Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT2G41997 Arabidopsis thaliana HOM05D009157 ORTHO05D031338 8.6e-47 189.9 90 100.0
AL872U10020 Arabidopsis lyrata HOM05D009157 ORTHO05D031338 2.8e-29 131.7 85 71.8
AL4G38970 Arabidopsis lyrata HOM05D009157 ORTHO05D031338 4.7e-29 131.0 85 70.6
CARHR136110 Cardamine hirsuta HOM05D009157 ORTHO05D011114 3.3e-14 81.6 81 56.8
AT2G40995 Arabidopsis thaliana HOM05D009157 ORTHO05D011114 4.7e-13 77.8 83 47.0
Thhalv10016013m.g Eutrema salsugineum HOM05D009157 ORTHO05D011114 2.4e-12 75.5 86 51.2
AL872U10010 Arabidopsis lyrata HOM05D009157 ORTHO05D011114 3.1e-12 75.1 84 48.8
Carub.0005s0711 Capsella rubella HOM05D009157 ORTHO05D011114 5.3e-12 74.3 83 49.4
BraA06t24784Z Brassica rapa HOM05D009157 ORTHO05D011114 2.0e-11 72.4 83 45.8
C05p19330 Brassica napus HOM05D009157 ORTHO05D011114 5.8e-11 70.9 81 45.7
A06p16760 Brassica napus HOM05D009157 ORTHO05D011114 2.2e-10 68.9 83 43.4
BolC5t30635H Brassica oleracea HOM05D009157 ORTHO05D011114 2.2e-10 68.9 80 47.5
BraA06t24782Z Brassica rapa HOM05D009157 ORTHO05D011114 4.9e-10 67.8 80 45.0
A06p16740 Brassica napus HOM05D009157 ORTHO05D011114 1.1e-09 66.6 79 46.8
Thhalv10015663m.g Eutrema salsugineum HOM05D009157 ORTHO05D011114 1.1e-09 66.6 81 44.4
Carub.0004s2332 Capsella rubella HOM05D009157 ORTHO05D011114 1.9e-09 65.9 82 47.6
Carub.0003s2867 Capsella rubella HOM05D009157 ORTHO05D011114 2.4e-09 65.5 86 41.9
BraA06t24778Z Brassica rapa HOM05D009157 ORTHO05D011114 3.5e-08 61.6 83 41.0
Carub.0007s3316 Capsella rubella HOM05D009997 ORTHO05D013470 1.3e-07 59.7 80 40.0
BcaB03g14524 Brassica carinata HOM05D009997 ORTHO05D013470 2.3e-07 58.9 79 32.9
BcaC07g41482 Brassica carinata HOM05D009997 ORTHO05D013470 1.1e-06 56.6 82 37.8
C08p44800 Brassica napus HOM05D009997 ORTHO05D013470 1.1e-06 56.6 82 37.8
BolC8t52025H Brassica oleracea HOM05D009997 ORTHO05D013470 1.1e-06 56.6 82 37.8
AL1G27870 Arabidopsis lyrata HOM05D009997 ORTHO05D013470 2.5e-06 55.5 79 35.4
Sp1g14050 Schrenkiella parvula HOM05D009997 ORTHO05D013470 7.3e-06 53.9 82 36.6
AL1G48580 Arabidopsis lyrata HOM05D009157 ORTHO05D011114 9.6e-06 53.5 81 37.0
AT1G15757 Arabidopsis thaliana HOM05D009997 ORTHO05D013470 9.6e-06 53.5 79 35.4


User provided reference genes

Program Settings