Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT2G38570 Arabidopsis thaliana HOM05D006410 ORTHO05D007914 1.7e-172 609.4 329 100.0
Carub.0004s2056 Capsella rubella HOM05D006410 ORTHO05D007914 1.1e-139 500.4 355 79.7
AL4G35850 Arabidopsis lyrata HOM05D006410 ORTHO05D007914 3.6e-135 485.3 352 79.8
Sp4g20910 Schrenkiella parvula HOM05D006410 ORTHO05D007914 1.9e-123 446.4 357 70.9
CARHR133250 Cardamine hirsuta HOM05D006410 ORTHO05D007914 4.4e-117 425.2 330 77.3
BcaB01g03675 Brassica carinata HOM05D006410 ORTHO05D007914 5.6e-112 408.3 353 68.3
BraA03t11374Z Brassica rapa HOM05D006410 ORTHO05D007914 2.0e-109 399.8 330 67.6
A03p21390 Brassica napus HOM05D006410 ORTHO05D007914 7.6e-109 397.9 325 68.3
BcaC01g05529 Brassica carinata HOM05D006410 ORTHO05D007914 2.9e-108 396.0 324 67.9
Thhalv10017800m.g Eutrema salsugineum HOM05D006410 ORTHO05D007914 2.9e-108 396.0 289 74.4
BolC3t14920H Brassica oleracea HOM05D006410 ORTHO05D007914 3.8e-108 395.6 324 67.6
C03p25260 Brassica napus HOM05D006410 ORTHO05D007914 2.1e-106 389.8 328 66.2
THA.LOC104806212 Tarenaya hassleriana HOM05D006410 ORTHO05D007914 1.3e-76 290.8 245 63.7
Potri.006G109500 Populus trichocarpa HOM05D006410 ORTHO05D007914 5.0e-68 262.3 251 59.8
GSVIVG01030169001 Vitis vinifera HOM05D006410 ORTHO05D007914 5.0e-68 262.3 209 66.0
Sabra06G0085200 Salix brachista HOM05D006410 ORTHO05D007914 8.5e-68 261.5 279 57.0
COL.COLO4_03931 Corchorus olitorius HOM05D006410 ORTHO05D007914 1.1e-67 261.2 280 55.0
TAR633G1493 Trochodendron aralioides HOM05D006410 ORTHO05D007914 2.7e-66 256.5 292 52.4
Ciclev10012138m.g Citrus clementina HOM05D006410 ORTHO05D007914 6.1e-66 255.4 171 76.0
Atru.chr8.91 Acer truncatum HOM05D006410 ORTHO05D007914 1.0e-65 254.6 197 67.0
Thecc.04G150000 Theobroma cacao HOM05D006410 ORTHO05D007914 1.0e-65 254.6 172 76.7
Gohir.A02G002700 Gossypium hirsutum HOM05D006410 ORTHO05D007914 1.1e-64 251.1 234 60.7
Dinv16966 Davidia involucrata HOM05D006410 ORTHO05D007914 1.5e-64 250.8 175 72.6
Gorai.005G003500 Gossypium raimondii HOM05D006410 ORTHO05D007914 1.5e-64 250.8 234 60.3
Gohir.D02G003000 Gossypium hirsutum HOM05D006410 ORTHO05D007914 2.6e-64 250.0 234 62.0
Manes.09G123200 Manihot esculenta HOM05D006410 ORTHO05D007914 3.3e-64 249.6 313 48.2
Cfa013491 Carpinus fangiana HOM05D006410 ORTHO05D007914 5.7e-64 248.8 209 66.0
Haze_22079 Corylus avellana HOM05D006410 ORTHO05D007914 5.7e-64 248.8 202 67.3
HanXRQChr15g0464751 Helianthus annuus HOM05D006410 ORTHO05D007914 7.4e-64 248.4 269 53.5
PGR004G0643 Punica granatum HOM05D006410 ORTHO05D007914 2.2e-63 246.9 216 63.4
Lsat_1_v5_gn_9_39501 Lactuca sativa HOM05D006410 ORTHO05D007914 2.8e-63 246.5 218 61.5
Solyc10g085690.2 Solanum lycopersicum HOM05D006410 ORTHO05D007914 4.8e-63 245.7 172 70.9
QL07p031892 Quercus lobata HOM05D006410 ORTHO05D007914 6.3e-63 245.4 209 65.1
CsaV3_4G027230 Cucumis sativus L. HOM05D006410 ORTHO05D007914 1.1e-62 244.6 210 64.8
ECA247G0827 Erigeron canadensis HOM05D006410 ORTHO05D007914 1.4e-62 244.2 261 53.6
VMungo1383G1039 Vigna mungo HOM05D006410 ORTHO05D007914 1.4e-62 244.2 206 65.0
Duzib212G0115 Durio zibethinus HOM05D006410 ORTHO05D007914 1.8e-62 243.8 196 68.9
Nitab4.5_0009611g0010 Nicotiana tabacum HOM05D006410 ORTHO05D007914 1.8e-62 243.8 212 62.7
vmacro20378 Vaccinium macrocarpon HOM05D006410 ORTHO05D007914 1.8e-62 243.8 227 60.8
CiPaw.10G165500 Carya illinoinensis HOM05D006410 ORTHO05D007914 2.4e-62 243.4 305 50.2
TPR.G24331 Trifolium pratense HOM05D006410 ORTHO05D007914 2.4e-62 243.4 230 60.0
Eucgr.G01626 Eucalyptus grandis HOM05D006410 ORTHO05D007914 3.1e-62 243.0 193 66.8
Sopen10g035110 Solanum pennellii HOM05D006410 ORTHO05D007914 3.1e-62 243.0 172 70.3
CAN.G1018.3 Capsicum annuum HOM05D006410 ORTHO05D007914 4.1e-62 242.7 172 70.9
Eucgr.J00376 Eucalyptus grandis HOM05D006410 ORTHO05D007914 7.0e-62 241.9 193 66.3
Medtr7g073510 Medicago truncatula HOM05D006410 ORTHO05D007914 7.0e-62 241.9 281 53.0
Prupe.6G295400 Prunus persica HOM05D006410 ORTHO05D007914 9.1e-62 241.5 262 54.6
ClCG04G006320 Citrullus lanatus HOM05D006410 ORTHO05D007914 1.2e-61 241.1 184 68.5
CDE04G0338 Ceratophyllum demersum HOM05D006410 ORTHO05D007914 1.5e-61 240.7 201 62.2
PSO384G4459 Papaver somniferum HOM05D006410 ORTHO05D007914 1.5e-61 240.7 199 62.3
Rhsim05G0231700 Rhododendron simsii HOM05D006410 ORTHO05D007914 2.0e-61 240.4 227 59.9
RcHm_v2.0_Chr3g0460291 Rosa chinensis HOM05D006410 ORTHO05D007914 2.0e-61 240.4 286 49.7
Lalb_Chr03g0043841 Lupinus albus HOM05D006410 ORTHO05D007914 2.6e-61 240.0 192 66.1
TWI77G0542 Tripterygium wilfordii HOM05D006410 ORTHO05D007914 2.6e-61 240.0 204 66.2
Eucgr.A00566 Eucalyptus grandis HOM05D006410 ORTHO05D007914 3.4e-61 239.6 229 59.8
Glyma.09G273700 Glycine max HOM05D006410 ORTHO05D007914 3.4e-61 239.6 281 51.2
Glyma.18G212900 Glycine max HOM05D006410 ORTHO05D007914 4.5e-61 239.2 228 60.5
Eucgr.G00130 Eucalyptus grandis HOM05D006410 ORTHO05D007914 5.9e-61 238.8 193 65.8
Nn2g10260 Nelumbo nucifera HOM05D006410 ORTHO05D007914 5.9e-61 238.8 249 52.6
Phvul.008G081500 Phaseolus vulgaris HOM05D006410 ORTHO05D007914 7.7e-61 238.4 208 63.9
Eucgr.H04867 Eucalyptus grandis HOM05D006410 ORTHO05D007914 1.3e-60 237.7 184 67.9
PSO339G1476 Papaver somniferum HOM05D006410 ORTHO05D007914 1.3e-60 237.7 198 60.6
Lj1g0017463 Lotus japonicus HOM05D006410 ORTHO05D007914 1.7e-60 237.3 227 59.0
MD12G1190300 Malus domestica HOM05D006410 ORTHO05D007914 5.0e-60 235.7 233 59.2
Actinidia20795 Actinidia chinensis HOM05D006410 ORTHO05D007914 1.4e-59 234.2 167 70.7
Eucgr.K01292 Eucalyptus grandis HOM05D006410 ORTHO05D007914 1.4e-59 234.2 192 65.1
Peaxi162Scf00146g01120 Petunia axillaris HOM05D006410 ORTHO05D007914 1.4e-59 234.2 172 68.6
FAN05G4204 Fragaria x ananassa HOM05D006410 ORTHO05D007914 4.2e-59 232.6 189 64.6
Hma1.2p1_0537F.1_g174300 Hydrangea macrophylla HOM05D006410 ORTHO05D007914 4.2e-59 232.6 172 66.9
Psat3g118640 Pisum sativum HOM05D006410 ORTHO05D007914 4.2e-59 232.6 271 52.0
arahy.Tifrunner.gnm1.ann1.LV5WBC Arachis hypogaea HOM05D006410 ORTHO05D007914 7.2e-59 231.9 191 65.4
FAN14G0316 Fragaria x ananassa HOM05D006410 ORTHO05D007914 7.2e-59 231.9 189 64.0
Aqoxy4G03284 Aquilegia oxysepala HOM05D006410 ORTHO05D007914 9.4e-59 231.5 183 66.1
arahy.Tifrunner.gnm1.ann1.K0FU58 Arachis hypogaea HOM05D006410 ORTHO05D007914 9.4e-59 231.5 191 64.4
FvH4_6g09660 Fragaria vesca HOM05D006410 ORTHO05D007914 9.4e-59 231.5 246 54.1
Cc06_g00300 Coffea canephora HOM05D006410 ORTHO05D007914 1.2e-58 231.1 169 69.8
FAN09G0831 Fragaria x ananassa HOM05D006410 ORTHO05D007914 1.2e-58 231.1 189 64.6
FAN02G1808 Fragaria x ananassa HOM05D006410 ORTHO05D007914 2.7e-58 229.9 189 63.0
MSTRG.5489 Avicennia marina HOM05D006410 ORTHO05D007914 6.1e-58 228.8 170 67.6
BcaB01g00971 Brassica carinata HOM05D006410 ORTHO05D007914 2.3e-57 226.9 177 74.6
SalBow5G5142 Salvia bowleyana HOM05D006410 ORTHO05D007914 6.7e-57 225.3 184 61.4
MD04G1175900 Malus domestica HOM05D006410 ORTHO05D007914 8.8e-57 224.9 192 62.0
Nitab4.5_0000381g0170 Nicotiana tabacum HOM05D006410 ORTHO05D007914 2.0e-56 223.8 236 55.1
Sc07g0005960 Simmondsia chinensis HOM05D006410 ORTHO05D007914 6.3e-55 218.8 188 63.3
ATR1127G206 Amborella trichopoda HOM05D006410 ORTHO05D007914 8.2e-55 218.4 183 59.6
EL10Ac7g17116 Beta vulgaris HOM05D006410 ORTHO05D007914 1.8e-54 217.2 223 55.6
arahy.Tifrunner.gnm1.ann1.PEH6CG Arachis hypogaea HOM05D006410 ORTHO05D007914 2.4e-54 216.9 181 63.5
AUR62029781 Chenopodium quinoa HOM05D006410 ORTHO05D007914 2.4e-54 216.9 172 64.5
arahy.Tifrunner.gnm1.ann1.A09QMR Arachis hypogaea HOM05D006410 ORTHO05D007914 1.2e-53 214.5 166 66.9
Zm00001eb395200 Zea mays HOM05D006410 ORTHO05D007914 3.5e-53 213.0 291 45.7
arahy.Tifrunner.gnm1.ann1.2Y9ZDG Arachis hypogaea HOM05D006410 ORTHO05D007914 1.7e-52 210.7 165 66.1
CANSAT21G1321 Cannabis sativa HOM05D006410 ORTHO05D007914 6.5e-52 208.8 176 64.8
HPP92_026801 Vanilla planifolia HOM05D006410 ORTHO05D007914 1.1e-51 208.0 249 48.2
HPP92_000776 Vanilla planifolia HOM05D006410 ORTHO05D007914 4.2e-51 206.1 249 47.8
Hund19754 Selenicereus undatus HOM05D006410 ORTHO05D007914 1.6e-50 204.1 167 62.9
SEGI_21416 Sequoiadendron giganteum HOM05D006410 ORTHO05D007914 1.6e-50 204.1 214 49.5
Lj3A940G60 Lonicera japonica HOM05D006410 ORTHO05D007914 3.6e-50 203.0 148 68.9
SGA_v2.0_scaffold85G26601 Striga asiatica HOM05D006410 ORTHO05D007914 1.5e-48 197.6 221 53.4
Ca_07767_v3 Cicer arietinum L. HOM05D006410 ORTHO05D007914 3.3e-48 196.4 176 64.2
Ca_07774_v3 Cicer arietinum L. HOM05D006410 ORTHO05D007914 3.8e-44 183.0 200 56.5
Cpa.g.sc86.77 Carica papaya HOM05D006410 ORTHO05D007914 9.4e-43 178.3 187 56.1
SalBow5G0627 Salvia bowleyana HOM05D006410 ORTHO05D007914 1.8e-41 174.1 134 64.9
AagrBONN_evm.TU.Sc2ySwM_344.4011 Anthoceros agrestis HOM05D006410 ORTHO05D007914 6.6e-36 155.6 165 47.9
MELO3C025226.2 Cucumis melo HOM05D006410 ORTHO05D007914 1.9e-35 154.1 132 62.9
CSS0050432 Camellia sinensis var. sinensis HOM05D006410 ORTHO05D007914 1.8e-33 147.5 136 61.0
CSS0030024 Camellia sinensis var. sinensis HOM05D006410 ORTHO05D007914 6.3e-31 139.0 99 73.7
Os03g0334100 Oryza sativa ssp. japonica HOM05D006410 ORTHO05D007914 3.5e-29 133.3 98 66.3
arahy.Tifrunner.gnm1.ann1.CPU7B3 Arachis hypogaea HOM05D006410 ORTHO05D007914 3.8e-28 129.8 102 64.7
CSS0025367 Camellia sinensis var. sinensis HOM05D006410 ORTHO05D007914 6.6e-28 129.0 127 58.3
RhsimUnG0084100 Rhododendron simsii HOM05D006410 ORTHO05D007914 1.1e-27 128.3 127 56.7
RhsimUnG0080900 Rhododendron simsii HOM05D006410 ORTHO05D007914 2.5e-27 127.1 126 56.3
Sed0027859 Sechium edule HOM05D006410 ORTHO05D007914 1.5e-24 117.9 115 59.1
MCO09G517 Micromonas commoda HOM05D006410 ORTHO05D007914 4.4e-24 116.3 172 37.8
CBR_g644 Chara braunii HOM05D006410 ORTHO05D007914 3.3e-19 100.1 174 31.6
Duzib151G0462 Durio zibethinus HOM05D006410 ORTHO05D007914 6.2e-18 95.9 61 77.0
SEGI_07330 Sequoiadendron giganteum HOM05D006410 ORTHO05D007914 1.3e-15 88.2 121 41.3
CDE04G1109 Ceratophyllum demersum HOM05D040252 ORTHO05D007914 9.5e-11 72.0 168 34.5
Cre17.g738200 Chlamydomonas reinhardtii HOM05D006410 ORTHO05D007914 9.9e-08 62.0 165 30.3
Oeu030096.1 Olea europaea HOM05D006410 ORTHO05D007914 4.9e-07 59.7 79 48.1
CSS0000421 Camellia sinensis var. sinensis HOM05D006410 ORTHO05D007914 1.1e-06 58.5 74 52.7


User provided reference genes

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