007394 ORTHO05D015383 1.2e-40 169.5 90 87.8
Carub.0004s2603 Capsella rubella HOM05D007394 ORTHO05D015383 1.6e-40 169.1 90 88.9
BcaB06g29326 Brassica carinata HOM05D007394 ORTHO05D015383 1.3e-34 149.4 91 80.2
A04p32830 Brassica napus HOM05D007394 ORTHO05D015383 1.3e-34 149.4 91 80.2
BraA04t18745Z Brassica rapa HOM05D007394 ORTHO05D015383 1.3e-34 149.4 91 80.2
BcaC02g07166 Brassica carinata HOM05D007394 ORTHO05D015383 1.7e-34 149.1 91 80.2
BolC4t28555H Brassica oleracea HOM05D007394 ORTHO05D015383 1.7e-34 149.1 91 80.2
Thhalv10001696m.g Eutrema salsugineum HOM05D007394 ORTHO05D015383 6.4e-34 147.1 87 80.5
C04p70540 Brassica napus HOM05D007394 ORTHO05D015383 8.3e-34 146.7 91 79.1
Sp4g25660 Schrenkiella parvula HOM05D007394 ORTHO05D015383 1.2e-32 142.9 91 75.8
Aa31LG1G25280 Aethionema arabicum HOM05D007459 ORTHO05D009234 1.3e-31 139.4 77 79.2
Thhalv10001701m.g Eutrema salsugineum HOM05D007394 ORTHO05D032247 1.6e-29 132.5 90 75.6
BcaB06g29325 Brassica carinata HOM05D007394 ORTHO05D032247 2.4e-25 118.6 88 68.2
BcaC02g07167 Brassica carinata HOM05D007394 ORTHO05D032247 9.2e-25 116.7 88 67.0
BcaB02g08934 Brassica carinata HOM05D007394 ORTHO05D009996 4.9e-18 94.4 88 53.4
Thhalv10001746m.g Eutrema salsugineum HOM05D007394 ORTHO05D009996 4.9e-18 94.4 88 53.4
A05p03820 Brassica napus HOM05D007394 ORTHO05D009996 8.4e-18 93.6 88 53.4
AT2G43510 Arabidopsis thaliana HOM05D007394 ORTHO05D009996 1.1e-17 93.2 85 52.9
Sp4g25600 Schrenkiella parvula HOM05D007394 ORTHO05D009996 1.4e-17 92.8 88 51.1
THA.LOC104803941 Tarenaya hassleriana HOM05D007394 ORTHO05D009996 1.4e-17 92.8 89 53.9
AL2G24960 Arabidopsis lyrata HOM05D007394 ORTHO05D009996 1.9e-17 92.4 87 52.9
BcaC02g12386 Brassica carinata HOM05D007394 ORTHO05D009996 1.9e-17 92.4 88 52.3
C04p04520 Brassica napus HOM05D007394 ORTHO05D009996 1.9e-17 92.4 88 52.3
CARHR138620 Cardamine hirsuta HOM05D007394 ORTHO05D009996 4.2e-17 91.3 90 51.1
AL4G42300 Arabidopsis lyrata HOM05D007394 ORTHO05D009996 5.4e-17 90.9 85 52.9
Carub.0004s2598 Capsella rubella HOM05D007394 ORTHO05D009996 7.1e-17 90.5 88 54.5
CARHR138610 Cardamine hirsuta HOM05D007394 ORTHO05D009996 1.2e-16 89.7 89 52.8
THA.LOC104803932 Tarenaya hassleriana HOM05D007394 ORTHO05D009996 1.2e-16 89.7 89 52.8
BcaC02g12382 Brassica carinata HOM05D007394 ORTHO05D009996 1.6e-16 89.4 88 50.0
C04p04550 Brassica napus HOM05D007394 ORTHO05D009996 1.6e-16 89.4 88 50.0
Sp4g25610 Schrenkiella parvula HOM05D007394 ORTHO05D009996 2.1e-16 89.0 87 50.6
AL1G53780 Arabidopsis lyrata HOM05D007394 ORTHO05D009996 3.5e-16 88.2 89 50.6
BcaB02g08929 Brassica carinata HOM05D007394 ORTHO05D009996 3.5e-16 88.2 88 51.1
A05p03830 Brassica napus HOM05D007394 ORTHO05D009996 4.6e-16 87.8 87 49.4
Sp3g24200 Schrenkiella parvula HOM05D007394 ORTHO05D009996 4.6e-16 87.8 88 52.3
AT1G47540 Arabidopsis thaliana HOM05D007394 ORTHO05D009996 6.0e-16 87.4 89 49.4
BcaC02g12384 Brassica carinata HOM05D007394 ORTHO05D009996 7.8e-16 87.0 88 51.1
C04p04540 Brassica napus HOM05D007394 ORTHO05D009996 7.8e-16 87.0 88 51.1
BolC4t22087H Brassica oleracea HOM05D007394 ORTHO05D009996 7.8e-16 87.0 88 51.1
BcaB02g08930 Brassica carinata HOM05D007394 ORTHO05D009996 1.0e-15 86.7 92 47.8
Carub.0004s2597 Capsella rubella HOM05D007394 ORTHO05D009996 1.0e-15 86.7 88 50.0
AL8G26520 Arabidopsis lyrata HOM05D007394 ORTHO05D009996 1.3e-15 86.3 84 53.6
BraA05t19371Z Brassica rapa HOM05D007394 ORTHO05D009996 3.0e-15 85.1 88 51.1
BcaB02g08928 Brassica carinata HOM05D007394 ORTHO05D009996 3.9e-15 84.7 88 51.1
A04p32810 Brassica napus HOM05D007394 ORTHO05D009996 3.9e-15 84.7 88 47.7
BraA04t18743Z Brassica rapa HOM05D007394 ORTHO05D009996 3.9e-15 84.7 88 47.7
A05p03840 Brassica napus HOM05D007394 ORTHO05D009996 5.1e-15 84.3 88 51.1
THA.LOC104798701 Tarenaya hassleriana HOM05D007394 ORTHO05D009996 5.1e-15 84.3 88 50.0
BcaB06g29320 Brassica carinata HOM05D007394 ORTHO05D009996 8.7e-15 83.6 88 50.0
BcaC02g12378 Brassica carinata HOM05D007394 ORTHO05D009996 1.1e-14 83.2 87 47.1
CARHR138630 Cardamine hirsuta HOM05D007394 ORTHO05D009996 1.9e-14 82.4 88 46.6
Thhalv10001697m.g Eutrema salsugineum HOM05D007394 ORTHO05D009996 1.9e-14 82.4 87 47.1
Aa31LG1G25260 Aethionema arabicum HOM05D007394 ORTHO05D009996 2.5e-14 82.0 69 58.0
A03p24290 Brassica napus HOM05D007394 ORTHO05D009996 2.5e-14 82.0 88 46.6
A04p32790 Brassica napus HOM05D007394 ORTHO05D009996 2.5e-14 82.0 88 46.6
C04p70530 Brassica napus HOM05D007394 ORTHO05D009996 2.5e-14 82.0 88 46.6
BraA03t11637Z Brassica rapa HOM05D007394 ORTHO05D009996 2.5e-14 82.0 88 46.6
BraA03t11639Z Brassica rapa HOM05D007394 ORTHO05D009996 2.5e-14 82.0 88 46.6
THA.LOC109116252 Tarenaya hassleriana HOM05D007394 ORTHO05D009996 2.5e-14 82.0 88 47.7
C04p70500 Brassica napus HOM05D007394 ORTHO05D009996 3.3e-14 81.6 88 46.6
BcaB02g10434 Brassica carinata HOM05D007394 ORTHO05D009996 4.3e-14 81.3 88 50.0
AL4G42310 Arabidopsis lyrata HOM05D007394 ORTHO05D009996 5.6e-14 80.9 88 48.9
AT2G43520 Arabidopsis thaliana HOM05D007394 ORTHO05D009996 5.6e-14 80.9 89 48.3
BolC4t28552H Brassica oleracea HOM05D007394 ORTHO05D009996 5.6e-14 80.9 88 46.6
BraA03t11638Z Brassica rapa HOM05D007394 ORTHO05D009996 5.6e-14 80.9 87 46.0
BraA05t19373Z Brassica rapa HOM05D007394 ORTHO05D009996 5.6e-14 80.9 88 43.2
AT2G43535 Arabidopsis thaliana HOM05D007394 ORTHO05D009996 7.3e-14 80.5 71 53.5
A04p32800 Brassica napus HOM05D007394 ORTHO05D009996 7.3e-14 80.5 87 46.0
BraA04t18742Z Brassica rapa HOM05D007394 ORTHO05D009996 7.3e-14 80.5 87 46.0
C04p04590 Brassica napus HOM05D007394 ORTHO05D009996 9.6e-14 80.1 87 43.7
A03p24300 Brassica napus HOM05D007394 ORTHO05D009996 1.6e-13 79.3 87 44.8
BraA03t11640Z Brassica rapa HOM05D007394 ORTHO05D009996 1.6e-13 79.3 87 44.8
CARHR138640 Cardamine hirsuta HOM05D007394 ORTHO05D009996 1.6e-13 79.3 87 41.4
BcaC02g12381 Brassica carinata HOM05D007394 ORTHO05D009996 2.1e-13 79.0 89 50.6
BolC4t22090H Brassica oleracea HOM05D007394 ORTHO05D009996 2.8e-13 78.6 87 42.5
Carub.0004s2602 Capsella rubella HOM05D007394 ORTHO05D009996 4.7e-13 77.8 88 45.5
Aa31LG1G24860 Aethionema arabicum HOM05D007394 ORTHO05D009996 8.1e-13 77.0 68 55.9
AL4G42320 Arabidopsis lyrata HOM05D007394 ORTHO05D009996 1.4e-12 76.3 94 43.6
BcaC02g07171 Brassica carinata HOM05D007394 ORTHO05D009996 1.4e-12 76.3 91 41.8
Sp3g24100 Schrenkiella parvula HOM05D007394 ORTHO05D009996 1.4e-12 76.3 90 42.2
CARHR138650 Cardamine hirsuta HOM05D007394 ORTHO05D009996 1.8e-12 75.9 88 44.3
BcaC02g07172 Brassica carinata HOM05D007394 ORTHO05D009996 5.3e-12 74.3 67 46.3
BcaB01g03378 Brassica carinata HOM05D007394 ORTHO05D009996 9.0e-12 73.6 78 47.4
BcaB06g29322 Brassica carinata HOM05D007394 ORTHO05D009996 9.0e-12 73.6 64 48.4
BcaC01g05230 Brassica carinata HOM05D007394 ORTHO05D009996 9.0e-12 73.6 88 46.6
BcaB06g29321 Brassica carinata HOM05D007394 ORTHO05D009996 2.6e-11 72.0 64 46.9
BcaC02g07168 Brassica carinata HOM05D007459 ORTHO05D009234 2.6e-11 72.0 72 51.4
Carub.0002s0551 Capsella rubella HOM05D007394 ORTHO05D009996 2.6e-11 72.0 87 40.2
Carub.0004s2599 Capsella rubella HOM05D007394 ORTHO05D009996 4.4e-11 71.2 87 41.4
AT2G43530 Arabidopsis thaliana HOM05D007394 ORTHO05D009996 7.6e-11 70.5 88 46.6
THA.LOC104805814 Tarenaya hassleriana HOM05D007394 ORTHO05D009996 1.7e-10 69.3 87 42.5
BolC3t15251H Brassica oleracea HOM05D007394 ORTHO05D009996 4.2e-09 64.7 70 48.6
BcaB06g29323 Brassica carinata HOM05D007394 ORTHO05D009996 5.4e-09 64.3 70 44.3
THA.LOC104803922 Tarenaya hassleriana HOM05D007394 ORTHO05D009996 7.1e-09 63.9 88 44.3
Sp4g02290 Schrenkiella parvula HOM05D007394 ORTHO05D009234 1.2e-08 63.2 95 38.9
THA.LOC104803915 Tarenaya hassleriana HOM05D007394 ORTHO05D009996 2.7e-08 62.0 87 44.8
Carub.0004s2601 Capsella rubella HOM05D007394 ORTHO05D009996 4.6e-08 61.2 68 41.2
Carub.0004s2604 Capsella rubella HOM05D007394 ORTHO05D009996 3.0e-07 58.5 84 41.7


User provided reference genes

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