Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT2G42955 Arabidopsis thaliana HOM05D005941 ORTHO05D007879 1.1e-121 439.9 214 100.0
AL4G37620 Arabidopsis lyrata HOM05D005941 ORTHO05D007879 3.0e-29 132.9 197 42.1
AL4G36610 Arabidopsis lyrata HOM05D005941 ORTHO05D007879 8.9e-26 121.3 200 39.5
CARHR134120 Cardamine hirsuta HOM05D005941 ORTHO05D007879 2.6e-25 119.8 196 40.3
BcaC06g35151 Brassica carinata HOM05D005941 ORTHO05D007879 4.9e-24 115.5 207 37.2
BolC7t42445H Brassica oleracea HOM05D005941 ORTHO05D007879 4.9e-24 115.5 207 37.2
BcaC06g35147 Brassica carinata HOM05D005941 ORTHO05D007879 6.4e-24 115.2 205 37.1
BolC7t42451H Brassica oleracea HOM05D005941 ORTHO05D007879 6.4e-24 115.2 205 37.1
BcaB03g14064 Brassica carinata HOM05D005941 ORTHO05D007879 8.3e-24 114.8 207 37.2
Carub.0005s2945 Capsella rubella HOM05D005941 ORTHO05D007879 9.2e-23 111.3 216 37.0
A07p12860 Brassica napus HOM05D005941 ORTHO05D007879 1.6e-22 110.5 206 35.9
BolC4t26593H Brassica oleracea HOM05D005941 ORTHO05D007879 1.6e-22 110.5 195 37.9
BraA07t29061Z Brassica rapa HOM05D005941 ORTHO05D007879 2.1e-22 110.2 206 35.9
BolC7t42414H Brassica oleracea HOM05D005941 ORTHO05D007879 7.8e-22 108.2 207 37.2
BcaB03g14065 Brassica carinata HOM05D005941 ORTHO05D007879 1.3e-21 107.5 207 35.7
C03p08500 Brassica napus HOM05D005941 ORTHO05D007879 1.7e-21 107.1 208 33.7
BolC3t13355H Brassica oleracea HOM05D005941 ORTHO05D007879 1.7e-21 107.1 208 33.7
BraA06t26643Z Brassica rapa HOM05D005941 ORTHO05D007879 1.7e-21 107.1 206 36.9
A06p37200 Brassica napus HOM05D005941 ORTHO05D007879 2.3e-21 106.7 204 38.2
AL4G41930 Arabidopsis lyrata HOM05D005941 ORTHO05D007879 6.6e-21 105.1 197 37.6
AT2G30615 Arabidopsis thaliana HOM05D005941 ORTHO05D007879 8.6e-21 104.8 191 35.6
A03p07450 Brassica napus HOM05D005941 ORTHO05D007879 1.9e-20 103.6 208 32.7
CARHR138330 Cardamine hirsuta HOM05D005941 ORTHO05D007879 1.9e-20 103.6 197 38.6
C04p04330 Brassica napus HOM05D005941 ORTHO05D007879 4.3e-20 102.4 157 40.8
BolC4t22069H Brassica oleracea HOM05D005941 ORTHO05D007879 4.3e-20 102.4 157 40.8
Carub.0004s2574 Capsella rubella HOM05D005941 ORTHO05D007879 9.5e-20 101.3 200 38.0
C03p08630 Brassica napus HOM05D005941 ORTHO05D007879 2.1e-19 100.1 206 32.5
BolC3t13365H Brassica oleracea HOM05D005941 ORTHO05D007879 2.1e-19 100.1 206 32.5
BraA05t19357Z Brassica rapa HOM05D005941 ORTHO05D007879 2.1e-19 100.1 157 40.1
CARHR134100 Cardamine hirsuta HOM05D005941 ORTHO05D007879 2.8e-19 99.8 159 40.3
AT2G43260 Arabidopsis thaliana HOM05D005941 ORTHO05D007879 3.6e-19 99.4 197 36.5
Thhalv10029368m.g Eutrema salsugineum HOM05D005941 ORTHO05D007879 4.7e-19 99.0 123 46.3
AT2G30385 Arabidopsis thaliana HOM05D005941 ORTHO05D007879 1.8e-18 97.1 168 39.9
BcaC02g08826 Brassica carinata HOM05D005941 ORTHO05D007879 2.3e-18 96.7 157 40.8
BraA03t10074Z Brassica rapa HOM05D005941 ORTHO05D007879 5.2e-18 95.5 187 33.7
BcaB02g10128 Brassica carinata HOM05D005941 ORTHO05D007879 6.8e-18 95.1 206 31.1
A03p50720 Brassica napus HOM05D005941 ORTHO05D007879 6.8e-18 95.1 150 36.0
A05p03700 Brassica napus HOM05D005941 ORTHO05D007879 8.9e-18 94.7 157 37.6
BcaNung06467 Brassica carinata HOM05D005941 ORTHO05D007879 1.5e-17 94.0 152 38.2
C07p19310 Brassica napus HOM05D005941 ORTHO05D007879 2.0e-17 93.6 125 42.4
BcaC06g33593 Brassica carinata HOM05D005941 ORTHO05D007879 2.6e-17 93.2 150 35.3
BolC7t45422H Brassica oleracea HOM05D005941 ORTHO05D007879 2.6e-17 93.2 150 35.3
CARHR130490 Cardamine hirsuta HOM05D005941 ORTHO05D007879 5.8e-17 92.0 158 37.3
Carub.0007s2358 Capsella rubella HOM05D005941 ORTHO05D007879 1.7e-16 90.5 199 35.7
CARHR130510 Cardamine hirsuta HOM05D005941 ORTHO05D007879 1.7e-16 90.5 144 38.2
CARHR134960 Cardamine hirsuta HOM05D005941 ORTHO05D007879 2.2e-16 90.1 151 35.8
BcaB06g28637 Brassica carinata HOM05D005941 ORTHO05D007879 8.4e-16 88.2 207 33.8
BolC4t27710H Brassica oleracea HOM05D005941 ORTHO05D007879 8.4e-16 88.2 207 33.8
BraA03t14163Z Brassica rapa HOM05D005941 ORTHO05D007879 2.4e-15 86.7 138 34.8
C04p04390 Brassica napus HOM05D005941 ORTHO05D007879 3.2e-15 86.3 158 38.0
BolC4t22072H Brassica oleracea HOM05D005941 ORTHO05D007879 3.2e-15 86.3 158 38.0
Thhalv10027244m.g Eutrema salsugineum HOM05D005941 ORTHO05D007879 7.1e-15 85.1 147 34.7
AT4G17780 Arabidopsis thaliana HOM05D005941 ORTHO05D007879 1.6e-14 84.0 147 35.4
BcaC01g05484 Brassica carinata HOM05D005941 ORTHO05D007879 1.6e-14 84.0 196 30.6
AT2G43445 Arabidopsis thaliana HOM05D005941 ORTHO05D007879 2.1e-14 83.6 210 33.3
AT2G43440 Arabidopsis thaliana HOM05D005941 ORTHO05D007879 3.5e-14 82.8 203 30.5
AL4G34310 Arabidopsis lyrata HOM05D005941 ORTHO05D007879 6.0e-14 82.0 213 30.5
AL4G37630 Arabidopsis lyrata HOM05D005941 ORTHO05D023652 7.8e-14 81.6 123 40.7
BcaNung04033 Brassica carinata HOM05D005941 ORTHO05D007879 7.8e-14 81.6 147 34.7
BolC4t28542H Brassica oleracea HOM05D005941 ORTHO05D007879 1.3e-13 80.9 142 36.6
Thhalv10001524m.g Eutrema salsugineum HOM05D005941 ORTHO05D007879 1.3e-13 80.9 152 34.9
BolC3t15077H Brassica oleracea HOM05D005941 ORTHO05D007879 1.7e-13 80.5 171 30.4
BcaB01g03544 Brassica carinata HOM05D005941 ORTHO05D007879 3.0e-13 79.7 180 31.1
BcaB03g14061 Brassica carinata HOM05D005941 ORTHO05D007879 3.9e-13 79.3 171 32.2
C03p26250 Brassica napus HOM05D004167 ORTHO05D005012 5.1e-13 79.0 205 28.8
C04p62360 Brassica napus HOM05D005941 ORTHO05D007879 5.1e-13 79.0 158 37.3
BolC3t15010H Brassica oleracea HOM05D004167 ORTHO05D005012 5.1e-13 79.0 205 28.8
BcaC01g05402 Brassica carinata HOM05D005941 ORTHO05D007879 1.5e-12 77.4 178 29.8
BcaB06g29313 Brassica carinata HOM05D005941 ORTHO05D007879 1.9e-12 77.0 154 33.1
C03p26950 Brassica napus HOM05D005941 ORTHO05D007879 3.3e-12 76.3 178 29.8
C05p07170 Brassica napus HOM05D005941 ORTHO05D007879 1.6e-11 73.9 153 34.0
C03p26940 Brassica napus HOM05D005941 ORTHO05D007879 2.1e-11 73.6 158 30.4
BcaC02g12406 Brassica carinata HOM05D005941 ORTHO05D007879 4.7e-11 72.4 144 32.6
BcaC01g05404 Brassica carinata HOM05D005941 ORTHO05D007879 8.1e-11 71.6 154 30.5
Thhalv10016716m.g Eutrema salsugineum HOM05D005941 ORTHO05D007879 5.2e-10 68.9 191 30.9
BcaNung06618 Brassica carinata HOM05D005941 ORTHO05D007879 8.9e-10 68.2 155 34.8
Thhalv10016886m.g Eutrema salsugineum HOM05D005941 ORTHO05D007879 2.0e-09 67.0 115 35.7
BolC5t29472H Brassica oleracea HOM05D005941 ORTHO05D007879 5.8e-09 65.5 178 28.7
CARHR138480 Cardamine hirsuta HOM05D005941 ORTHO05D007879 7.6e-09 65.1 151 31.8
C04p04430 Brassica napus HOM05D005941 ORTHO05D007879 2.2e-08 63.5 73 46.6
BolC4t22076H Brassica oleracea HOM05D005941 ORTHO05D007879 2.2e-08 63.5 73 46.6
Carub.0004s1440 Capsella rubella HOM05D005941 ORTHO05D007879 4.9e-08 62.4 149 30.9
BcaC06g35173 Brassica carinata HOM05D005941 ORTHO05D007879 1.4e-07 60.8 129 31.8
Thhalv10005447m.g Eutrema salsugineum HOM05D005941 ORTHO05D007879 1.9e-07 60.5 136 30.9
BcaB01g03386 Brassica carinata HOM05D005941 ORTHO05D007879 3.2e-07 59.7 142 31.7


User provided reference genes

Program Settings