Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT2G43360 Arabidopsis thaliana HOM05D005615 ORTHO05D007558 2.4e-215 751.9 379 100.0
Carub.0004s2582 Capsella rubella HOM05D005615 ORTHO05D007558 4.8e-208 727.6 381 96.1
AL4G42040 Arabidopsis lyrata HOM05D005615 ORTHO05D007558 6.3e-208 727.2 379 96.0
CARHR138440 Cardamine hirsuta HOM05D005615 ORTHO05D007558 5.2e-202 707.6 379 93.9
A03p24210 Brassica napus HOM05D005615 ORTHO05D007558 1.5e-201 706.1 382 94.0
BraA03t11630Z Brassica rapa HOM05D005615 ORTHO05D007558 1.5e-201 706.1 382 94.0
Thhalv10001495m.g Eutrema salsugineum HOM05D005615 ORTHO05D007558 2.6e-201 705.3 381 93.7
A05p03730 Brassica napus HOM05D005615 ORTHO05D007558 7.4e-201 703.7 376 94.9
BraA05t19360Z Brassica rapa HOM05D005615 ORTHO05D007558 1.3e-200 703.0 376 94.7
Sp4g25460 Schrenkiella parvula HOM05D005615 ORTHO05D007558 2.2e-200 702.2 379 92.9
BcaB01g03390 Brassica carinata HOM05D005615 ORTHO05D007558 2.8e-200 701.8 381 93.2
C04p04420 Brassica napus HOM05D005615 ORTHO05D007558 3.7e-200 701.4 376 94.4
BcaC02g12407 Brassica carinata HOM05D005615 ORTHO05D007558 6.3e-200 700.7 376 94.4
BolC4t22075H Brassica oleracea HOM05D005615 ORTHO05D007558 3.1e-199 698.4 376 92.8
Aa31LG1G25060 Aethionema arabicum HOM05D005615 ORTHO05D007558 1.3e-197 693.0 379 91.0
THA.LOC104803617 Tarenaya hassleriana HOM05D005615 ORTHO05D007558 7.7e-190 667.2 381 87.4
Actinidia34618 Actinidia chinensis HOM05D005615 ORTHO05D007558 1.2e-182 643.3 382 83.8
Potri.007G126400 Populus trichocarpa HOM05D005615 ORTHO05D007558 1.3e-181 639.8 382 82.2
Atru.chr3.1563 Acer truncatum HOM05D005615 ORTHO05D007558 2.9e-181 638.6 380 83.7
Atru.chr3.1585 Acer truncatum HOM05D005615 ORTHO05D007558 2.9e-181 638.6 380 83.7
Sabra07G0102500 Salix brachista HOM05D005615 ORTHO05D007558 2.9e-181 638.6 382 81.9
QL10p047743 Quercus lobata HOM05D005615 ORTHO05D007558 1.9e-180 636.0 380 83.7
GSVIVG01010734001 Vitis vinifera HOM05D005615 ORTHO05D007558 2.5e-180 635.6 374 84.8
Rhsim09G0030100 Rhododendron simsii HOM05D005615 ORTHO05D007558 4.2e-180 634.8 380 83.2
Potri.017G033300 Populus trichocarpa HOM05D005615 ORTHO05D007558 7.2e-180 634.0 380 81.3
ECA238G2991 Erigeron canadensis HOM05D005615 ORTHO05D007558 9.5e-180 633.6 354 87.9
MD04G1037300 Malus domestica HOM05D005615 ORTHO05D007558 1.2e-179 633.3 382 82.7
Manes.04G040500 Manihot esculenta HOM05D005615 ORTHO05D007558 1.2e-179 633.3 382 82.7
Phvul.011G023300 Phaseolus vulgaris HOM05D005615 ORTHO05D007558 4.7e-179 631.3 378 81.7
PGR083G0205 Punica granatum HOM05D005615 ORTHO05D007558 4.7e-179 631.3 382 81.4
Lj3g0021315 Lotus japonicus HOM05D005615 ORTHO05D007558 6.1e-179 630.9 378 82.0
Dinv44241 Davidia involucrata HOM05D005615 ORTHO05D007558 8.0e-179 630.6 383 82.5
Lsat_1_v5_gn_2_52041 Lactuca sativa HOM05D005615 ORTHO05D007558 1.0e-178 630.2 368 84.5
Thecc.05G003200 Theobroma cacao HOM05D005615 ORTHO05D007558 1.0e-178 630.2 362 85.4
Oeu018049.1 Olea europaea HOM05D005615 ORTHO05D007558 1.4e-178 629.8 382 82.2
CiPaw.02G056100 Carya illinoinensis HOM05D005615 ORTHO05D007558 3.0e-178 628.6 375 81.6
HanXRQChr14g0434901 Helianthus annuus HOM05D005615 ORTHO05D007558 3.0e-178 628.6 375 83.7
Ciclev10020553m.g Citrus clementina HOM05D005615 ORTHO05D007558 5.2e-178 627.9 386 82.1
Duzib093G1513 Durio zibethinus HOM05D005615 ORTHO05D007558 6.8e-178 627.5 362 84.8
Aqoxy2G04109 Aquilegia oxysepala HOM05D005615 ORTHO05D007558 8.8e-178 627.1 371 83.0
Sabra17G0020900 Salix brachista HOM05D005615 ORTHO05D007558 8.8e-178 627.1 380 80.3
arahy.Tifrunner.gnm1.ann1.2A1XYJ Arachis hypogaea HOM05D005615 ORTHO05D007558 1.2e-177 626.7 380 81.8
Migut.N03069 Erythranthe guttata HOM05D005615 ORTHO05D007558 1.5e-177 626.3 371 83.3
Hund03143 Selenicereus undatus HOM05D005615 ORTHO05D007558 1.5e-177 626.3 376 82.4
Glyma.11G094200 Glycine max HOM05D005615 ORTHO05D007558 2.0e-177 625.9 378 81.7
Os08g0540100 Oryza sativa ssp. japonica HOM05D005615 ORTHO05D007558 2.0e-177 625.9 379 81.8
PSO675G8272 Papaver somniferum HOM05D005615 ORTHO05D007558 2.0e-177 625.9 379 81.3
VMungo1127G1033 Vigna mungo HOM05D005615 ORTHO05D007558 2.0e-177 625.9 378 81.0
Lalb_Chr01g0001081 Lupinus albus HOM05D005615 ORTHO05D007558 2.6e-177 625.5 378 80.7
Sed0015751 Sechium edule HOM05D005615 ORTHO05D007558 2.6e-177 625.5 382 80.9
ClCG08G004320 Citrullus lanatus HOM05D005615 ORTHO05D007558 3.4e-177 625.2 385 81.3
Eucgr.A00054 Eucalyptus grandis HOM05D005615 ORTHO05D007558 3.4e-177 625.2 393 79.6
Glyma.12G020600 Glycine max HOM05D005615 ORTHO05D007558 3.4e-177 625.2 377 81.4
Eucgr.A00256 Eucalyptus grandis HOM05D005615 ORTHO05D007558 5.7e-177 624.4 394 79.9
CsaV3_6G003770 Cucumis sativus L. HOM05D005615 ORTHO05D007558 1.7e-176 622.9 382 80.6
Dinv22646 Davidia involucrata HOM05D005615 ORTHO05D007558 1.7e-176 622.9 380 82.4
CANSAT78G0163 Cannabis sativa HOM05D005615 ORTHO05D007558 6.3e-176 620.9 383 82.0
PSO017G2630 Papaver somniferum HOM05D005615 ORTHO05D007558 6.3e-176 620.9 380 80.8
Cfa015769 Carpinus fangiana HOM05D005615 ORTHO05D007558 8.3e-176 620.5 363 83.5
BcaC01g05236 Brassica carinata HOM05D005615 ORTHO05D007558 1.1e-175 620.2 385 84.2
Nitab4.5_0010690g0020 Nicotiana tabacum HOM05D005615 ORTHO05D007558 1.4e-175 619.8 359 85.0
TAR362G0587 Trochodendron aralioides HOM05D005615 ORTHO05D007558 1.4e-175 619.8 380 81.3
unitig_736.g22473 Utricularia gibba HOM05D005615 ORTHO05D007558 1.4e-175 619.8 378 81.2
Nitab4.5_0002368g0110 Nicotiana tabacum HOM05D005615 ORTHO05D007558 3.1e-175 618.6 352 85.5
RcHm_v2.0_Chr4g0408131 Rosa chinensis HOM05D005615 ORTHO05D007558 7.0e-175 617.5 382 79.8
Nn7g37651 Nelumbo nucifera HOM05D005615 ORTHO05D007558 1.2e-174 616.7 376 81.1
Solyc06g073470.3 Solanum lycopersicum HOM05D005615 ORTHO05D007558 1.2e-174 616.7 378 82.3
Sopen06g029830 Solanum pennellii HOM05D005615 ORTHO05D007558 1.2e-174 616.7 378 82.3
Sc13g0007050 Simmondsia chinensis HOM05D005615 ORTHO05D007558 1.6e-174 616.3 379 80.7
EL10Ac3g05574 Beta vulgaris HOM05D005615 ORTHO05D007558 2.0e-174 615.9 378 80.7
Zm00001eb037230 Zea mays HOM05D005615 ORTHO05D007558 3.5e-174 615.1 381 80.3
Cc03_g13240 Coffea canephora HOM05D005615 ORTHO05D007558 5.9e-174 614.4 368 82.3
Lalb_Chr03g0024511 Lupinus albus HOM05D005615 ORTHO05D007558 5.9e-174 614.4 378 79.6
PGSC0003DMG400026904 Solanum tuberosum HOM05D005615 ORTHO05D007558 7.8e-174 614.0 378 82.0
Haze_00733 Corylus avellana HOM05D005615 ORTHO05D007558 1.0e-173 613.6 386 79.5
SGA_v2.0_scaffold283G46961 Striga asiatica HOM05D005615 ORTHO05D007558 1.0e-173 613.6 366 82.8
FAN17G1451 Fragaria x ananassa HOM05D005615 ORTHO05D007558 2.3e-173 612.5 391 78.8
Medtr4g076870 Medicago truncatula HOM05D005615 ORTHO05D007558 2.9e-173 612.1 378 78.6
Psat7g172600 Pisum sativum HOM05D005615 ORTHO05D007558 3.8e-173 611.7 378 78.8
TWI36G1239 Tripterygium wilfordii HOM05D005615 ORTHO05D007558 5.0e-173 611.3 384 79.2
MSTRG.22029 Avicennia marina HOM05D005615 ORTHO05D007558 6.6e-173 610.9 359 84.7
Gohir.D01G221300 Gossypium hirsutum HOM05D005615 ORTHO05D007558 6.6e-173 610.9 380 79.7
Gorai.002G267900 Gossypium raimondii HOM05D005615 ORTHO05D007558 6.6e-173 610.9 380 79.7
Ca_26061_v3 Cicer arietinum L. HOM05D005615 ORTHO05D007558 1.1e-172 610.1 382 79.1
BolC3t15243H Brassica oleracea HOM05D005615 ORTHO05D007558 9.5e-172 607.1 377 83.3
TPR.G13757 Trifolium pratense HOM05D005615 ORTHO05D007558 1.2e-171 606.7 383 78.1
AUR62016250 Chenopodium quinoa HOM05D005615 ORTHO05D007558 1.6e-171 606.3 369 81.3
AUR62034151 Chenopodium quinoa HOM05D005615 ORTHO05D007558 2.8e-171 605.5 377 79.8
MELO3C011628.2 Cucumis melo HOM05D005615 ORTHO05D007558 3.6e-171 605.1 413 74.6
Gohir.A01G231200 Gossypium hirsutum HOM05D005615 ORTHO05D007558 1.4e-170 603.2 350 84.3
DCAR_029917 Daucus carota HOM05D005615 ORTHO05D007558 4.0e-170 601.7 341 84.8
ATR0743G064 Amborella trichopoda HOM05D005615 ORTHO05D007558 3.4e-169 598.6 392 77.3
arahy.Tifrunner.gnm1.ann1.VQKS2I Arachis hypogaea HOM05D005615 ORTHO05D007558 4.4e-169 598.2 380 79.2
CDE07G0588 Ceratophyllum demersum HOM05D005615 ORTHO05D007558 3.7e-168 595.1 378 77.8
Mapoly0041s0099 Marchantia polymorpha HOM05D005615 ORTHO05D007558 7.0e-167 590.9 371 79.5
SEGI_32939 Sequoiadendron giganteum HOM05D005615 ORTHO05D007558 1.6e-166 589.7 337 84.3
Pp3c1_16250 Physcomitrium patens HOM05D005615 ORTHO05D007558 4.7e-163 578.2 355 78.6
Pp3c11_17440 Physcomitrium patens HOM05D005615 ORTHO05D007558 1.1e-162 577.0 370 76.8
SMO358G0150 Selaginella moellendorffii HOM05D005615 ORTHO05D007558 7.5e-161 570.9 344 79.7
Ciclev10024495m.g Citrus clementina HOM05D005615 ORTHO05D007558 1.4e-159 566.6 386 75.6
SGA_v2.0_scaffold12G06187 Striga asiatica HOM05D005615 ORTHO05D007558 3.5e-158 562.0 390 73.8
MBI11_g35028_MAGBIO Magnolia biondii HOM05D005615 ORTHO05D007558 1.0e-157 560.5 378 76.5
Lj6A60G37 Lonicera japonica HOM05D005615 ORTHO05D007558 1.1e-156 557.0 313 86.9
AagrBONN_evm.TU.Sc2ySwM_362.1417 Anthoceros agrestis HOM05D003321 ORTHO05D005161 2.3e-149 532.7 328 76.8
AagrBONN_evm.TU.Sc2ySwM_344.4725 Anthoceros agrestis HOM05D005615 ORTHO05D007558 2.6e-145 519.2 353 69.1
Ciclev10024062m.g Citrus clementina HOM05D005615 ORTHO05D007558 6.4e-136 488.0 351 71.2
Cpa.g.sc71.17 Carica papaya HOM05D005615 ORTHO05D007558 1.4e-130 470.3 279 80.3
Prupe.1G186700 Prunus persica HOM05D005615 ORTHO05D007558 1.1e-127 460.7 264 85.6
FvH4_4g11460 Fragaria vesca HOM05D005615 ORTHO05D007558 3.2e-127 459.1 286 78.0
CAN.G65.188 Capsicum annuum HOM05D005615 ORTHO05D007558 1.5e-124 450.3 259 84.9
HPP92_002777 Vanilla planifolia HOM05D005615 ORTHO05D007558 9.6e-124 447.6 265 80.4
HPP92_028241 Vanilla planifolia HOM05D005615 ORTHO05D001525 4.8e-115 418.7 316 68.7
Cre06.g261150 Chlamydomonas reinhardtii HOM05D005615 ORTHO05D007558 2.4e-106 389.8 390 53.6
MCO13G117 Micromonas commoda HOM05D005615 ORTHO05D007558 2.4e-106 389.8 320 59.7
COL.COLO4_14419 Corchorus olitorius HOM05D005615 ORTHO05D007558 1.0e-104 384.4 215 88.4
Peaxi162Scf00375g00079 Petunia axillaris HOM05D005615 ORTHO05D007558 4.8e-99 365.5 217 83.4
FAN07G1681 Fragaria x ananassa HOM05D005615 ORTHO05D007558 1.8e-98 363.6 200 84.0
Zm00001eb198320 Zea mays HOM05D005615 ORTHO05D007558 4.1e-98 362.5 200 88.5
Haze_27367 Corylus avellana HOM05D005615 ORTHO05D007558 2.2e-80 303.5 298 52.0
vmacro00603 Vaccinium macrocarpon HOM05D005615 ORTHO05D007558 7.7e-73 278.5 234 61.1
AL3G36550 Arabidopsis lyrata HOM05D005615 ORTHO05D007558 2.4e-58 230.3 121 93.4
AL4G42060 Arabidopsis lyrata HOM05D005615 ORTHO05D007558 2.7e-57 226.9 203 63.5
CBR_g54828 Chara braunii HOM05D005615 ORTHO05D007558 2.0e-52 210.7 135 69.6
Actinidia27060 Actinidia chinensis HOM05D005615 ORTHO05D007558 2.2e-43 180.6 97 84.5
CBR_g54834 Chara braunii HOM05D005615 ORTHO05D007558 1.3e-40 171.4 104 76.9
Cpa.g.sc71.16 Carica papaya HOM05D005615 ORTHO05D007558 3.4e-36 156.8 99 82.8
CBR_g54836 Chara braunii HOM05D005615 ORTHO05D000002 2.1e-33 147.5 92 77.2
Psat3g051440 Pisum sativum HOM05D005615 ORTHO05D031631 4.4e-28 129.8 92 73.9
HPP92_002776 Vanilla planifolia HOM05D005615 ORTHO05D007558 6.4e-27 125.9 85 77.6
CDE04G1318 Ceratophyllum demersum HOM05D005615 ORTHO05D007558 5.1e-24 116.3 76 75.0
Cpa.g.c45785 Carica papaya HOM05D005615 ORTHO05D007558 2.5e-23 114.0 60 85.0
Eucgr.A00259 Eucalyptus grandis HOM05D005615 ORTHO05D007558 4.9e-19 99.8 74 68.9
Zm00001eb285620 Zea mays HOM05D001443 ORTHO05D001352 1.1e-18 98.6 126 50.0
SalBow8G4084 Salvia bowleyana HOM05D005615 ORTHO05D007558 4.2e-18 96.7 68 73.5


User provided reference genes

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