Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT2G38790 Arabidopsis thaliana HOM05D008140 ORTHO05D009650 8.9e-100 367.1 205 100.0
AL4G36090 Arabidopsis lyrata HOM05D008140 ORTHO05D009650 2.7e-88 328.9 208 87.0
Carub.0004s2081 Capsella rubella HOM05D008140 ORTHO05D009650 2.6e-75 285.8 211 76.8
CARHR133500 Cardamine hirsuta HOM05D008140 ORTHO05D009650 2.6e-67 259.2 208 67.3
Sp4g21180 Schrenkiella parvula HOM05D008140 ORTHO05D009650 2.6e-67 259.2 224 71.4
A03p21600 Brassica napus HOM05D008140 ORTHO05D009650 1.3e-66 256.9 210 69.5
BraA03t11396Z Brassica rapa HOM05D008140 ORTHO05D009650 1.3e-66 256.9 210 69.5
BolC3t14947H Brassica oleracea HOM05D008140 ORTHO05D009650 3.5e-64 248.8 203 71.9
C03p25590 Brassica napus HOM05D008140 ORTHO05D009650 3.0e-63 245.7 203 71.4
BolC4t22473H Brassica oleracea HOM05D008140 ORTHO05D009650 6.7e-63 244.6 212 71.2
BcaB02g09156 Brassica carinata HOM05D008140 ORTHO05D009650 8.7e-63 244.2 216 69.9
BcaB02g09155 Brassica carinata HOM05D008140 ORTHO05D009650 7.4e-62 241.1 214 69.6
C04p08800 Brassica napus HOM05D008140 ORTHO05D009650 7.4e-62 241.1 219 68.9
BcaC02g12023 Brassica carinata HOM05D008140 ORTHO05D009650 9.6e-62 240.7 219 68.9
A05p07380 Brassica napus HOM05D008140 ORTHO05D009650 5.3e-60 235.0 208 70.2
BraA05t19703Z Brassica rapa HOM05D008140 ORTHO05D009650 5.3e-60 235.0 208 70.2
A05p07360 Brassica napus HOM05D008140 ORTHO05D009650 2.0e-59 233.0 220 67.7
BraA05t19701Z Brassica rapa HOM05D008140 ORTHO05D009650 2.0e-59 233.0 220 67.7
AL4G20280 Arabidopsis lyrata HOM05D008140 ORTHO05D009650 4.2e-41 172.2 164 64.6
THA.LOC104803169 Tarenaya hassleriana HOM05D008140 ORTHO05D009650 8.5e-34 147.9 209 44.0
A03p21630 Brassica napus HOM05D008140 ORTHO05D009650 1.2e-30 137.5 109 72.5
BraA03t11398Z Brassica rapa HOM05D008140 ORTHO05D009650 1.2e-30 137.5 109 72.5
C03p25610 Brassica napus HOM05D008140 ORTHO05D009650 1.7e-29 133.7 109 68.8
BolC3t14949H Brassica oleracea HOM05D008140 ORTHO05D009650 1.7e-29 133.7 109 68.8
THA.LOC104803183 Tarenaya hassleriana HOM05D008140 ORTHO05D009650 7.5e-22 108.2 120 56.7
Potri.010G235400 Populus trichocarpa HOM05D008140 ORTHO05D009650 9.5e-17 91.3 165 38.2
Duzib106G0172 Durio zibethinus HOM05D008140 ORTHO05D009650 3.6e-16 89.4 152 38.2
Thecc.10G110900 Theobroma cacao HOM05D008140 ORTHO05D009650 2.3e-15 86.7 160 36.9
Sabra10G0182500 Salix brachista HOM05D008140 ORTHO05D009650 4.4e-14 82.4 177 35.0
Haze_02596 Corylus avellana HOM05D008140 ORTHO05D009650 2.2e-13 80.1 158 38.6
Cfa011233 Carpinus fangiana HOM05D008140 ORTHO05D009650 2.8e-13 79.7 192 35.9
Prupe.2G086100 Prunus persica HOM05D008140 ORTHO05D009650 2.8e-13 79.7 148 37.8
MD07G1068400 Malus domestica HOM05D008140 ORTHO05D009650 4.9e-13 79.0 146 39.0
AL4G20420 Arabidopsis lyrata HOM05D008140 ORTHO05D009650 1.1e-12 77.8 61 77.0
Cfa011234 Carpinus fangiana HOM05D008140 ORTHO05D009650 1.1e-12 77.8 163 37.4
Potri.008G025100 Populus trichocarpa HOM05D008140 ORTHO05D009650 1.1e-12 77.8 146 38.4
COL.COLO4_06812 Corchorus olitorius HOM05D008140 ORTHO05D009650 1.4e-12 77.4 157 36.9
Potri.008G025200 Populus trichocarpa HOM05D008140 ORTHO05D009650 7.0e-12 75.1 146 37.7
Ciclev10033301m.g Citrus clementina HOM05D008140 ORTHO05D009650 9.2e-12 74.7 178 36.5
FvH4_7g05940 Fragaria vesca HOM05D008140 ORTHO05D009650 1.6e-11 73.9 145 37.9
FAN06G2722 Fragaria x ananassa HOM05D008140 ORTHO05D009650 1.6e-11 73.9 145 37.9
Sabra08G0016900 Salix brachista HOM05D008140 ORTHO05D009650 1.6e-11 73.9 161 35.4
FAN03G1479 Fragaria x ananassa HOM05D008140 ORTHO05D009650 2.0e-11 73.6 145 37.2
FAN01G1993 Fragaria x ananassa HOM05D008140 ORTHO05D009650 7.8e-11 71.6 167 34.7
FAN10G4346 Fragaria x ananassa HOM05D008140 ORTHO05D009650 1.3e-10 70.9 145 37.2
RcHm_v2.0_Chr1g0333141 Rosa chinensis HOM05D008140 ORTHO05D009650 8.6e-10 68.2 166 33.1
RcHm_v2.0_Chr1g0333151 Rosa chinensis HOM05D008140 ORTHO05D009650 1.1e-09 67.8 145 35.2
Haze_02595 Corylus avellana HOM05D008140 ORTHO05D009650 2.5e-09 66.6 161 35.4
Cpa.g.sc19.24 Carica papaya HOM05D008140 ORTHO05D009650 7.3e-09 65.1 100 38.0
CiPaw.13G036800 Carya illinoinensis HOM05D008140 ORTHO05D009650 7.3e-09 65.1 156 35.3
Manes.07G090200 Manihot esculenta HOM05D008140 ORTHO05D009650 1.6e-08 63.9 107 43.0
QL04p042101 Quercus lobata HOM05D008140 ORTHO05D009650 2.1e-08 63.5 158 29.1
CiPaw.14G029100 Carya illinoinensis HOM05D008140 ORTHO05D009650 1.8e-07 60.5 176 30.1
Rhsim03G0105800 Rhododendron simsii HOM05D008140 ORTHO05D009650 2.3e-07 60.1 106 39.6
Lalb_Chr06g0170171 Lupinus albus HOM05D008140 ORTHO05D009650 3.0e-07 59.7 152 30.9
TWI38G0562 Tripterygium wilfordii HOM05D008140 ORTHO05D009650 5.2e-07 58.9 161 30.4
QL04p041480 Quercus lobata HOM05D008140 ORTHO05D009650 1.5e-06 57.4 165 32.1
QL04p041477 Quercus lobata HOM05D008140 ORTHO05D009650 4.4e-06 55.8 148 29.1


User provided reference genes

Program Settings