Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT2G41120 Arabidopsis thaliana HOM05D007528 ORTHO05D008503 5.2e-145 517.7 262 100.0
AL4G39090 Arabidopsis lyrata HOM05D007528 ORTHO05D008503 3.8e-135 485.0 262 94.7
Carub.0004s2343 Capsella rubella HOM05D007528 ORTHO05D008503 2.7e-125 452.2 262 87.8
Thhalv10017145m.g Eutrema salsugineum HOM05D007528 ORTHO05D008503 1.7e-119 433.0 252 87.7
Sp4g23430 Schrenkiella parvula HOM05D007528 ORTHO05D008503 2.9e-119 432.2 262 84.7
BraA04t18594Z Brassica rapa HOM05D007528 ORTHO05D008503 2.7e-109 399.1 260 80.4
A04p31360 Brassica napus HOM05D007528 ORTHO05D008503 1.5e-107 393.3 260 79.6
C04p68770 Brassica napus HOM05D007528 ORTHO05D008503 5.6e-107 391.3 264 78.8
BolC4t28382H Brassica oleracea HOM05D007528 ORTHO05D008503 9.6e-107 390.6 261 78.9
CARHR136210 Cardamine hirsuta HOM05D007528 ORTHO05D008503 1.7e-103 379.8 264 78.8
BcaNung05626 Brassica carinata HOM05D007528 ORTHO05D008503 7.4e-99 364.4 266 75.9
THA.LOC104803254 Tarenaya hassleriana HOM05D007528 ORTHO05D008503 7.4e-99 364.4 261 74.3
Aa31LG3G960 Aethionema arabicum HOM05D007528 ORTHO05D008503 1.4e-97 360.1 263 70.3
TAR623G0014 Trochodendron aralioides HOM05D007528 ORTHO05D008503 6.8e-68 261.5 194 64.4
Manes.09G073900 Manihot esculenta HOM05D007528 ORTHO05D008503 9.7e-67 257.7 262 55.0
Dinv14550 Davidia involucrata HOM05D007528 ORTHO05D008503 3.7e-66 255.8 192 64.6
Potri.006G025200 Populus trichocarpa HOM05D007528 ORTHO05D008503 4.8e-66 255.4 263 54.4
Cpa.g.sc33.188 Carica papaya HOM05D007528 ORTHO05D008503 2.0e-64 250.0 188 66.0
Lalb_Chr22g0358311 Lupinus albus HOM05D007528 ORTHO05D008503 2.7e-64 249.6 203 63.1
SalBow6G5858 Salvia bowleyana HOM05D007528 ORTHO05D008503 5.9e-64 248.4 223 56.1
QL11p009983 Quercus lobata HOM05D007528 ORTHO05D008503 1.0e-63 247.7 259 54.1
MSTRG.19743 Avicennia marina HOM05D007528 ORTHO05D008503 1.3e-63 247.3 263 50.2
FAN28G2175 Fragaria x ananassa HOM05D007528 ORTHO05D008503 2.9e-63 246.1 238 56.7
MBI13_g02396_MAGBIO Magnolia biondii HOM05D007528 ORTHO05D008503 2.9e-63 246.1 191 63.9
Oeu032951.1 Olea europaea HOM05D007528 ORTHO05D008503 2.9e-63 246.1 195 60.5
arahy.Tifrunner.gnm1.ann1.ARK2IX Arachis hypogaea HOM05D007528 ORTHO05D008503 5.0e-63 245.4 192 63.0
Sabra06G0018500 Salix brachista HOM05D007528 ORTHO05D008503 5.0e-63 245.4 260 50.0
FvH4_1g29750 Fragaria vesca HOM05D007528 ORTHO05D008503 6.5e-63 245.0 236 56.4
RcHm_v2.0_Chr3g0495771 Rosa chinensis HOM05D007528 ORTHO05D008503 6.5e-63 245.0 243 55.6
SalBow6G5282 Salvia bowleyana HOM05D007528 ORTHO05D008503 1.1e-62 244.2 249 52.2
PGR042G1749 Punica granatum HOM05D007528 ORTHO05D008503 1.5e-62 243.8 250 55.6
CANSAT21G0864 Cannabis sativa HOM05D007528 ORTHO05D008503 1.9e-62 243.4 259 54.8
GSVIVG01025860001 Vitis vinifera HOM05D007528 ORTHO05D008503 1.9e-62 243.4 191 60.7
FAN26G0883 Fragaria x ananassa HOM05D007528 ORTHO05D008503 2.5e-62 243.0 236 56.4
Ciclev10012580m.g Citrus clementina HOM05D007528 ORTHO05D008503 3.2e-62 242.7 250 54.4
Atru.chr8.936 Acer truncatum HOM05D007528 ORTHO05D008503 5.5e-62 241.9 250 54.4
Cc06_g21080 Coffea canephora HOM05D007528 ORTHO05D008503 5.5e-62 241.9 247 51.0
PGSC0003DMG400019757 Solanum tuberosum HOM05D007528 ORTHO05D008503 5.5e-62 241.9 210 55.7
Glyma.19G123400 Glycine max HOM05D007528 ORTHO05D008503 7.2e-62 241.5 179 65.4
Gorai.002G231000 Gossypium raimondii HOM05D007528 ORTHO05D008503 1.2e-61 240.7 256 51.6
Nitab4.5_0000382g0060 Nicotiana tabacum HOM05D007528 ORTHO05D008503 1.2e-61 240.7 253 51.8
Peaxi162Scf00183g00712 Petunia axillaris HOM05D007528 ORTHO05D008503 1.2e-61 240.7 242 53.7
MD12G1013500 Malus domestica HOM05D007528 ORTHO05D008503 1.6e-61 240.4 258 55.8
Aqoxy2G00067 Aquilegia oxysepala HOM05D007528 ORTHO05D008503 2.1e-61 240.0 260 51.2
Medtr7g088210 Medicago truncatula HOM05D007528 ORTHO05D008503 2.1e-61 240.0 181 64.6
PSO729G0248 Papaver somniferum HOM05D007528 ORTHO05D008503 2.1e-61 240.0 193 60.6
Eucgr.A02169 Eucalyptus grandis HOM05D007528 ORTHO05D008503 4.7e-61 238.8 244 53.7
vmacro12911 Vaccinium macrocarpon HOM05D007528 ORTHO05D008503 4.7e-61 238.8 220 56.8
COL.COLO4_08087 Corchorus olitorius HOM05D007528 ORTHO05D008503 6.1e-61 238.4 212 57.5
Solyc03g044630.2 Solanum lycopersicum HOM05D007528 ORTHO05D008503 6.1e-61 238.4 209 56.0
Gohir.D01G187600 Gossypium hirsutum HOM05D007528 ORTHO05D008503 8.0e-61 238.0 254 51.2
arahy.Tifrunner.gnm1.ann1.ZMQ31P Arachis hypogaea HOM05D007528 ORTHO05D008503 1.0e-60 237.7 181 63.0
Duzib093G0275 Durio zibethinus HOM05D007528 ORTHO05D008503 1.0e-60 237.7 246 54.1
Lj1g0006388 Lotus japonicus HOM05D007528 ORTHO05D008503 1.4e-60 237.3 242 52.1
CsaV3_3G039560 Cucumis sativus L. HOM05D007528 ORTHO05D008503 1.8e-60 236.9 247 53.0
Phvul.001G109000 Phaseolus vulgaris HOM05D007528 ORTHO05D008503 5.2e-60 235.3 251 52.2
TWI63G0885 Tripterygium wilfordii HOM05D007528 ORTHO05D008503 5.2e-60 235.3 255 49.4
EL10Ac5g11614 Beta vulgaris HOM05D007528 ORTHO05D008503 8.8e-60 234.6 206 55.8
Psat3g082960 Pisum sativum HOM05D007528 ORTHO05D008503 8.8e-60 234.6 232 54.7
CSS0027135 Camellia sinensis var. sinensis HOM05D007528 ORTHO05D008503 1.5e-59 233.8 250 52.8
Ca_08340_v3 Cicer arietinum L. HOM05D007528 ORTHO05D008503 1.5e-59 233.8 193 61.1
Gohir.A01G197400 Gossypium hirsutum HOM05D007528 ORTHO05D008503 1.5e-59 233.8 254 50.8
Nn7g37298 Nelumbo nucifera HOM05D007528 ORTHO05D008503 1.5e-59 233.8 191 60.2
TPR.G23704 Trifolium pratense HOM05D007528 ORTHO05D008503 1.5e-59 233.8 238 53.4
CDE04G0261 Ceratophyllum demersum HOM05D007528 ORTHO05D008503 2.0e-59 233.4 202 58.4
Haze_09241 Corylus avellana HOM05D007528 ORTHO05D006305 2.6e-59 233.0 210 56.7
DCAR_013508 Daucus carota HOM05D007528 ORTHO05D008503 2.6e-59 233.0 268 50.0
Thecc.05G128400 Theobroma cacao HOM05D007528 ORTHO05D008503 3.4e-59 232.6 232 53.9
ClCG10G016790 Citrullus lanatus HOM05D007528 ORTHO05D008503 1.3e-58 230.7 248 51.2
Migut.J01598 Erythranthe guttata HOM05D007528 ORTHO05D008503 1.7e-58 230.3 244 50.8
BcaC02g12850 Brassica carinata HOM05D007528 ORTHO05D008503 3.1e-57 226.1 168 74.4
Lj2A414T28 Lonicera japonica HOM05D007528 ORTHO05D008503 4.1e-57 225.7 249 49.8
ECA236G1579 Erigeron canadensis HOM05D007528 ORTHO05D008503 5.4e-57 225.3 188 59.0
ATR0307G122 Amborella trichopoda HOM05D007528 ORTHO05D008503 1.6e-56 223.8 194 56.2
Lsat_1_v5_gn_8_83941 Lactuca sativa HOM05D007528 ORTHO05D008503 1.6e-56 223.8 176 60.2
Sed0015046 Sechium edule HOM05D007528 ORTHO05D008503 1.6e-56 223.8 234 52.1
Prupe.7G017900 Prunus persica HOM05D007528 ORTHO05D008503 1.3e-55 220.7 143 71.3
HanXRQChr04g0125621 Helianthus annuus HOM05D007528 ORTHO05D008503 1.1e-54 217.6 245 50.6
Os11g0130200 Oryza sativa ssp. japonica HOM05D007528 ORTHO05D008503 5.2e-52 208.8 199 53.3
Zm00001eb195960 Zea mays HOM05D007528 ORTHO05D008503 5.7e-51 205.3 194 53.1
SEGI_20851 Sequoiadendron giganteum HOM05D007528 ORTHO05D008503 8.3e-50 201.4 239 49.0
Pp3c21_6860 Physcomitrium patens HOM05D007528 ORTHO05D008503 1.1e-46 191.0 193 50.3
AagrBONN_evm.TU.Sc2ySwM_344.4238 Anthoceros agrestis HOM05D007528 ORTHO05D008503 1.9e-46 190.3 195 50.3
Mapoly0168s0009 Marchantia polymorpha HOM05D007528 ORTHO05D008503 1.6e-45 187.2 220 47.7
CiPaw.13G169300 Carya illinoinensis HOM05D007528 ORTHO05D008503 3.6e-45 186.0 162 59.9
SMO266G0100 Selaginella moellendorffii HOM05D007528 ORTHO05D008503 4.0e-44 182.6 189 50.8
Rhsim10G0151800 Rhododendron simsii HOM05D007528 ORTHO05D008503 8.9e-44 181.4 137 64.2
CBR_g37627 Chara braunii HOM05D007528 ORTHO05D008503 1.4e-41 174.1 187 49.2
FAN19G0638 Fragaria x ananassa HOM05D007528 ORTHO05D008503 5.2e-36 155.6 129 62.0
CAN.G1129.33 Capsicum annuum HOM05D007528 ORTHO05D008503 5.1e-31 139.0 124 55.6
Sopen03g008910 Solanum pennellii HOM05D007528 ORTHO05D008503 3.6e-29 132.9 124 52.4
unitig_21.g20663 Utricularia gibba HOM05D007528 ORTHO05D008503 5.1e-23 112.5 203 37.9
Glyma.03G119100 Glycine max HOM05D007528 ORTHO05D008503 8.6e-23 111.7 123 48.8
Glyma.03G119000 Glycine max HOM05D007528 ORTHO05D008503 1.6e-16 90.9 131 45.0
VMungo1383G2363 Vigna mungo HOM05D007528 ORTHO05D008503 8.7e-15 85.1 51 74.5
SEGI_18622 Sequoiadendron giganteum HOM05D007528 ORTHO05D008503 3.4e-11 73.2 114 42.1
FAN23G1305 Fragaria x ananassa HOM05D007528 ORTHO05D029410 1.4e-09 67.8 81 48.1
Hma1.2p1_1327F.1_g275910 Hydrangea macrophylla HOM05D007528 ORTHO05D008503 1.5e-06 57.8 73 47.9


User provided reference genes

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