Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT2G37195 Arabidopsis thaliana HOM05D006467 ORTHO05D008012 2.3e-70 268.9 144 100.0
Thhalv10017389m.g Eutrema salsugineum HOM05D006467 ORTHO05D008012 9.8e-61 236.9 144 88.9
BraA03t11294Z Brassica rapa HOM05D006467 ORTHO05D008012 8.3e-60 233.8 144 86.8
A03p20520 Brassica napus HOM05D006467 ORTHO05D008012 1.1e-59 233.4 144 86.8
AL4G33560 Arabidopsis lyrata HOM05D006467 ORTHO05D008012 1.8e-59 232.6 134 93.3
C03p24120 Brassica napus HOM05D006467 ORTHO05D008012 3.1e-59 231.9 144 86.1
BcaC01g06644 Brassica carinata HOM05D006467 ORTHO05D008012 9.2e-59 230.3 144 85.4
BolC3t14804H Brassica oleracea HOM05D006467 ORTHO05D008012 7.8e-58 227.3 145 85.5
Sp4g19510 Schrenkiella parvula HOM05D006467 ORTHO05D008012 1.0e-57 226.9 134 88.1
CARHR131710 Cardamine hirsuta HOM05D006467 ORTHO05D008012 6.8e-54 214.2 129 88.4
Carub.0004s1909 Capsella rubella HOM05D006467 ORTHO05D008012 1.5e-53 213.0 134 85.8
Aa31LG5G22520 Aethionema arabicum HOM05D006467 ORTHO05D008012 3.7e-44 181.8 146 69.2
THA.LOC104823447 Tarenaya hassleriana HOM05D006467 ORTHO05D008012 5.4e-43 177.9 139 69.1
Thecc.05G060700 Theobroma cacao HOM05D006467 ORTHO05D008012 4.1e-35 151.8 126 65.1
MD04G1097300 Malus domestica HOM05D006467 ORTHO05D008012 3.5e-34 148.7 129 64.3
Duzib128G1557 Durio zibethinus HOM05D006467 ORTHO05D008012 1.0e-33 147.1 129 62.8
Manes.08G007300 Manihot esculenta HOM05D006467 ORTHO05D008012 2.3e-33 146.0 125 62.4
Prupe.6G236600 Prunus persica HOM05D006467 ORTHO05D008012 5.1e-33 144.8 128 60.9
MD12G1118700 Malus domestica HOM05D006467 ORTHO05D008012 1.5e-32 143.3 121 64.5
Cpa.g.sc102.12 Carica papaya HOM05D006467 ORTHO05D008012 2.5e-32 142.5 128 60.9
Potri.006G127800 Populus trichocarpa HOM05D006467 ORTHO05D008012 5.6e-32 141.4 126 57.9
Potri.016G090000 Populus trichocarpa HOM05D006467 ORTHO05D008012 7.3e-32 141.0 126 57.9
Hma1.2p1_0614F.1_g189470 Hydrangea macrophylla HOM05D006467 ORTHO05D008012 9.5e-32 140.6 125 59.2
QL07p044433 Quercus lobata HOM05D006467 ORTHO05D008012 1.2e-31 140.2 125 60.0
Atru.chr8.1867 Acer truncatum HOM05D006467 ORTHO05D008012 3.6e-31 138.7 128 58.6
CSS0042234 Camellia sinensis var. sinensis HOM05D006467 ORTHO05D008012 1.4e-30 136.7 127 58.3
Gohir.A04G074100 Gossypium hirsutum HOM05D006467 ORTHO05D008012 1.4e-30 136.7 123 61.0
FAN09G2873 Fragaria x ananassa HOM05D006467 ORTHO05D008012 2.4e-30 136.0 127 59.8
Oeu059967.1 Olea europaea HOM05D006467 ORTHO05D008012 3.1e-30 135.6 130 57.7
Lsat_1_v5_gn_2_109060 Lactuca sativa HOM05D006467 ORTHO05D008012 4.0e-30 135.2 120 56.7
FAN14G3947 Fragaria x ananassa HOM05D006467 ORTHO05D008012 6.8e-30 134.4 128 57.8
Cfa017565 Carpinus fangiana HOM05D006467 ORTHO05D008012 8.9e-30 134.0 129 58.9
CANSAT80G0273 Cannabis sativa HOM05D006467 ORTHO05D008012 1.2e-29 133.7 138 52.9
Gorai.009G417600 Gossypium raimondii HOM05D006467 ORTHO05D008012 2.0e-29 132.9 135 57.0
Peaxi162Scf00123g00014 Petunia axillaris HOM05D006467 ORTHO05D008012 2.0e-29 132.9 124 56.5
Sabra16G0095600 Salix brachista HOM05D006467 ORTHO05D008012 2.0e-29 132.9 143 52.4
Migut.J00532 Erythranthe guttata HOM05D006467 ORTHO05D008012 3.4e-29 132.1 135 54.1
Gohir.D09G145300 Gossypium hirsutum HOM05D006467 ORTHO05D008012 3.4e-29 132.1 128 59.4
Actinidia19675 Actinidia chinensis HOM05D006467 ORTHO05D008012 4.4e-29 131.7 126 55.6
ClCG10G020300 Citrullus lanatus HOM05D006467 ORTHO05D008012 4.4e-29 131.7 127 52.0
Ciclev10013106m.g Citrus clementina HOM05D006467 ORTHO05D008012 4.4e-29 131.7 124 57.3
COL.COLO4_27023 Corchorus olitorius HOM05D006467 ORTHO05D008012 4.4e-29 131.7 145 54.5
FAN02G4276 Fragaria x ananassa HOM05D006467 ORTHO05D008012 4.4e-29 131.7 127 58.3
Sed0017827 Sechium edule HOM05D006467 ORTHO05D008012 5.8e-29 131.3 127 53.5
GSVIVG01025685001 Vitis vinifera HOM05D006467 ORTHO05D008012 5.8e-29 131.3 111 63.1
Nitab4.5_0000101g0130 Nicotiana tabacum HOM05D006467 ORTHO05D008012 7.6e-29 131.0 127 55.9
RcHm_v2.0_Chr3g0469601 Rosa chinensis HOM05D006467 ORTHO05D008012 7.6e-29 131.0 127 56.7
TPR.G21203 Trifolium pratense HOM05D006467 ORTHO05D008012 9.9e-29 130.6 127 53.5
CsaV3_3G035800 Cucumis sativus L. HOM05D006467 ORTHO05D008012 1.3e-28 130.2 127 52.0
Dinv35529 Davidia involucrata HOM05D006467 ORTHO05D008012 1.3e-28 130.2 128 58.6
Nitab4.5_0003923g0010 Nicotiana tabacum HOM05D006467 ORTHO05D008012 1.3e-28 130.2 127 56.7
EL10Ac7g16554 Beta vulgaris HOM05D006467 ORTHO05D008012 2.2e-28 129.4 129 52.7
FvH4_6g15910 Fragaria vesca HOM05D006467 ORTHO05D008012 2.2e-28 129.4 135 53.3
Lj2A112T40 Lonicera japonica HOM05D006467 ORTHO05D008012 2.2e-28 129.4 123 58.5
MELO3C009340.2 Cucumis melo HOM05D006467 ORTHO05D008012 2.9e-28 129.0 127 50.4
Glyma.10G053300 Glycine max HOM05D006467 ORTHO05D008012 2.9e-28 129.0 126 54.8
PGR142G2369 Punica granatum HOM05D006467 ORTHO05D008012 2.9e-28 129.0 130 53.1
CiPaw.09G176000 Carya illinoinensis HOM05D006467 ORTHO05D008012 3.8e-28 128.6 127 53.5
TAR369G0155 Trochodendron aralioides HOM05D006467 ORTHO05D008012 4.9e-28 128.3 132 54.5
MSTRG.19165 Avicennia marina HOM05D006467 ORTHO05D008012 6.4e-28 127.9 129 55.8
HanXRQChr07g0195271 Helianthus annuus HOM05D006467 ORTHO05D008012 6.4e-28 127.9 124 54.8
SGA_v2.0_scaffold40G15542 Striga asiatica HOM05D006467 ORTHO05D008012 6.4e-28 127.9 137 52.6
VMungo0720G0455 Vigna mungo HOM05D006467 ORTHO05D008012 6.4e-28 127.9 127 52.8
Glyma.13G140300 Glycine max HOM05D006467 ORTHO05D008012 8.4e-28 127.5 128 53.1
Gohir.A09G149400 Gossypium hirsutum HOM05D006467 ORTHO05D008012 8.4e-28 127.5 128 57.8
Lj5g0010745 Lotus japonicus HOM05D006467 ORTHO05D008012 8.4e-28 127.5 127 54.3
Dinv35757 Davidia involucrata HOM05D006467 ORTHO05D008012 1.1e-27 127.1 129 57.4
CAN.G888.4 Capsicum annuum HOM05D006467 ORTHO05D008012 3.2e-27 125.6 124 54.8
TWI77G0724 Tripterygium wilfordii HOM05D006467 ORTHO05D008012 3.2e-27 125.6 135 52.6
Lalb_Chr21g0314871 Lupinus albus HOM05D006467 ORTHO05D008012 4.1e-27 125.2 127 54.3
Medtr1g064490 Medicago truncatula HOM05D006467 ORTHO05D008012 5.4e-27 124.8 127 52.0
Sopen09g002640 Solanum pennellii HOM05D006467 ORTHO05D008012 7.1e-27 124.4 131 53.4
SalBow8G4982 Salvia bowleyana HOM05D006467 ORTHO05D008012 9.2e-27 124.0 129 53.5
Sc02g0001830 Simmondsia chinensis HOM05D006467 ORTHO05D008012 1.6e-26 123.2 125 52.8
PGSC0003DMG400021546 Solanum tuberosum HOM05D006467 ORTHO05D008012 1.6e-26 123.2 131 53.4
Solyc09g007800.3 Solanum lycopersicum HOM05D006467 ORTHO05D008012 2.1e-26 122.9 131 52.7
ECA238G0062 Erigeron canadensis HOM05D006467 ORTHO05D008012 2.7e-26 122.5 120 50.8
Ca_11474_v3 Cicer arietinum L. HOM05D006467 ORTHO05D008012 3.5e-26 122.1 127 51.2
Gorai.006G166500 Gossypium raimondii HOM05D006467 ORTHO05D008012 3.5e-26 122.1 143 53.1
Phvul.007G220100 Phaseolus vulgaris HOM05D006467 ORTHO05D008012 3.5e-26 122.1 127 51.2
Nn2g13105 Nelumbo nucifera HOM05D006467 ORTHO05D008012 7.8e-26 120.9 126 51.6
Ah.15g092380 Amaranthus hybridus HOM05D006467 ORTHO05D008012 1.0e-25 120.6 127 52.8
TAR623G0732 Trochodendron aralioides HOM05D006467 ORTHO05D008012 1.0e-25 120.6 126 54.0
arahy.Tifrunner.gnm1.ann1.HNS49Q Arachis hypogaea HOM05D006467 ORTHO05D008012 1.5e-24 116.7 125 49.6
arahy.Tifrunner.gnm1.ann1.RH0WXQ Arachis hypogaea HOM05D006467 ORTHO05D008012 1.5e-24 116.7 125 49.6
arahy.Tifrunner.gnm1.ann1.VPUZ6C Arachis hypogaea HOM05D006467 ORTHO05D008012 1.5e-24 116.7 125 49.6
AUR62028561 Chenopodium quinoa HOM05D006467 ORTHO05D008012 1.9e-24 116.3 127 49.6
AUR62033514 Chenopodium quinoa HOM05D006467 ORTHO05D008012 3.3e-24 115.5 128 49.2
Aqoxy1G01232 Aquilegia oxysepala HOM05D006467 ORTHO05D008012 1.2e-23 113.6 122 50.8
Cc06_g03930 Coffea canephora HOM05D006467 ORTHO05D008012 3.6e-23 112.1 112 53.6
Sabra06G0100500 Salix brachista HOM05D006467 ORTHO05D008012 6.2e-23 111.3 161 42.9
MBI07_g19293_MAGBIO Magnolia biondii HOM05D006467 ORTHO05D008012 8.1e-23 110.9 128 47.7
PSO063G5019 Papaver somniferum HOM05D006467 ORTHO05D008012 8.1e-23 110.9 131 46.6
PSO339G1849 Papaver somniferum HOM05D006467 ORTHO05D008012 8.1e-23 110.9 131 46.6
BcaC03g13318 Brassica carinata HOM05D006467 ORTHO05D008012 1.4e-22 110.2 102 62.7
BcaC03g13319 Brassica carinata HOM05D006467 ORTHO05D008012 1.4e-22 110.2 102 62.7
Nn2g10804 Nelumbo nucifera HOM05D006467 ORTHO05D008012 1.8e-22 109.8 126 47.6
vmacro20032 Vaccinium macrocarpon HOM05D006467 ORTHO05D008012 3.1e-22 109.0 159 42.8
Eucgr.K03249 Eucalyptus grandis HOM05D006467 ORTHO05D008012 4.0e-22 108.6 99 55.6
Gohir.D04G113200 Gossypium hirsutum HOM05D006467 ORTHO05D008012 4.0e-22 108.6 98 61.2
Haze_20589 Corylus avellana HOM05D006467 ORTHO05D008012 1.3e-20 103.6 94 59.6
C07p17010 Brassica napus HOM05D006467 ORTHO05D008012 6.4e-20 101.3 96 62.5
DCAR_009295 Daucus carota HOM05D006467 ORTHO05D008012 8.4e-20 100.9 77 59.7
C02p04540 Brassica napus HOM05D006467 ORTHO05D008012 1.1e-19 100.5 96 62.5
BolC1t01590H Brassica oleracea HOM05D006467 ORTHO05D008012 4.2e-19 98.6 96 61.5
C06p12980 Brassica napus HOM05D006467 ORTHO05D008012 7.1e-19 97.8 90 64.4
Dinv37285 Davidia involucrata HOM05D006467 ORTHO05D008012 7.1e-19 97.8 84 59.5
HPP92_022407 Vanilla planifolia HOM05D006467 ORTHO05D008012 1.0e-17 94.0 124 44.4
HPP92_027503 Vanilla planifolia HOM05D006467 ORTHO05D008012 1.3e-17 93.6 117 45.3
Psat6g070840 Pisum sativum HOM05D006467 ORTHO05D008012 5.1e-17 91.7 77 54.5
Hund20246 Selenicereus undatus HOM05D006467 ORTHO05D008012 6.6e-17 91.3 77 57.1
unitig_27.g25371 Utricularia gibba HOM05D006467 ORTHO05D008012 5.6e-16 88.2 101 45.5
Zm00001eb191980 Zea mays HOM05D006467 ORTHO05D008012 6.2e-15 84.7 125 44.0
BcaC08g43911 Brassica carinata HOM05D006467 ORTHO05D008012 2.0e-13 79.7 49 81.6
Zm00001eb258270 Zea mays HOM05D006467 ORTHO05D008012 2.0e-13 79.7 121 40.5
Os02g0805700 Oryza sativa ssp. japonica HOM05D006467 ORTHO05D008012 2.2e-12 76.3 116 40.5
FvH4_1g27957 Fragaria vesca HOM05D000871 ORTHO05D008012 2.4e-11 72.8 98 49.0
ATR0048G054 Amborella trichopoda HOM05D006467 ORTHO05D008012 2.3e-09 66.2 108 36.1
FvH4_1g28030 Fragaria vesca HOM05D000871 ORTHO05D008012 2.5e-08 62.8 79 49.4
BolC2t06414H Brassica oleracea HOM05D033078 ORTHO05D041034 1.1e-06 57.4 66 54.5
A06p31240 Brassica napus HOM05D033078 ORTHO05D041034 2.4e-06 56.2 66 53.0


User provided reference genes

Program Settings