Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT2G38140 Arabidopsis thaliana HOM05D007113 ORTHO05D008859 4.9e-58 227.6 119 100.0
CARHR132730 Cardamine hirsuta HOM05D007113 ORTHO05D008859 4.9e-50 201.1 120 91.7
C04p09540 Brassica napus HOM05D007113 ORTHO05D008859 4.2e-49 198.0 120 89.2
BolC4t22560H Brassica oleracea HOM05D007113 ORTHO05D008859 4.2e-49 198.0 120 89.2
BraA05t19755Z Brassica rapa HOM05D007113 ORTHO05D008859 6.0e-48 194.1 120 86.7
A05p07890 Brassica napus HOM05D007113 ORTHO05D008859 1.5e-46 189.5 120 85.0
Aa31sc189G20 Aethionema arabicum HOM05D007113 ORTHO05D008859 3.6e-45 184.9 123 83.7
AL4G35140 Arabidopsis lyrata HOM05D007113 ORTHO05D008859 2.6e-43 178.7 119 84.0
THA.LOC104805827 Tarenaya hassleriana HOM05D007113 ORTHO05D008859 2.6e-43 178.7 123 78.0
Carub.0004s2011 Capsella rubella HOM05D007113 ORTHO05D008859 2.2e-42 175.6 119 82.4
Thhalv10017376m.g Eutrema salsugineum HOM05D007113 ORTHO05D008859 6.7e-39 164.1 123 76.4
Sp4g20460 Schrenkiella parvula HOM05D007113 ORTHO05D008859 7.4e-38 160.6 124 77.4
Gorai.002G262200 Gossypium raimondii HOM05D007113 ORTHO05D008859 4.8e-37 157.9 122 70.5
Gohir.A01G226400 Gossypium hirsutum HOM05D007113 ORTHO05D008859 1.4e-36 156.4 122 69.7
Gohir.D01G216000 Gossypium hirsutum HOM05D007113 ORTHO05D008859 4.0e-36 154.8 122 69.7
DCAR_028817 Daucus carota HOM05D007113 ORTHO05D008859 5.3e-36 154.5 121 67.8
Atru.chr8.2216 Acer truncatum HOM05D007113 ORTHO05D008859 1.5e-35 152.9 119 68.9
COL.COLO4_14561 Corchorus olitorius HOM05D007113 ORTHO05D008859 4.5e-35 151.4 124 69.4
MD12G1164000 Malus domestica HOM05D007113 ORTHO05D008859 2.9e-34 148.7 116 69.8
PGR004G1045 Punica granatum HOM05D007113 ORTHO05D008859 3.8e-34 148.3 121 67.8
Thecc.05G019300 Theobroma cacao HOM05D007113 ORTHO05D008859 8.4e-34 147.1 122 68.0
Nn8g40109 Nelumbo nucifera HOM05D007113 ORTHO05D008859 3.2e-33 145.2 120 66.7
MD04G1149600 Malus domestica HOM05D007113 ORTHO05D008859 9.3e-33 143.7 116 66.4
Duzib093G1147 Durio zibethinus HOM05D007113 ORTHO05D008859 2.7e-32 142.1 122 63.9
Eucgr.K02991 Eucalyptus grandis HOM05D007113 ORTHO05D008859 3.5e-32 141.7 128 66.4
Dinv34405 Davidia involucrata HOM05D007113 ORTHO05D008859 7.9e-32 140.6 121 65.3
FAN09G0121 Fragaria x ananassa HOM05D007113 ORTHO05D008859 1.8e-31 139.4 116 64.7
GSVIVG01033979001 Vitis vinifera HOM05D007113 ORTHO05D008859 1.8e-31 139.4 118 64.4
FAN14G1367 Fragaria x ananassa HOM05D007113 ORTHO05D008859 2.3e-31 139.0 116 63.8
Ciclev10013049m.g Citrus clementina HOM05D007113 ORTHO05D008859 3.9e-31 138.3 121 65.3
Haze_20976 Corylus avellana HOM05D007113 ORTHO05D008859 1.1e-30 136.7 115 64.3
FAN05G2893 Fragaria x ananassa HOM05D007113 ORTHO05D008859 1.1e-30 136.7 116 63.8
FvH4_6g11730 Fragaria vesca HOM05D007113 ORTHO05D008859 2.5e-30 135.6 116 62.9
CSS0048161 Camellia sinensis var. sinensis HOM05D007113 ORTHO05D008859 4.3e-30 134.8 102 72.5
CDE03G0108 Ceratophyllum demersum HOM05D007113 ORTHO05D008859 4.3e-30 134.8 118 61.9
RcHm_v2.0_Chr3g0463511 Rosa chinensis HOM05D007113 ORTHO05D008859 4.3e-30 134.8 116 64.7
Oeu028599.1 Olea europaea HOM05D007113 ORTHO05D008859 5.7e-30 134.4 125 60.8
Aqoxy4G02617 Aquilegia oxysepala HOM05D007113 ORTHO05D008859 9.6e-30 133.7 120 63.3
CDE04G2391 Ceratophyllum demersum HOM05D007113 ORTHO05D008859 2.1e-29 132.5 118 60.2
TWI74G0516 Tripterygium wilfordii HOM05D007113 ORTHO05D008859 2.1e-29 132.5 118 65.3
ECA238G3418 Erigeron canadensis HOM05D007113 ORTHO05D008859 2.8e-29 132.1 104 69.2
CANSAT35G0395 Cannabis sativa HOM05D007113 ORTHO05D008859 2.4e-28 129.0 118 61.9
PSO384G2929 Papaver somniferum HOM05D007113 ORTHO05D008859 2.4e-28 129.0 122 65.6
PSO339G1456 Papaver somniferum HOM05D007113 ORTHO05D008859 3.1e-28 128.6 122 65.6
Glyma.03G063200 Glycine max HOM05D007113 ORTHO05D008859 9.0e-28 127.1 122 61.5
TWI77G0060 Tripterygium wilfordii HOM05D007113 ORTHO05D008859 1.2e-27 126.7 116 62.1
Hma1.2p1_0362F.1_g136060 Hydrangea macrophylla HOM05D007113 ORTHO05D008859 1.5e-27 126.3 117 62.4
MELO3C003245.2 Cucumis melo HOM05D007113 ORTHO05D008859 2.0e-27 125.9 123 61.0
Lsat_1_v5_gn_9_63261 Lactuca sativa HOM05D007113 ORTHO05D008859 3.4e-27 125.2 120 60.8
ClCG04G007070 Citrullus lanatus HOM05D007113 ORTHO05D008859 5.8e-27 124.4 120 62.5
HanXRQChr14g0460151 Helianthus annuus HOM05D007113 ORTHO05D008859 5.8e-27 124.4 121 60.3
Cfa017230 Carpinus fangiana HOM05D007113 ORTHO05D008859 1.3e-26 123.2 115 60.0
Lsat_1_v5_gn_2_121221 Lactuca sativa HOM05D007113 ORTHO05D008859 1.3e-26 123.2 80 76.2
Lj3g0022517 Lotus japonicus HOM05D007113 ORTHO05D008859 1.3e-26 123.2 122 59.0
TAR623G1648 Trochodendron aralioides HOM05D007113 ORTHO05D008859 2.2e-26 122.5 102 66.7
CsaV3_4G026180 Cucumis sativus L. HOM05D007113 ORTHO05D008859 2.9e-26 122.1 100 66.0
Phvul.004G171400 Phaseolus vulgaris HOM05D007113 ORTHO05D008859 2.9e-26 122.1 122 58.2
Phvul.010G003200 Phaseolus vulgaris HOM05D007113 ORTHO05D008859 2.9e-26 122.1 122 58.2
Migut.F01372 Erythranthe guttata HOM05D007113 ORTHO05D008859 3.8e-26 121.7 122 61.5
SalBow6G1146 Salvia bowleyana HOM05D007113 ORTHO05D008859 6.5e-26 120.9 124 58.9
Sed0004762 Sechium edule HOM05D007113 ORTHO05D008859 6.5e-26 120.9 120 63.3
FAN02G3283 Fragaria x ananassa HOM05D008730 ORTHO05D008859 1.1e-25 120.2 109 60.6
arahy.Tifrunner.gnm1.ann1.J29A80 Arachis hypogaea HOM05D007113 ORTHO05D008859 1.4e-25 119.8 126 56.3
ATR0618G049 Amborella trichopoda HOM05D007113 ORTHO05D008859 1.9e-25 119.4 120 60.0
VMungo1127G1807 Vigna mungo HOM05D007113 ORTHO05D008859 3.2e-25 118.6 121 57.0
Potri.016G113700 Populus trichocarpa HOM05D007113 ORTHO05D008859 4.2e-25 118.2 116 61.2
Glyma.01G114800 Glycine max HOM05D007113 ORTHO05D008859 7.2e-25 117.5 122 58.2
Actinidia29691 Actinidia chinensis HOM05D007113 ORTHO05D008859 2.7e-24 115.5 118 58.5
FAN14G0869 Fragaria x ananassa HOM05D008730 ORTHO05D010922 2.7e-24 115.5 109 57.8
unitig_62.g23930 Utricularia gibba HOM05D000230 ORTHO05D000176 2.7e-24 115.5 122 54.1
Nitab4.5_0008493g0040 Nicotiana tabacum HOM05D007113 ORTHO05D008859 4.6e-24 114.8 117 53.8
Sopen05g031230 Solanum pennellii HOM05D007113 ORTHO05D008859 4.6e-24 114.8 120 53.3
CiPaw.10G155700 Carya illinoinensis HOM05D007113 ORTHO05D008859 7.9e-24 114.0 116 58.6
Nitab4.5_0000802g0080 Nicotiana tabacum HOM05D007113 ORTHO05D008859 7.9e-24 114.0 117 53.8
Solyc05g052710.3 Solanum lycopersicum HOM05D007113 ORTHO05D008859 1.0e-23 113.6 120 54.2
PGSC0003DMG400027129 Solanum tuberosum HOM05D007113 ORTHO05D008859 1.0e-23 113.6 120 52.5
Cc02_g06720 Coffea canephora HOM05D007113 ORTHO05D008859 5.1e-23 111.3 119 51.3
Lalb_Chr07g0193491 Lupinus albus HOM05D007113 ORTHO05D008859 1.1e-22 110.2 74 71.6
Rhsim03G0141800 Rhododendron simsii HOM05D007113 ORTHO05D008859 3.3e-22 108.6 139 51.1
Manes.08G090600 Manihot esculenta HOM05D007113 ORTHO05D008859 9.7e-22 107.1 66 75.8
Oeu025646.1 Olea europaea HOM05D007113 ORTHO05D008859 4.8e-21 104.8 74 71.6
vmacro06980 Vaccinium macrocarpon HOM05D007113 ORTHO05D008859 6.3e-21 104.4 121 56.2
Medtr4g015540 Medicago truncatula HOM05D007113 ORTHO05D008859 1.4e-20 103.2 120 52.5
HPP92_019871 Vanilla planifolia HOM05D007113 ORTHO05D008859 2.4e-20 102.4 117 49.6
Peaxi162Scf00957g00229 Petunia axillaris HOM05D011221 ORTHO05D013370 4.1e-20 101.7 108 54.6
arahy.Tifrunner.gnm1.ann1.62SCQ6 Arachis hypogaea HOM05D007113 ORTHO05D008859 5.3e-20 101.3 128 49.2
CAN.G503.7 Capsicum annuum HOM05D007113 ORTHO05D008859 5.3e-20 101.3 117 50.4
Ca_20298_v3 Cicer arietinum L. HOM05D007113 ORTHO05D008859 9.0e-20 100.5 109 55.0
Nitab4.5_0004338g0130 Nicotiana tabacum HOM05D007113 ORTHO05D008859 1.5e-19 99.8 114 51.8
SGA_v2.0_scaffold78G25464 Striga asiatica HOM05D007113 ORTHO05D008859 2.0e-19 99.4 120 50.0
Sc11g0007190 Simmondsia chinensis HOM05D007113 ORTHO05D008859 3.4e-19 98.6 113 52.2
TPR.G13351 Trifolium pratense HOM05D007113 ORTHO05D008859 1.3e-18 96.7 73 64.4
Psat7g246120 Pisum sativum HOM05D007113 ORTHO05D008859 1.7e-18 96.3 117 51.3
Lsat_1_v5_gn_9_63281 Lactuca sativa HOM05D005832 ORTHO05D007117 2.2e-18 95.9 99 56.6
Hund23901 Selenicereus undatus HOM05D007113 ORTHO05D008859 2.9e-18 95.5 106 59.4
SEGI_38672 Sequoiadendron giganteum HOM05D007113 ORTHO05D008859 3.8e-18 95.1 67 70.1
SGA_v2.0_scaffold20G09268 Striga asiatica HOM05D007113 ORTHO05D008859 3.8e-18 95.1 115 48.7
EL10Ac2g04810 Beta vulgaris HOM05D007113 ORTHO05D008859 5.0e-18 94.7 109 58.7
SEGI_10938 Sequoiadendron giganteum HOM05D007113 ORTHO05D008859 6.5e-18 94.4 100 55.0
Os05g0186000 Oryza sativa ssp. japonica HOM05D007113 ORTHO05D008859 8.5e-18 94.0 63 68.3
TWI53G1153 Tripterygium wilfordii HOM05D007113 ORTHO05D008859 8.5e-18 94.0 85 60.0
Ah.16g103370 Amaranthus hybridus HOM05D007113 ORTHO05D008859 9.4e-17 90.5 100 57.0
Haze_17209 Corylus avellana HOM05D007113 ORTHO05D008859 9.4e-17 90.5 104 52.9
Zm00001eb144250 Zea mays HOM05D007113 ORTHO05D008859 9.4e-17 90.5 118 45.8
Mapoly0005s0194 Marchantia polymorpha HOM05D007113 ORTHO05D008859 6.1e-16 87.8 105 49.5
QL08p062975 Quercus lobata HOM05D007113 ORTHO05D008859 3.0e-15 85.5 107 52.3
AagrBONN_evm.TU.Sc2ySwM_362.1890 Anthoceros agrestis HOM05D007113 ORTHO05D008859 2.0e-14 82.8 78 56.4
arahy.Tifrunner.gnm1.ann1.C0BXE8 Arachis hypogaea HOM05D007113 ORTHO05D008859 2.4e-12 75.9 94 43.6
Sabra16G0109100 Salix brachista HOM05D007113 ORTHO05D008859 2.0e-11 72.8 115 50.4
Prupe.6G274500 Prunus persica HOM05D007113 ORTHO05D008859 4.5e-11 71.6 83 51.8
arahy.Tifrunner.gnm1.ann1.CDY6H8 Arachis hypogaea HOM05D007113 ORTHO05D008859 5.9e-11 71.2 94 42.6
Pp3c15_12810 Physcomitrium patens HOM05D007113 ORTHO05D008859 1.0e-10 70.5 72 52.8
Pp3c9_12290 Physcomitrium patens HOM05D007113 ORTHO05D008859 1.0e-10 70.5 106 50.0
VMungo0331G1181 Vigna mungo HOM05D007113 ORTHO05D008859 1.4e-07 60.1 108 38.9


User provided reference genes

Program Settings