Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT2G43535 Arabidopsis thaliana HOM05D007394 ORTHO05D009996 2.7e-46 188.3 98 100.0
Sp4g25610 Schrenkiella parvula HOM05D007394 ORTHO05D009996 1.4e-31 139.4 74 74.3
BcaB02g08929 Brassica carinata HOM05D007394 ORTHO05D009996 3.0e-29 131.7 75 70.7
Thhalv10001746m.g Eutrema salsugineum HOM05D007394 ORTHO05D009996 3.9e-29 131.3 67 74.6
AL4G42320 Arabidopsis lyrata HOM05D007394 ORTHO05D009996 5.1e-29 131.0 83 73.5
Sp4g25600 Schrenkiella parvula HOM05D007394 ORTHO05D009996 1.3e-27 126.3 67 71.6
BcaB06g29322 Brassica carinata HOM05D007394 ORTHO05D009996 2.2e-27 125.6 73 67.1
CARHR138610 Cardamine hirsuta HOM05D007394 ORTHO05D009996 2.8e-27 125.2 66 74.2
BcaB06g29321 Brassica carinata HOM05D007394 ORTHO05D009996 6.3e-27 124.0 73 65.8
Carub.0004s2597 Capsella rubella HOM05D007394 ORTHO05D009996 6.3e-27 124.0 84 58.3
C04p70500 Brassica napus HOM05D007394 ORTHO05D009996 8.2e-27 123.6 67 71.6
AT2G43510 Arabidopsis thaliana HOM05D007394 ORTHO05D009996 1.1e-26 123.2 66 71.2
BcaC02g07172 Brassica carinata HOM05D007394 ORTHO05D009996 7.0e-26 120.6 66 71.2
Sp3g24100 Schrenkiella parvula HOM05D007394 ORTHO05D009996 9.1e-26 120.2 70 70.0
A04p32790 Brassica napus HOM05D007394 ORTHO05D009996 1.2e-25 119.8 68 73.5
CARHR138620 Cardamine hirsuta HOM05D007394 ORTHO05D009996 1.2e-25 119.8 71 67.6
A04p32800 Brassica napus HOM05D007394 ORTHO05D009996 1.5e-25 119.4 74 62.2
A05p03820 Brassica napus HOM05D007394 ORTHO05D009996 1.5e-25 119.4 67 65.7
A05p03830 Brassica napus HOM05D007394 ORTHO05D009996 1.5e-25 119.4 66 72.7
BraA04t18742Z Brassica rapa HOM05D007394 ORTHO05D009996 1.5e-25 119.4 74 62.2
BcaC02g12386 Brassica carinata HOM05D007394 ORTHO05D009996 2.0e-25 119.0 67 65.7
C04p04520 Brassica napus HOM05D007394 ORTHO05D009996 2.0e-25 119.0 67 65.7
AL2G24960 Arabidopsis lyrata HOM05D007394 ORTHO05D009996 2.6e-25 118.6 66 71.2
AL4G42300 Arabidopsis lyrata HOM05D007394 ORTHO05D009996 5.9e-25 117.5 66 68.2
BcaB02g08934 Brassica carinata HOM05D007394 ORTHO05D009996 7.7e-25 117.1 67 64.2
BcaB02g10434 Brassica carinata HOM05D007394 ORTHO05D009996 1.0e-24 116.7 66 66.7
BraA05t19373Z Brassica rapa HOM05D007394 ORTHO05D009996 1.0e-24 116.7 96 52.1
Carub.0004s2602 Capsella rubella HOM05D007394 ORTHO05D009996 1.7e-24 115.9 68 64.7
BcaC02g12382 Brassica carinata HOM05D007394 ORTHO05D009996 2.2e-24 115.5 76 61.8
BcaC02g12384 Brassica carinata HOM05D007394 ORTHO05D009996 2.2e-24 115.5 67 62.7
C04p04540 Brassica napus HOM05D007394 ORTHO05D009996 2.2e-24 115.5 67 62.7
C04p04550 Brassica napus HOM05D007394 ORTHO05D009996 2.2e-24 115.5 76 61.8
C04p04590 Brassica napus HOM05D007394 ORTHO05D009996 2.2e-24 115.5 96 51.0
BolC4t22087H Brassica oleracea HOM05D007394 ORTHO05D009996 2.2e-24 115.5 67 62.7
BolC4t22090H Brassica oleracea HOM05D007394 ORTHO05D009996 2.2e-24 115.5 96 51.0
BcaC02g12378 Brassica carinata HOM05D007394 ORTHO05D009996 3.8e-24 114.8 75 60.0
Carub.0004s2599 Capsella rubella HOM05D007394 ORTHO05D009996 5.0e-24 114.4 67 65.7
A05p03840 Brassica napus HOM05D007394 ORTHO05D009996 6.5e-24 114.0 75 62.7
BraA05t19371Z Brassica rapa HOM05D007394 ORTHO05D009996 6.5e-24 114.0 75 62.7
AT1G47540 Arabidopsis thaliana HOM05D007394 ORTHO05D009996 8.5e-24 113.6 76 63.2
BcaB02g08928 Brassica carinata HOM05D007394 ORTHO05D009996 8.5e-24 113.6 75 62.7
BcaC02g12381 Brassica carinata HOM05D007394 ORTHO05D009996 8.5e-24 113.6 75 62.7
THA.LOC104803932 Tarenaya hassleriana HOM05D007394 ORTHO05D009996 3.2e-23 111.7 67 67.2
AL1G53780 Arabidopsis lyrata HOM05D007394 ORTHO05D009996 4.2e-23 111.3 76 61.8
A03p24300 Brassica napus HOM05D007394 ORTHO05D009996 5.5e-23 110.9 66 66.7
BraA03t11640Z Brassica rapa HOM05D007394 ORTHO05D009996 5.5e-23 110.9 66 66.7
BcaB06g29320 Brassica carinata HOM05D007394 ORTHO05D009996 1.2e-22 109.8 67 68.7
BraA03t11638Z Brassica rapa HOM05D007394 ORTHO05D009996 1.6e-22 109.4 66 65.2
BcaB02g08930 Brassica carinata HOM05D007394 ORTHO05D009996 2.1e-22 109.0 78 61.5
Aa31LG1G25280 Aethionema arabicum HOM05D007459 ORTHO05D009234 3.6e-22 108.2 65 66.2
A04p32810 Brassica napus HOM05D007394 ORTHO05D009996 3.6e-22 108.2 77 59.7
BraA04t18743Z Brassica rapa HOM05D007394 ORTHO05D009996 3.6e-22 108.2 77 59.7
BcaB06g29323 Brassica carinata HOM05D007394 ORTHO05D009996 4.7e-22 107.8 67 65.7
THA.LOC104803941 Tarenaya hassleriana HOM05D007394 ORTHO05D009996 4.7e-22 107.8 67 65.7
Aa31LG1G25260 Aethionema arabicum HOM05D007394 ORTHO05D009996 6.1e-22 107.5 66 65.2
AL4G42310 Arabidopsis lyrata HOM05D007394 ORTHO05D009996 1.0e-21 106.7 69 62.3
BcaB01g03378 Brassica carinata HOM05D007394 ORTHO05D009996 2.3e-21 105.5 69 62.3
Carub.0004s2598 Capsella rubella HOM05D007394 ORTHO05D009996 3.0e-21 105.1 69 62.3
Aa31LG1G24860 Aethionema arabicum HOM05D007394 ORTHO05D009996 5.2e-21 104.4 64 65.6
AT2G43520 Arabidopsis thaliana HOM05D007394 ORTHO05D009996 5.2e-21 104.4 69 60.9
C04p70530 Brassica napus HOM05D007394 ORTHO05D009996 8.8e-21 103.6 77 57.1
A03p24290 Brassica napus HOM05D007394 ORTHO05D009996 1.1e-20 103.2 90 50.0
BraA03t11637Z Brassica rapa HOM05D007394 ORTHO05D009996 1.1e-20 103.2 90 50.0
BraA03t11639Z Brassica rapa HOM05D007394 ORTHO05D009996 1.1e-20 103.2 90 50.0
CARHR138640 Cardamine hirsuta HOM05D007394 ORTHO05D009996 1.1e-20 103.2 70 58.6
Carub.0002s0551 Capsella rubella HOM05D007394 ORTHO05D009996 1.5e-20 102.8 69 59.4
BcaC01g05230 Brassica carinata HOM05D007394 ORTHO05D009996 2.6e-20 102.1 67 64.2
BolC4t28552H Brassica oleracea HOM05D007394 ORTHO05D009996 4.4e-20 101.3 77 55.8
CARHR138630 Cardamine hirsuta HOM05D007394 ORTHO05D009996 5.7e-20 100.9 72 56.9
THA.LOC109116252 Tarenaya hassleriana HOM05D007394 ORTHO05D009996 9.7e-20 100.1 66 62.1
AL8G26520 Arabidopsis lyrata HOM05D007394 ORTHO05D009996 1.3e-19 99.8 72 58.3
Thhalv10001697m.g Eutrema salsugineum HOM05D007394 ORTHO05D009996 1.7e-19 99.4 61 65.6
Sp3g24200 Schrenkiella parvula HOM05D007394 ORTHO05D009996 2.8e-19 98.6 91 51.6
THA.LOC104798701 Tarenaya hassleriana HOM05D007394 ORTHO05D009996 6.3e-19 97.4 66 60.6
BcaC02g07171 Brassica carinata HOM05D007394 ORTHO05D009996 1.1e-18 96.7 82 52.4
THA.LOC104805814 Tarenaya hassleriana HOM05D007394 ORTHO05D009996 1.7e-16 89.4 89 46.1
Sp4g25660 Schrenkiella parvula HOM05D007394 ORTHO05D015383 2.7e-14 82.0 68 52.9
AL4G42350 Arabidopsis lyrata HOM05D007394 ORTHO05D015383 4.7e-14 81.3 88 46.6
AT2G43550 Arabidopsis thaliana HOM05D007394 ORTHO05D015383 4.7e-14 81.3 71 53.5
BcaC02g07168 Brassica carinata HOM05D007459 ORTHO05D009234 4.7e-14 81.3 56 58.9
BolC3t15251H Brassica oleracea HOM05D007394 ORTHO05D009996 4.7e-14 81.3 50 66.0
BcaB06g29326 Brassica carinata HOM05D007394 ORTHO05D015383 6.1e-14 80.9 58 55.2
BcaC02g07166 Brassica carinata HOM05D007394 ORTHO05D015383 6.1e-14 80.9 58 55.2
A04p32830 Brassica napus HOM05D007394 ORTHO05D015383 6.1e-14 80.9 58 55.2
BolC4t28555H Brassica oleracea HOM05D007394 ORTHO05D015383 6.1e-14 80.9 58 55.2
BraA04t18745Z Brassica rapa HOM05D007394 ORTHO05D015383 6.1e-14 80.9 58 55.2
Thhalv10001696m.g Eutrema salsugineum HOM05D007394 ORTHO05D015383 6.1e-14 80.9 58 55.2
Carub.0004s2603 Capsella rubella HOM05D007394 ORTHO05D015383 1.0e-13 80.1 88 45.5
AT2G43530 Arabidopsis thaliana HOM05D007394 ORTHO05D009996 1.8e-13 79.3 69 52.2
C04p70540 Brassica napus HOM05D007394 ORTHO05D015383 1.8e-13 79.3 58 55.2
CARHR138680 Cardamine hirsuta HOM05D007394 ORTHO05D015383 1.8e-13 79.3 66 53.0
CARHR138650 Cardamine hirsuta HOM05D007394 ORTHO05D009996 8.8e-13 77.0 74 39.2
THA.LOC104803915 Tarenaya hassleriana HOM05D007394 ORTHO05D009996 1.2e-12 76.6 69 49.3
Carub.0004s2604 Capsella rubella HOM05D007394 ORTHO05D009996 1.7e-11 72.8 74 44.6
THA.LOC104803922 Tarenaya hassleriana HOM05D007394 ORTHO05D009996 3.7e-11 71.6 68 47.1
Carub.0004s2601 Capsella rubella HOM05D007394 ORTHO05D009996 1.6e-09 66.2 67 41.8
A04p32770 Brassica napus HOM05D007394 ORTHO05D033140 7.2e-07 57.4 70 45.7
BraA04t18740Z Brassica rapa HOM05D007394 ORTHO05D033140 7.2e-07 57.4 70 45.7


User provided reference genes

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