Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT2G37330 Arabidopsis thaliana HOM05D005959 ORTHO05D007263 7.9e-144 513.8 274 100.0
AL4G33710 Arabidopsis lyrata HOM05D005959 ORTHO05D007263 5.9e-139 497.7 274 96.4
Carub.0004s1924 Capsella rubella HOM05D005959 ORTHO05D007263 8.5e-138 493.8 274 95.3
CARHR132260 Cardamine hirsuta HOM05D005959 ORTHO05D007263 1.3e-133 479.9 274 94.2
Sp4g19650 Schrenkiella parvula HOM05D005959 ORTHO05D007263 6.9e-132 474.2 272 92.3
Thhalv10017068m.g Eutrema salsugineum HOM05D005959 ORTHO05D007263 2.6e-131 472.2 272 91.9
BcaC02g07517 Brassica carinata HOM05D005959 ORTHO05D007263 3.2e-129 465.3 273 90.8
A04p28510 Brassica napus HOM05D005959 ORTHO05D007263 3.2e-129 465.3 273 91.2
BolC4t28086H Brassica oleracea HOM05D005959 ORTHO05D007263 3.2e-129 465.3 273 90.8
BraA04t18329Z Brassica rapa HOM05D005959 ORTHO05D007263 3.2e-129 465.3 273 91.2
C04p65830 Brassica napus HOM05D005959 ORTHO05D007263 9.4e-129 463.8 273 90.8
BcaC02g11852 Brassica carinata HOM05D005959 ORTHO05D007263 7.9e-128 460.7 273 90.5
BraA05t19827Z Brassica rapa HOM05D005959 ORTHO05D007263 7.9e-128 460.7 273 90.5
A05p08590 Brassica napus HOM05D005959 ORTHO05D007263 1.0e-127 460.3 273 90.1
C04p10680 Brassica napus HOM05D005959 ORTHO05D007263 3.9e-127 458.4 271 90.4
BolC4t22661H Brassica oleracea HOM05D005959 ORTHO05D007263 3.9e-127 458.4 271 90.4
BcaB02g09288 Brassica carinata HOM05D005959 ORTHO05D007263 2.0e-123 446.0 273 87.5
Gorai.009G422000 Gossypium raimondii HOM05D005959 ORTHO05D007263 4.7e-120 434.9 264 84.8
Gohir.D04G117100 Gossypium hirsutum HOM05D005959 ORTHO05D007263 1.4e-119 433.3 264 84.5
BcaB06g28984 Brassica carinata HOM05D005959 ORTHO05D007263 5.2e-119 431.4 251 92.0
Thecc.05G049500 Theobroma cacao HOM05D005959 ORTHO05D007263 6.7e-119 431.0 264 84.1
Aa31LG5G22670 Aethionema arabicum HOM05D005959 ORTHO05D007263 1.7e-117 426.4 253 89.3
Duzib093G0581 Durio zibethinus HOM05D005959 ORTHO05D007263 1.1e-116 423.7 264 82.2
Duzib106G1538 Durio zibethinus HOM05D005959 ORTHO05D007263 1.4e-116 423.3 264 82.6
Duzib128G1635 Durio zibethinus HOM05D005959 ORTHO05D007263 1.8e-116 422.9 264 82.2
Migut.L01643 Erythranthe guttata HOM05D005959 ORTHO05D007263 1.8e-116 422.9 264 82.6
Potri.016G082100 Populus trichocarpa HOM05D005959 ORTHO05D007263 1.8e-116 422.9 264 82.6
Aa31LG5G22650 Aethionema arabicum HOM05D005959 ORTHO05D007263 2.4e-116 422.5 264 83.7
Cfa017467 Carpinus fangiana HOM05D005959 ORTHO05D007263 3.1e-116 422.2 264 83.3
Manes.08G000700 Manihot esculenta HOM05D005959 ORTHO05D007263 5.3e-116 421.4 264 82.2
Potri.006G215700 Populus trichocarpa HOM05D005959 ORTHO05D007263 9.1e-116 420.6 280 78.6
Oeu026074.1 Olea europaea HOM05D005959 ORTHO05D007263 2.0e-115 419.5 264 81.4
Ciclev10012473m.g Citrus clementina HOM05D005959 ORTHO05D007263 4.5e-115 418.3 264 82.2
FAN09G4388 Fragaria x ananassa HOM05D005959 ORTHO05D007263 4.5e-115 418.3 264 80.7
Lj3A975G71 Lonicera japonica HOM05D005959 ORTHO05D007263 4.5e-115 418.3 264 81.8
FAN02G2849 Fragaria x ananassa HOM05D005959 ORTHO05D007263 5.9e-115 417.9 264 81.1
THA.LOC104823437 Tarenaya hassleriana HOM05D005959 ORTHO05D007263 5.9e-115 417.9 274 78.8
Cc06_g03270 Coffea canephora HOM05D005959 ORTHO05D007263 7.7e-115 417.5 264 81.8
Aa31LG5G22660 Aethionema arabicum HOM05D005959 ORTHO05D007263 1.0e-114 417.2 274 79.6
Haze_20691 Corylus avellana HOM05D005959 ORTHO05D007263 1.0e-114 417.2 283 78.1
Peaxi162Scf00009g00079 Petunia axillaris HOM05D005959 ORTHO05D007263 1.0e-114 417.2 264 81.8
Atru.chr8.2507 Acer truncatum HOM05D005959 ORTHO05D007263 1.3e-114 416.8 264 81.1
QL07p045958 Quercus lobata HOM05D005959 ORTHO05D007263 1.7e-114 416.4 263 81.4
FAN05G1034 Fragaria x ananassa HOM05D005959 ORTHO05D007263 2.2e-114 416.0 264 80.3
MSTRG.26742 Avicennia marina HOM05D005959 ORTHO05D007263 2.9e-114 415.6 264 81.8
PGR004G1166 Punica granatum HOM05D005959 ORTHO05D007263 2.9e-114 415.6 262 82.8
Rhsim05G0184400 Rhododendron simsii HOM05D005959 ORTHO05D007263 2.9e-114 415.6 264 81.4
RcHm_v2.0_Chr3g0468051 Rosa chinensis HOM05D005959 ORTHO05D007263 2.9e-114 415.6 264 81.1
TWI74G1319 Tripterygium wilfordii HOM05D005959 ORTHO05D007263 2.9e-114 415.6 264 82.6
FAN14G3394 Fragaria x ananassa HOM05D005959 ORTHO05D007263 3.8e-114 415.2 264 79.9
Glyma.10G047100 Glycine max HOM05D005959 ORTHO05D007263 5.0e-114 414.8 261 81.2
Eucgr.K03183 Eucalyptus grandis HOM05D005959 ORTHO05D007263 1.1e-113 413.7 276 77.9
PGSC0003DMG400017610 Solanum tuberosum HOM05D005959 ORTHO05D007263 1.1e-113 413.7 264 81.8
Solyc10g085950.2 Solanum lycopersicum HOM05D005959 ORTHO05D007263 1.5e-113 413.3 264 81.8
Hund12071 Selenicereus undatus HOM05D005959 ORTHO05D007263 2.5e-113 412.5 270 79.3
SGA_v2.0_scaffold94G28648 Striga asiatica HOM05D005959 ORTHO05D007263 2.5e-113 412.5 264 80.7
Prupe.6G245600 Prunus persica HOM05D005959 ORTHO05D007263 3.2e-113 412.1 264 81.4
Nitab4.5_0000725g0200 Nicotiana tabacum HOM05D005959 ORTHO05D007263 4.2e-113 411.8 264 80.3
unitig_578.g16043 Utricularia gibba HOM05D005959 ORTHO05D007263 1.6e-112 409.8 264 79.2
Hma1.2p1_0111F.1_g053440 Hydrangea macrophylla HOM05D005959 ORTHO05D007263 2.1e-112 409.5 264 80.3
ATR0594G178 Amborella trichopoda HOM05D005959 ORTHO05D007263 1.8e-111 406.4 274 78.1
TAR623G1105 Trochodendron aralioides HOM05D005959 ORTHO05D007263 1.8e-111 406.4 264 80.7
Ca_08807_v3 Cicer arietinum L. HOM05D005959 ORTHO05D007263 3.0e-111 405.6 262 80.9
MD12G1131100 Malus domestica HOM05D005959 ORTHO05D007263 4.0e-111 405.2 264 79.5
FvH4_6g14820 Fragaria vesca HOM05D005959 ORTHO05D007263 5.2e-111 404.8 255 81.2
Psat0s1952g0120 Pisum sativum HOM05D005959 ORTHO05D007263 5.2e-111 404.8 262 80.5
Aqoxy2G00899 Aquilegia oxysepala HOM05D005959 ORTHO05D007263 6.7e-111 404.4 257 80.9
Lj1g0020453 Lotus japonicus HOM05D005959 ORTHO05D007263 6.7e-111 404.4 262 80.2
MD04G1110300 Malus domestica HOM05D005959 ORTHO05D007263 8.8e-111 404.1 264 79.2
TPR.G21452 Trifolium pratense HOM05D005959 ORTHO05D007263 1.5e-110 403.3 262 79.8
EL10Ac7g17275 Beta vulgaris HOM05D005959 ORTHO05D007263 3.3e-110 402.1 264 79.9
CSS0020892 Camellia sinensis var. sinensis HOM05D005959 ORTHO05D007263 3.3e-110 402.1 264 78.4
arahy.Tifrunner.gnm1.ann1.R87Y2D Arachis hypogaea HOM05D005959 ORTHO05D007263 4.4e-110 401.7 266 78.6
DCAR_020866 Daucus carota HOM05D005959 ORTHO05D007263 4.4e-110 401.7 264 78.8
Lsat_1_v5_gn_6_33160 Lactuca sativa HOM05D005959 ORTHO05D007263 7.5e-110 401.0 264 77.7
Sopen10g035320 Solanum pennellii HOM05D005959 ORTHO05D007263 7.5e-110 401.0 253 83.0
Ah.15g091970 Amaranthus hybridus HOM05D005959 ORTHO05D007263 9.7e-110 400.6 264 79.2
CDE07G0433 Ceratophyllum demersum HOM05D005959 ORTHO05D007263 9.7e-110 400.6 277 74.4
HanXRQChr13g0399331 Helianthus annuus HOM05D005959 ORTHO05D007263 1.3e-109 400.2 264 78.0
CANSAT80G1914 Cannabis sativa HOM05D005959 ORTHO05D007263 2.2e-109 399.4 260 79.6
Phvul.001G172900 Phaseolus vulgaris HOM05D005959 ORTHO05D007263 3.7e-109 398.7 262 76.7
arahy.Tifrunner.gnm1.ann1.T45XFJ Arachis hypogaea HOM05D005959 ORTHO05D007263 4.8e-109 398.3 266 78.2
Medtr7g100160 Medicago truncatula HOM05D005959 ORTHO05D007263 6.3e-109 397.9 262 79.4
MBI14_g34528_MAGBIO Magnolia biondii HOM05D005959 ORTHO05D007263 1.4e-108 396.7 252 82.1
Sabra16G0089800 Salix brachista HOM05D005959 ORTHO05D007263 1.8e-108 396.4 280 75.4
Glyma.03G175800 Glycine max HOM05D005959 ORTHO05D007263 2.4e-108 396.0 262 76.7
Lj2A103T72 Lonicera japonica HOM05D005959 ORTHO05D007263 2.4e-108 396.0 259 78.4
Sc01g0003780 Simmondsia chinensis HOM05D005959 ORTHO05D007263 3.1e-108 395.6 262 77.5
Lalb_Chr25g0289351 Lupinus albus HOM05D005959 ORTHO05D007263 4.1e-108 395.2 262 76.3
ECA233G2168 Erigeron canadensis HOM05D005959 ORTHO05D007263 4.5e-107 391.7 253 80.2
CAN.G687.19 Capsicum annuum HOM05D005959 ORTHO05D007263 1.3e-106 390.2 241 83.4
Gohir.A04G077900 Gossypium hirsutum HOM05D005959 ORTHO05D007263 3.8e-106 388.7 285 74.4
PSO339G1263 Papaver somniferum HOM05D005959 ORTHO05D007263 3.8e-106 388.7 259 76.8
CsaV3_3G035240 Cucumis sativus L. HOM05D005959 ORTHO05D007263 4.2e-105 385.2 262 75.6
PSO384G3658 Papaver somniferum HOM05D005959 ORTHO05D007263 9.4e-105 384.0 259 75.7
MELO3C009294.2 Cucumis melo HOM05D005959 ORTHO05D007263 1.2e-104 383.6 262 75.2
vmacro20093 Vaccinium macrocarpon HOM05D005959 ORTHO05D007263 1.2e-104 383.6 286 73.1
HPP92_021201 Vanilla planifolia HOM05D005959 ORTHO05D007263 3.6e-104 382.1 268 71.6
Sed0012545 Sechium edule HOM05D005959 ORTHO05D007263 4.7e-104 381.7 262 74.8
Lalb_Chr20g0113031 Lupinus albus HOM05D005959 ORTHO05D007263 6.1e-104 381.3 267 73.8
GSVIVG01025576001 Vitis vinifera HOM05D005959 ORTHO05D007263 1.2e-102 377.1 225 85.8
Os05g0119000 Oryza sativa ssp. japonica HOM05D005959 ORTHO05D007263 7.5e-102 374.4 257 75.1
SEGI_41460 Sequoiadendron giganteum HOM05D005959 ORTHO05D007263 3.7e-101 372.1 266 72.9
Eucgr.A01210 Eucalyptus grandis HOM05D005959 ORTHO05D007263 8.3e-101 370.9 257 76.3
CiPaw.09G185300 Carya illinoinensis HOM05D005959 ORTHO05D007263 1.4e-100 370.2 225 84.0
Cpa.g.sc114.24 Carica papaya HOM05D005959 ORTHO05D007263 5.9e-99 364.8 237 79.7
Hma1.2p1_0111F.1_g053390 Hydrangea macrophylla HOM05D005959 ORTHO05D007263 5.9e-99 364.8 262 69.5
Hma1.2p1_0111F.1_g053380 Hydrangea macrophylla HOM05D005959 ORTHO05D007263 4.7e-96 355.1 262 68.3
Mapoly0099s0026 Marchantia polymorpha HOM05D005959 ORTHO05D007263 1.0e-95 354.0 262 69.5
Pp3c20_6820 Physcomitrium patens HOM05D005959 ORTHO05D007263 4.1e-92 342.0 255 69.0
AUR62041007 Chenopodium quinoa HOM05D005959 ORTHO05D007263 5.4e-92 341.7 264 70.5
AagrBONN_evm.TU.Sc2ySwM_344.2577 Anthoceros agrestis HOM05D005959 ORTHO05D007263 2.7e-91 339.3 269 63.6
SMO271G0174 Selaginella moellendorffii HOM05D005959 ORTHO05D007263 1.0e-87 327.4 257 65.4
COL.COLO4_10311 Corchorus olitorius HOM05D005959 ORTHO05D007263 1.4e-87 327.0 264 68.2
Dinv35677 Davidia involucrata HOM05D005959 ORTHO05D007263 1.7e-82 310.1 212 76.4
SEGI_29713 Sequoiadendron giganteum HOM05D005959 ORTHO05D007263 5.0e-82 308.5 252 65.5
CBR_g49882 Chara braunii HOM05D000019 ORTHO05D000048 4.3e-65 252.3 255 52.9
Actinidia05285 Actinidia chinensis HOM05D005959 ORTHO05D007263 5.6e-65 251.9 177 72.9
Nn2g12822 Nelumbo nucifera HOM05D005959 ORTHO05D007263 1.7e-61 240.4 160 76.9
Nitab4.5_0002073g0040 Nicotiana tabacum HOM05D005959 ORTHO05D007263 3.8e-61 239.2 264 55.3
ClCG10G020740 Citrullus lanatus HOM05D005959 ORTHO05D007263 2.7e-59 233.0 152 78.3
Actinidia11237 Actinidia chinensis HOM05D005959 ORTHO05D007263 1.9e-57 226.9 154 79.9
SMO364G0860 Selaginella moellendorffii HOM05D005959 ORTHO05D007263 3.9e-50 202.6 237 44.7
Actinidia19734 Actinidia chinensis HOM05D005959 ORTHO05D007263 2.5e-49 199.9 264 49.6
CBR_g3295 Chara braunii HOM05D005959 ORTHO05D007263 7.6e-46 188.3 250 41.2
AagrBONN_evm.TU.Sc2ySwM_344.2052 Anthoceros agrestis HOM05D005959 ORTHO05D007263 3.1e-39 166.4 233 42.1
CDE04G1398 Ceratophyllum demersum HOM05D004061 ORTHO05D004693 3.3e-33 146.4 98 70.4
Actinidia13264 Actinidia chinensis HOM05D005959 ORTHO05D007263 1.6e-32 144.1 96 78.1
AagrBONN_evm.TU.Sc2ySwM_344.389 Anthoceros agrestis HOM05D005959 ORTHO05D007263 5.3e-31 139.0 239 35.6
Nn5g28122 Nelumbo nucifera HOM05D005959 ORTHO05D007263 2.5e-28 130.2 77 84.4
MD08G1090300 Malus domestica HOM05D005959 ORTHO05D007263 8.7e-26 121.7 119 57.1
Nn1g07598 Nelumbo nucifera HOM05D005959 ORTHO05D007263 8.7e-26 121.7 75 80.0
Cre16.g673000 Chlamydomonas reinhardtii HOM05D005959 ORTHO05D007263 7.4e-25 118.6 236 34.7
TAR629G2669 Trochodendron aralioides HOM05D002023 ORTHO05D002049 4.5e-22 109.4 100 59.0
Oeu004323.1 Olea europaea HOM05D005959 ORTHO05D007263 7.4e-09 65.5 75 52.0


User provided reference genes

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