Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT2G41200 Arabidopsis thaliana HOM05D007488 ORTHO05D009461 5.4e-84 314.3 162 100.0
AL4G39170 Arabidopsis lyrata HOM05D007488 ORTHO05D009461 4.3e-81 304.7 162 95.7
CARHR136300 Cardamine hirsuta HOM05D007488 ORTHO05D009461 8.4e-77 290.4 162 91.4
Thhalv10017345m.g Eutrema salsugineum HOM05D007488 ORTHO05D009461 1.1e-76 290.0 162 90.7
Sp4g23500 Schrenkiella parvula HOM05D007488 ORTHO05D009461 1.1e-76 290.0 162 90.1
BcaB01g03485 Brassica carinata HOM05D007488 ORTHO05D009461 9.3e-76 287.0 162 88.3
A03p23120 Brassica napus HOM05D007488 ORTHO05D009461 6.0e-75 284.3 162 87.7
BraA03t11533Z Brassica rapa HOM05D007488 ORTHO05D009461 6.0e-75 284.3 162 87.7
BcaC01g05355 Brassica carinata HOM05D007488 ORTHO05D009461 1.7e-74 282.7 162 87.0
C03p27550 Brassica napus HOM05D007488 ORTHO05D009461 1.7e-74 282.7 162 87.0
BolC3t15128H Brassica oleracea HOM05D007488 ORTHO05D009461 1.7e-74 282.7 162 87.0
Carub.0004s2351 Capsella rubella HOM05D007488 ORTHO05D009461 8.1e-64 247.3 141 85.8
BcaC02g12760 Brassica carinata HOM05D007488 ORTHO05D009461 4.1e-55 218.4 161 72.7
THA.LOC104803261 Tarenaya hassleriana HOM05D007488 ORTHO05D009461 5.9e-54 214.5 165 68.5
Cpa.g.sc5.171 Carica papaya HOM05D007488 ORTHO05D009461 1.6e-43 179.9 165 57.0
PGR142G4416 Punica granatum HOM05D007488 ORTHO05D009461 1.4e-39 166.8 163 52.8
Manes.09G005400 Manihot esculenta HOM05D007488 ORTHO05D009461 3.4e-38 162.2 163 51.5
Ciclev10006109m.g Citrus clementina HOM05D007488 ORTHO05D009461 6.5e-37 157.9 163 49.7
Eucgr.A02247 Eucalyptus grandis HOM05D007488 ORTHO05D009461 1.1e-36 157.1 165 49.1
TWI74G0203 Tripterygium wilfordii HOM05D007488 ORTHO05D009461 1.1e-36 157.1 146 52.7
Cc06_g19180 Coffea canephora HOM05D007488 ORTHO05D009461 1.4e-36 156.8 162 50.6
Lsat_1_v5_gn_5_157940 Lactuca sativa HOM05D007488 ORTHO05D009461 2.5e-36 156.0 151 52.3
Rhsim03G0039700 Rhododendron simsii HOM05D007488 ORTHO05D009461 4.7e-35 151.8 163 50.9
HanXRQChr03g0061531 Helianthus annuus HOM05D007488 ORTHO05D009461 7.9e-35 151.0 162 46.9
Haze_15889 Corylus avellana HOM05D007488 ORTHO05D009461 1.8e-34 149.8 166 48.8
Sc18g0003830 Simmondsia chinensis HOM05D007488 ORTHO05D009461 5.1e-34 148.3 145 50.3
Aa31LG3G800 Aethionema arabicum HOM05D007488 ORTHO05D009461 6.7e-34 147.9 83 88.0
Prupe.7G038600 Prunus persica HOM05D007488 ORTHO05D009461 8.8e-34 147.5 186 43.5
ECA248G2641 Erigeron canadensis HOM05D007488 ORTHO05D009461 1.1e-33 147.1 151 49.7
Actinidia01825 Actinidia chinensis HOM05D007488 ORTHO05D009461 1.5e-33 146.7 163 47.9
MD14G1087900 Malus domestica HOM05D007488 ORTHO05D009461 1.5e-33 146.7 163 48.5
Migut.K00133 Erythranthe guttata HOM05D007488 ORTHO05D009461 2.0e-33 146.4 162 47.5
SalBow1G5076 Salvia bowleyana HOM05D007488 ORTHO05D009461 3.3e-33 145.6 162 46.3
SalBow1G6194 Salvia bowleyana HOM05D007488 ORTHO05D009461 3.3e-33 145.6 162 46.3
Psat3g078680 Pisum sativum HOM05D007488 ORTHO05D009461 7.4e-33 144.4 163 49.1
Cfa003623 Carpinus fangiana HOM05D007488 ORTHO05D009461 9.7e-33 144.1 163 47.2
Nn4g25823 Nelumbo nucifera HOM05D007488 ORTHO05D009461 1.7e-32 143.3 151 51.7
DCAR_016880 Daucus carota HOM05D007488 ORTHO05D009461 2.2e-32 142.9 164 47.6
Atru.chr1.1442 Acer truncatum HOM05D007488 ORTHO05D009461 4.8e-32 141.7 164 46.3
C04p02520 Brassica napus HOM05D007488 ORTHO05D009461 4.8e-32 141.7 96 76.0
QL07p010346 Quercus lobata HOM05D007488 ORTHO05D009461 1.1e-31 140.6 161 44.7
MSTRG.19810 Avicennia marina HOM05D007488 ORTHO05D009461 1.4e-31 140.2 162 45.1
Medtr7g089940 Medicago truncatula HOM05D007488 ORTHO05D009461 1.8e-31 139.8 163 46.6
Thecc.05G135000 Theobroma cacao HOM05D007488 ORTHO05D009461 1.8e-31 139.8 162 50.0
Ca_08393_v3 Cicer arietinum L. HOM05D007488 ORTHO05D009461 2.4e-31 139.4 163 47.2
CiPaw.09G047600 Carya illinoinensis HOM05D007488 ORTHO05D009461 4.1e-31 138.7 163 44.8
Dinv09710 Davidia involucrata HOM05D007488 ORTHO05D009461 5.3e-31 138.3 163 46.0
AUR62030320 Chenopodium quinoa HOM05D007488 ORTHO05D009461 1.2e-30 137.1 165 46.1
Duzib106G1788 Durio zibethinus HOM05D007488 ORTHO05D009461 2.6e-30 136.0 162 48.8
TPR.G30624 Trifolium pratense HOM05D007488 ORTHO05D009461 3.5e-30 135.6 163 46.6
CANSAT64G0776 Cannabis sativa HOM05D007488 ORTHO05D009461 5.9e-30 134.8 168 45.2
Potri.006G038600 Populus trichocarpa HOM05D007488 ORTHO05D009461 5.9e-30 134.8 118 57.6
BolC4t21895H Brassica oleracea HOM05D007488 ORTHO05D009461 1.0e-29 134.0 82 80.5
Peaxi162Scf00076g00524 Petunia axillaris HOM05D007488 ORTHO05D009461 1.3e-29 133.7 151 44.4
EL10Ac3g07236 Beta vulgaris HOM05D007488 ORTHO05D009461 1.7e-29 133.3 163 48.5
AUR62018346 Chenopodium quinoa HOM05D007488 ORTHO05D009461 5.0e-29 131.7 165 44.8
Hund19096 Selenicereus undatus HOM05D007488 ORTHO05D009461 1.1e-28 130.6 165 43.6
Lalb_Chr22g0357421 Lupinus albus HOM05D007488 ORTHO05D009461 7.2e-28 127.9 164 48.2
Gohir.A11G307200 Gossypium hirsutum HOM05D007488 ORTHO05D009461 9.4e-28 127.5 152 46.7
CAN.G317.6 Capsicum annuum HOM05D007488 ORTHO05D009461 2.1e-27 126.3 162 41.4
Gohir.D11G322700 Gossypium hirsutum HOM05D007488 ORTHO05D009461 2.7e-27 125.9 152 46.1
Nitab4.5_0001937g0020 Nicotiana tabacum HOM05D007488 ORTHO05D009461 6.1e-27 124.8 163 42.3
Nitab4.5_0000424g0040 Nicotiana tabacum HOM05D007488 ORTHO05D009461 8.0e-27 124.4 126 48.4
SGA_v2.0_scaffold94G28540 Striga asiatica HOM05D007488 ORTHO05D009461 8.0e-27 124.4 152 44.1
Lj1g0022068 Lotus japonicus HOM05D007488 ORTHO05D009461 1.0e-26 124.0 165 42.4
Sopen03g012080 Solanum pennellii HOM05D007488 ORTHO05D009461 1.0e-26 124.0 162 40.1
Gorai.007G352800 Gossypium raimondii HOM05D007488 ORTHO05D009461 2.3e-26 122.9 152 44.7
TAR369G0408 Trochodendron aralioides HOM05D007488 ORTHO05D009461 3.0e-26 122.5 175 43.4
Ah.04g150940 Amaranthus hybridus HOM05D007488 ORTHO05D009461 4.0e-26 122.1 107 58.9
PSO339G1058 Papaver somniferum HOM05D007488 ORTHO05D009461 5.2e-26 121.7 163 39.9
Nitab4.5_0006279g0050 Nicotiana tabacum HOM05D007488 ORTHO05D009461 8.8e-26 120.9 148 43.2
arahy.Tifrunner.gnm1.ann1.8RZU3Q Arachis hypogaea HOM05D007488 ORTHO05D009461 1.1e-25 120.6 169 42.0
Nitab4.5_0000812g0120 Nicotiana tabacum HOM05D007488 ORTHO05D009461 1.5e-25 120.2 166 41.0
arahy.Tifrunner.gnm1.ann1.Z4B7ZU Arachis hypogaea HOM05D007488 ORTHO05D009461 7.5e-25 117.9 169 41.4
VMungo1383G0792 Vigna mungo HOM05D007488 ORTHO05D009461 1.7e-24 116.7 166 42.8
Aqoxy2G00394 Aquilegia oxysepala HOM05D007488 ORTHO05D009461 2.2e-24 116.3 191 38.2
Glyma.19G130600 Glycine max HOM05D007488 ORTHO05D009461 2.4e-23 112.8 166 40.4
Phvul.001G123700 Phaseolus vulgaris HOM05D007488 ORTHO05D009461 2.4e-23 112.8 168 39.9
Oeu063781.2 Olea europaea HOM05D004518 ORTHO05D005434 1.2e-22 110.5 115 44.3
A05p02110 Brassica napus HOM05D007488 ORTHO05D009461 1.6e-22 110.2 94 63.8
BraA05t19207Z Brassica rapa HOM05D007488 ORTHO05D009461 1.6e-22 110.2 94 63.8
RcHm_v2.0_Chr2g0164041 Rosa chinensis HOM05D007488 ORTHO05D009461 1.6e-22 110.2 160 40.0
FAN05G4359 Fragaria x ananassa HOM05D007488 ORTHO05D009461 2.0e-22 109.8 190 40.5
FvH4_6g45840 Fragaria vesca HOM05D007488 ORTHO05D009461 1.7e-21 106.7 177 38.4
Glyma.03G128000 Glycine max HOM05D007488 ORTHO05D009461 2.9e-21 105.9 166 41.0
FAN02G3897 Fragaria x ananassa HOM05D007488 ORTHO05D009461 2.5e-20 102.8 178 39.3
Lj1P1093T64 Lonicera japonica HOM05D007488 ORTHO05D009461 2.1e-19 99.8 83 51.8
Sopen10g029120 Solanum pennellii HOM05D000484 ORTHO05D000346 4.7e-19 98.6 132 41.7
GSVIVG01033626001 Vitis vinifera HOM05D007488 ORTHO05D009461 1.7e-16 90.1 119 37.8
Peaxi162Scf00701g00057 Petunia axillaris HOM05D007488 ORTHO05D009461 6.3e-16 88.2 87 49.4
FAN14G1565 Fragaria x ananassa HOM05D007488 ORTHO05D009461 1.1e-15 87.4 79 58.2
CDE09G0800 Ceratophyllum demersum HOM05D007488 ORTHO05D009461 9.1e-15 84.3 169 32.5
PSO384G4473 Papaver somniferum HOM05D007488 ORTHO05D009461 1.6e-14 83.6 116 38.8
MBI18_g37945_MAGBIO Magnolia biondii HOM05D007488 ORTHO05D009461 2.1e-11 73.2 145 35.2
Solyc03g058440.1 Solanum lycopersicum HOM05D007488 ORTHO05D009461 3.0e-10 69.3 67 52.2
FAN09G2471 Fragaria x ananassa HOM05D007488 ORTHO05D009461 1.5e-09 67.0 146 32.2
ATR0057G037 Amborella trichopoda HOM05D007488 ORTHO05D009461 5.9e-06 55.1 173 30.1


User provided reference genes

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