Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT2G43530 Arabidopsis thaliana HOM05D007394 ORTHO05D009996 1.1e-43 179.5 84 100.0
CARHR138650 Cardamine hirsuta HOM05D007394 ORTHO05D009996 9.9e-21 103.2 83 57.8
Carub.0004s2601 Capsella rubella HOM05D007394 ORTHO05D009996 3.7e-20 101.3 84 63.1
Carub.0004s2598 Capsella rubella HOM05D007394 ORTHO05D009996 6.4e-20 100.5 90 55.6
Sp3g24200 Schrenkiella parvula HOM05D007394 ORTHO05D009996 6.4e-20 100.5 87 55.2
Sp4g25610 Schrenkiella parvula HOM05D007394 ORTHO05D009996 6.4e-20 100.5 89 56.2
AL4G42320 Arabidopsis lyrata HOM05D007394 ORTHO05D009996 1.1e-19 99.8 96 54.2
BcaB02g08929 Brassica carinata HOM05D007394 ORTHO05D009996 1.1e-19 99.8 91 53.8
AL4G42310 Arabidopsis lyrata HOM05D007394 ORTHO05D009996 1.9e-19 99.0 90 55.6
Carub.0004s2604 Capsella rubella HOM05D007394 ORTHO05D009996 1.9e-19 99.0 85 56.5
AT2G43520 Arabidopsis thaliana HOM05D007394 ORTHO05D009996 2.4e-19 98.6 90 55.6
A03p24300 Brassica napus HOM05D007394 ORTHO05D009996 7.1e-19 97.1 89 57.3
BraA03t11640Z Brassica rapa HOM05D007394 ORTHO05D009996 7.1e-19 97.1 89 57.3
BraA03t11638Z Brassica rapa HOM05D007394 ORTHO05D009996 2.1e-18 95.5 89 56.2
Thhalv10001697m.g Eutrema salsugineum HOM05D007394 ORTHO05D009996 2.1e-18 95.5 88 56.8
A03p24290 Brassica napus HOM05D007394 ORTHO05D009996 6.0e-18 94.0 91 53.8
BraA03t11637Z Brassica rapa HOM05D007394 ORTHO05D009996 6.0e-18 94.0 91 53.8
BraA03t11639Z Brassica rapa HOM05D007394 ORTHO05D009996 6.0e-18 94.0 91 53.8
BcaC01g05230 Brassica carinata HOM05D007394 ORTHO05D009996 7.8e-18 93.6 89 56.2
Sp4g25600 Schrenkiella parvula HOM05D007394 ORTHO05D009996 7.8e-18 93.6 87 50.6
AL1G53780 Arabidopsis lyrata HOM05D007394 ORTHO05D009996 1.3e-17 92.8 90 54.4
AT1G47540 Arabidopsis thaliana HOM05D007394 ORTHO05D009996 1.3e-17 92.8 90 54.4
Thhalv10001746m.g Eutrema salsugineum HOM05D007394 ORTHO05D009996 2.3e-17 92.0 87 50.6
BcaB02g08934 Brassica carinata HOM05D007394 ORTHO05D009996 3.0e-17 91.7 88 48.9
CARHR138620 Cardamine hirsuta HOM05D007394 ORTHO05D009996 3.0e-17 91.7 92 48.9
AT2G43510 Arabidopsis thaliana HOM05D007394 ORTHO05D009996 8.6e-17 90.1 88 50.0
CARHR138630 Cardamine hirsuta HOM05D007394 ORTHO05D009996 1.1e-16 89.7 91 52.7
BcaC02g12378 Brassica carinata HOM05D007394 ORTHO05D009996 1.5e-16 89.4 88 51.1
Sp3g24100 Schrenkiella parvula HOM05D007394 ORTHO05D009996 1.5e-16 89.4 93 52.7
A05p03830 Brassica napus HOM05D007394 ORTHO05D009996 2.5e-16 88.6 87 55.2
AL2G24960 Arabidopsis lyrata HOM05D007394 ORTHO05D009996 3.3e-16 88.2 87 49.4
BcaC02g12384 Brassica carinata HOM05D007394 ORTHO05D009996 3.3e-16 88.2 88 48.9
A05p03820 Brassica napus HOM05D007394 ORTHO05D009996 3.3e-16 88.2 88 46.6
C04p04540 Brassica napus HOM05D007394 ORTHO05D009996 3.3e-16 88.2 88 48.9
BolC4t22087H Brassica oleracea HOM05D007394 ORTHO05D009996 3.3e-16 88.2 88 48.9
A04p32800 Brassica napus HOM05D007394 ORTHO05D009996 4.3e-16 87.8 90 50.0
BraA04t18742Z Brassica rapa HOM05D007394 ORTHO05D009996 4.3e-16 87.8 90 50.0
C04p70500 Brassica napus HOM05D007394 ORTHO05D009996 5.6e-16 87.4 88 52.3
CARHR138610 Cardamine hirsuta HOM05D007394 ORTHO05D009996 5.6e-16 87.4 88 51.1
THA.LOC104803915 Tarenaya hassleriana HOM05D007394 ORTHO05D009996 5.6e-16 87.4 86 50.0
BcaB01g03378 Brassica carinata HOM05D007394 ORTHO05D009996 7.3e-16 87.0 90 50.0
BcaC02g12382 Brassica carinata HOM05D007394 ORTHO05D009996 7.3e-16 87.0 89 53.9
BcaC02g12386 Brassica carinata HOM05D007394 ORTHO05D009996 7.3e-16 87.0 88 45.5
A05p03840 Brassica napus HOM05D007394 ORTHO05D009996 7.3e-16 87.0 90 50.0
C04p04520 Brassica napus HOM05D007394 ORTHO05D009996 7.3e-16 87.0 88 45.5
C04p04550 Brassica napus HOM05D007394 ORTHO05D009996 7.3e-16 87.0 89 53.9
Carub.0004s2597 Capsella rubella HOM05D007394 ORTHO05D009996 9.5e-16 86.7 86 48.8
C04p04590 Brassica napus HOM05D007394 ORTHO05D009996 1.2e-15 86.3 89 48.3
BraA05t19373Z Brassica rapa HOM05D007394 ORTHO05D009996 1.2e-15 86.3 89 48.3
THA.LOC104803922 Tarenaya hassleriana HOM05D007394 ORTHO05D009996 1.6e-15 85.9 87 50.6
BolC4t22090H Brassica oleracea HOM05D007394 ORTHO05D009996 2.1e-15 85.5 89 48.3
Aa31LG1G25280 Aethionema arabicum HOM05D007459 ORTHO05D009234 2.8e-15 85.1 85 51.8
BraA05t19371Z Brassica rapa HOM05D007394 ORTHO05D009996 3.6e-15 84.7 90 48.9
Carub.0004s2602 Capsella rubella HOM05D007394 ORTHO05D009996 4.7e-15 84.3 87 54.0
THA.LOC104803941 Tarenaya hassleriana HOM05D007394 ORTHO05D009996 4.7e-15 84.3 87 48.3
Aa31LG1G25260 Aethionema arabicum HOM05D007394 ORTHO05D009996 6.2e-15 84.0 70 58.6
AL4G42300 Arabidopsis lyrata HOM05D007394 ORTHO05D009996 6.2e-15 84.0 88 47.7
Carub.0002s0551 Capsella rubella HOM05D007394 ORTHO05D009996 6.2e-15 84.0 90 46.7
THA.LOC109116252 Tarenaya hassleriana HOM05D007394 ORTHO05D009996 6.2e-15 84.0 87 49.4
Carub.0004s2599 Capsella rubella HOM05D007394 ORTHO05D009996 8.1e-15 83.6 87 48.3
CARHR138640 Cardamine hirsuta HOM05D007394 ORTHO05D009996 8.1e-15 83.6 95 44.2
BcaB02g08928 Brassica carinata HOM05D007394 ORTHO05D009996 1.1e-14 83.2 90 47.8
BcaB06g29320 Brassica carinata HOM05D007394 ORTHO05D009996 1.4e-14 82.8 87 51.7
THA.LOC104803932 Tarenaya hassleriana HOM05D007394 ORTHO05D009996 2.4e-14 82.0 86 47.7
A04p32810 Brassica napus HOM05D007394 ORTHO05D009996 3.1e-14 81.6 86 51.2
BraA04t18743Z Brassica rapa HOM05D007394 ORTHO05D009996 3.1e-14 81.6 86 51.2
BolC4t28552H Brassica oleracea HOM05D007394 ORTHO05D009996 5.2e-14 80.9 86 52.3
BcaB02g10434 Brassica carinata HOM05D007394 ORTHO05D009996 1.2e-13 79.7 86 48.8
C04p70530 Brassica napus HOM05D007394 ORTHO05D009996 1.2e-13 79.7 86 50.0
AL8G26520 Arabidopsis lyrata HOM05D007394 ORTHO05D009996 3.4e-13 78.2 91 44.0
BcaB06g29322 Brassica carinata HOM05D007394 ORTHO05D009996 5.8e-13 77.4 66 56.1
AT2G43535 Arabidopsis thaliana HOM05D007394 ORTHO05D009996 7.6e-13 77.0 69 52.2
BcaC02g07171 Brassica carinata HOM05D007394 ORTHO05D009996 7.6e-13 77.0 91 48.4
BcaC02g12381 Brassica carinata HOM05D007394 ORTHO05D009996 7.6e-13 77.0 91 47.3
THA.LOC104798701 Tarenaya hassleriana HOM05D007394 ORTHO05D009996 1.3e-12 76.3 88 48.9
AL4G42350 Arabidopsis lyrata HOM05D007394 ORTHO05D015383 1.7e-12 75.9 87 48.3
BcaB06g29321 Brassica carinata HOM05D007394 ORTHO05D009996 1.7e-12 75.9 66 54.5
THA.LOC104805814 Tarenaya hassleriana HOM05D007394 ORTHO05D009996 4.9e-12 74.3 88 44.3
BcaB02g08930 Brassica carinata HOM05D007394 ORTHO05D009996 8.4e-12 73.6 89 46.1
CARHR138680 Cardamine hirsuta HOM05D007394 ORTHO05D015383 8.4e-12 73.6 87 47.1
Sp4g02290 Schrenkiella parvula HOM05D007394 ORTHO05D009234 1.1e-11 73.2 92 45.7
AT2G43550 Arabidopsis thaliana HOM05D007394 ORTHO05D015383 1.4e-11 72.8 88 46.6
BolC3t15251H Brassica oleracea HOM05D007394 ORTHO05D009996 1.9e-11 72.4 71 57.7
BcaC02g07168 Brassica carinata HOM05D007459 ORTHO05D009234 5.4e-11 70.9 69 52.2
BcaC02g07172 Brassica carinata HOM05D007394 ORTHO05D009996 1.6e-10 69.3 65 50.8
Carub.0004s2603 Capsella rubella HOM05D007394 ORTHO05D015383 1.6e-10 69.3 87 44.8
Thhalv10001701m.g Eutrema salsugineum HOM05D007394 ORTHO05D032247 2.1e-10 68.9 85 43.5
BcaC02g07167 Brassica carinata HOM05D007394 ORTHO05D032247 3.5e-10 68.2 85 44.7
Sp4g25660 Schrenkiella parvula HOM05D007394 ORTHO05D015383 3.5e-10 68.2 87 43.7
BcaB06g29325 Brassica carinata HOM05D007394 ORTHO05D032247 6.0e-10 67.4 85 44.7
Thhalv10001696m.g Eutrema salsugineum HOM05D007394 ORTHO05D015383 7.8e-10 67.0 90 42.2
A04p32770 Brassica napus HOM05D007394 ORTHO05D033140 1.0e-09 66.6 89 46.1
C04p70540 Brassica napus HOM05D007394 ORTHO05D015383 1.0e-09 66.6 88 44.3
BraA04t18740Z Brassica rapa HOM05D007394 ORTHO05D033140 1.0e-09 66.6 89 46.1
BcaB06g29326 Brassica carinata HOM05D007394 ORTHO05D015383 1.7e-09 65.9 88 44.3
BcaC02g07166 Brassica carinata HOM05D007394 ORTHO05D015383 2.3e-09 65.5 88 44.3
A04p32830 Brassica napus HOM05D007394 ORTHO05D015383 2.3e-09 65.5 88 44.3
BolC4t28555H Brassica oleracea HOM05D007394 ORTHO05D015383 2.3e-09 65.5 88 44.3
BraA04t18745Z Brassica rapa HOM05D007394 ORTHO05D015383 2.3e-09 65.5 88 44.3
BcaB06g29323 Brassica carinata HOM05D007394 ORTHO05D009996 5.1e-09 64.3 70 45.7
BolC4t28551H Brassica oleracea HOM05D007394 ORTHO05D033140 8.7e-09 63.5 88 42.0
Aa31LG1G24860 Aethionema arabicum HOM05D007394 ORTHO05D009996 1.5e-08 62.8 64 46.9
C04p70470 Brassica napus HOM05D007394 ORTHO05D009234 1.2e-07 59.7 94 41.5
A04p32760 Brassica napus HOM05D007394 ORTHO05D009234 6.2e-07 57.4 94 40.4


User provided reference genes

Program Settings