Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT2G38890 Arabidopsis thaliana HOM05D013918 ORTHO05D013953 5.0e-158 561.2 320 100.0
AL4G36200 Arabidopsis lyrata HOM05D013918 ORTHO05D013953 1.3e-124 450.3 327 79.5
Thhalv10017720m.g Eutrema salsugineum HOM05D013918 ORTHO05D013953 1.1e-93 347.4 310 71.0
Sp4g21280 Schrenkiella parvula HOM05D013918 ORTHO05D013953 1.6e-87 327.0 314 70.4
CARHR133620 Cardamine hirsuta HOM05D013918 ORTHO05D013953 1.4e-86 323.9 297 74.1
BolC3t14959H Brassica oleracea HOM05D013918 ORTHO05D013953 2.2e-76 290.0 336 57.4
C03p25710 Brassica napus HOM05D000297 ORTHO05D013953 3.1e-75 286.2 329 57.1
BraA03t11406Z Brassica rapa HOM05D000297 ORTHO05D013953 5.3e-75 285.4 332 57.8
A03p21720 Brassica napus HOM05D013918 ORTHO05D013953 9.1e-75 284.6 329 57.4
BcaB01g03624 Brassica carinata HOM05D000297 ORTHO05D013953 6.5e-73 278.5 320 59.4
BcaC01g05505 Brassica carinata HOM05D013918 ORTHO05D013953 5.3e-67 258.8 332 54.8
Carub.0004s2092 Capsella rubella HOM05D013918 ORTHO05D013953 2.8e-60 236.5 215 77.2
Aa31LG5G20760 Aethionema arabicum HOM05D013918 ORTHO05D013953 4.1e-51 206.1 319 53.9
Thecc.10G067600 Theobroma cacao HOM05D003265 ORTHO05D003819 4.9e-12 76.3 221 31.2
Gorai.013G024900 Gossypium raimondii HOM05D003265 ORTHO05D003819 6.4e-12 75.9 233 29.6
Duzib106G1563 Durio zibethinus HOM05D003265 ORTHO05D003819 4.2e-11 73.2 211 28.4
Gohir.A13G021500 Gossypium hirsutum HOM05D003265 ORTHO05D003819 4.2e-11 73.2 232 29.3
THA.LOC104824221 Tarenaya hassleriana HOM05D003265 ORTHO05D013953 4.2e-11 73.2 469 28.1
Gohir.D13G022100 Gossypium hirsutum HOM05D003265 ORTHO05D003819 7.1e-11 72.4 233 29.6
COL.COLO4_23753 Corchorus olitorius HOM05D003265 ORTHO05D003819 2.7e-10 70.5 245 28.6
Potri.008G044500 Populus trichocarpa HOM05D003265 ORTHO05D003819 3.9e-09 66.6 238 27.7
TWI63G0250 Tripterygium wilfordii HOM05D003265 ORTHO05D003819 1.5e-08 64.7 190 30.5
FAN06G2521 Fragaria x ananassa HOM05D003265 ORTHO05D003819 7.3e-08 62.4 244 28.7
CiPaw.01G276700 Carya illinoinensis HOM05D003265 ORTHO05D003819 1.6e-07 61.2 143 32.9
FAN03G0618 Fragaria x ananassa HOM05D003265 ORTHO05D003819 1.6e-07 61.2 243 28.0
QL08p056892 Quercus lobata HOM05D003265 ORTHO05D003819 2.1e-07 60.8 169 29.6
Sabra08G0030800 Salix brachista HOM05D003265 ORTHO05D003819 2.1e-07 60.8 234 26.1
FvH4_7g20180 Fragaria vesca HOM05D003265 ORTHO05D003819 2.8e-07 60.5 243 28.4
Ciclev10033690m.g Citrus clementina HOM05D003265 ORTHO05D003819 3.1e-06 57.0 228 35.1
Thecc.05G053900 Theobroma cacao HOM05D003265 ORTHO05D003819 3.1e-06 57.0 161 30.4
EL10Ac7g17351 Beta vulgaris HOM05D003265 ORTHO05D003819 4.0e-06 56.6 228 24.1
Ah.15g092100 Amaranthus hybridus HOM05D003265 ORTHO05D003819 5.3e-06 56.2 201 30.3
Eucgr.A01175 Eucalyptus grandis HOM05D003265 ORTHO05D003819 5.3e-06 56.2 180 28.3
ClCG09G020420 Citrullus lanatus HOM05D003265 ORTHO05D003819 6.9e-06 55.8 149 30.2
COL.COLO4_27082 Corchorus olitorius HOM05D003265 ORTHO05D003819 6.9e-06 55.8 145 31.0
GSVIVG01025624001 Vitis vinifera HOM05D000855 ORTHO05D002321 6.9e-06 55.8 144 30.6


User provided reference genes

Program Settings