Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT2G36885 Arabidopsis thaliana HOM05D007534 ORTHO05D009540 4.5e-141 504.6 257 100.0
AL4G33100 Arabidopsis lyrata HOM05D007534 ORTHO05D009540 1.0e-132 476.9 257 94.6
Carub.0004s1873 Capsella rubella HOM05D007534 ORTHO05D009540 3.2e-115 418.7 257 84.0
CARHR131340 Cardamine hirsuta HOM05D007534 ORTHO05D009540 2.7e-114 415.6 254 83.5
BcaB02g09324 Brassica carinata HOM05D007534 ORTHO05D009540 3.7e-111 405.2 258 81.8
BcaC02g11812 Brassica carinata HOM05D007534 ORTHO05D009540 5.4e-110 401.4 257 79.8
BraA05t19860Z Brassica rapa HOM05D007534 ORTHO05D009540 2.3e-105 386.0 258 79.1
C04p11090 Brassica napus HOM05D007534 ORTHO05D009540 2.0e-104 382.9 258 78.7
BolC4t22757H Brassica oleracea HOM05D007534 ORTHO05D009540 2.2e-103 379.4 258 78.3
A05p08980 Brassica napus HOM05D007534 ORTHO05D009540 1.5e-99 366.7 258 76.4
THA.LOC104807064 Tarenaya hassleriana HOM05D007534 ORTHO05D009540 2.5e-99 365.9 260 73.1
Sp4g19170 Schrenkiella parvula HOM05D007534 ORTHO05D009540 1.8e-97 359.8 257 75.5
Thhalv10017130m.g Eutrema salsugineum HOM05D007534 ORTHO05D009540 2.3e-97 359.4 258 74.8
TAR369G0058 Trochodendron aralioides HOM05D007534 ORTHO05D009540 2.8e-90 335.9 257 68.9
Atru.chr8.1788 Acer truncatum HOM05D007534 ORTHO05D009540 9.8e-88 327.4 270 66.7
vmacro08785 Vaccinium macrocarpon HOM05D007534 ORTHO05D009540 4.9e-87 325.1 268 65.7
CANSAT80G0853 Cannabis sativa HOM05D007534 ORTHO05D009540 5.4e-86 321.6 253 66.8
Gohir.D01G204300 Gossypium hirsutum HOM05D007534 ORTHO05D009540 7.0e-86 321.2 221 72.9
Thecc.05G068400 Theobroma cacao HOM05D007534 ORTHO05D009540 1.6e-85 320.1 258 65.5
Aa31LG5G22110 Aethionema arabicum HOM05D007534 ORTHO05D009540 2.7e-85 319.3 257 67.3
Sed0017969 Sechium edule HOM05D007534 ORTHO05D009540 2.7e-85 319.3 263 65.4
ClCG04G009370 Citrullus lanatus HOM05D007534 ORTHO05D009540 6.0e-85 318.2 262 65.3
Manes.09G065300 Manihot esculenta HOM05D007534 ORTHO05D009540 6.0e-85 318.2 265 64.2
Gorai.002G246500 Gossypium raimondii HOM05D007534 ORTHO05D009540 1.3e-84 317.0 222 72.5
MSTRG.19184 Avicennia marina HOM05D007534 ORTHO05D009540 1.7e-84 316.6 229 69.9
Cpa.g.sc102.24 Carica papaya HOM05D007534 ORTHO05D009540 1.7e-84 316.6 272 65.8
AUR62042063 Chenopodium quinoa HOM05D007534 ORTHO05D009540 1.7e-84 316.6 222 70.7
TWI53G0173 Tripterygium wilfordii HOM05D007534 ORTHO05D009540 5.0e-84 315.1 264 67.0
MELO3C024472.2 Cucumis melo HOM05D007534 ORTHO05D009540 6.6e-84 314.7 183 82.0
GSVIVG01033650001 Vitis vinifera HOM05D007534 ORTHO05D009540 1.1e-83 313.9 181 84.5
Duzib093G0985 Durio zibethinus HOM05D007534 ORTHO05D009540 1.5e-83 313.5 217 71.9
Eucgr.A01668 Eucalyptus grandis HOM05D007534 ORTHO05D009540 1.9e-83 313.2 252 67.1
Aqoxy1G01139 Aquilegia oxysepala HOM05D007534 ORTHO05D009540 2.5e-83 312.8 178 85.4
Gohir.A01G213100 Gossypium hirsutum HOM05D007534 ORTHO05D009540 2.5e-83 312.8 270 63.3
CAN.G900.25 Capsicum annuum HOM05D007534 ORTHO05D009540 3.3e-83 312.4 240 67.9
Lj2A120T45 Lonicera japonica HOM05D007534 ORTHO05D009540 5.6e-83 311.6 196 79.6
COL.COLO4_26947 Corchorus olitorius HOM05D007534 ORTHO05D009540 7.3e-83 311.2 227 70.5
Prupe.7G128600 Prunus persica HOM05D007534 ORTHO05D009540 7.3e-83 311.2 265 63.4
arahy.Tifrunner.gnm1.ann1.39JB5J Arachis hypogaea HOM05D007534 ORTHO05D009540 1.6e-82 310.1 193 80.3
arahy.Tifrunner.gnm1.ann1.C885SU Arachis hypogaea HOM05D007534 ORTHO05D009540 1.6e-82 310.1 193 80.3
Potri.016G098900 Populus trichocarpa HOM05D007534 ORTHO05D009540 2.8e-82 309.3 196 78.1
CsaV3_6G039950 Cucumis sativus L. HOM05D007534 ORTHO05D009540 3.6e-82 308.9 242 65.7
Oeu005026.1 Olea europaea HOM05D007534 ORTHO05D009540 3.6e-82 308.9 260 64.6
QL07p043071 Quercus lobata HOM05D007534 ORTHO05D009540 4.7e-82 308.5 256 62.1
Sc20g0005570 Simmondsia chinensis HOM05D007534 ORTHO05D009540 1.4e-81 307.0 210 71.4
Solyc09g008270.3 Solanum lycopersicum HOM05D007534 ORTHO05D009540 1.4e-81 307.0 242 66.5
Migut.J00648 Erythranthe guttata HOM05D007534 ORTHO05D009540 3.1e-81 305.8 253 66.4
Lsat_1_v5_gn_6_24941 Lactuca sativa HOM05D007534 ORTHO05D009540 3.1e-81 305.8 242 66.1
PGSC0003DMG400003865 Solanum tuberosum HOM05D007534 ORTHO05D009540 3.1e-81 305.8 249 64.7
HanXRQChr13g0400981 Helianthus annuus HOM05D007534 ORTHO05D009540 6.8e-81 304.7 257 64.2
Lalb_Chr06g0171761 Lupinus albus HOM05D007534 ORTHO05D009540 6.8e-81 304.7 251 65.7
Ca_28252_v3 Cicer arietinum L. HOM05D007534 ORTHO05D009540 1.5e-80 303.5 177 84.7
Sabra16G0099100 Salix brachista HOM05D007534 ORTHO05D009540 1.5e-80 303.5 248 65.3
Nn2g13809 Nelumbo nucifera HOM05D007534 ORTHO05D009540 2.0e-80 303.1 225 69.8
Lj5g0014413 Lotus japonicus HOM05D007534 ORTHO05D009540 4.4e-80 302.0 190 80.5
SalBow3G3627 Salvia bowleyana HOM05D007534 ORTHO05D009540 4.4e-80 302.0 200 73.5
Sopen09g003090 Solanum pennellii HOM05D007534 ORTHO05D009540 4.4e-80 302.0 178 80.9
SGA_v2.0_scaffold75G24837 Striga asiatica HOM05D007534 ORTHO05D009540 4.4e-80 302.0 264 64.0
Dinv37321 Davidia involucrata HOM05D001037 ORTHO05D000888 7.5e-80 301.2 261 62.8
CiPaw.10G129000 Carya illinoinensis HOM05D007534 ORTHO05D009540 1.3e-79 300.4 181 80.1
Medtr1g063070 Medicago truncatula HOM05D007534 ORTHO05D009540 6.4e-79 298.1 177 83.1
Glyma.13G141700 Glycine max HOM05D007534 ORTHO05D009540 8.3e-79 297.7 259 63.3
Psat6g074600 Pisum sativum HOM05D007534 ORTHO05D009540 1.9e-78 296.6 177 82.5
ECA233G2496 Erigeron canadensis HOM05D007534 ORTHO05D009540 2.4e-78 296.2 178 79.2
Haze_20525 Corylus avellana HOM05D007534 ORTHO05D009540 5.4e-78 295.0 191 75.9
Rhsim04G0144000 Rhododendron simsii HOM05D007534 ORTHO05D009540 5.4e-78 295.0 299 58.2
Os03g0137600 Oryza sativa ssp. japonica HOM05D007534 ORTHO05D009540 2.7e-77 292.7 177 79.7
Phvul.007G147900 Phaseolus vulgaris HOM05D007534 ORTHO05D009540 7.8e-77 291.2 174 81.6
RcHm_v2.0_Chr3g0470401 Rosa chinensis HOM05D007534 ORTHO05D009540 2.3e-76 289.7 261 61.7
Zm00001eb003080 Zea mays HOM05D007534 ORTHO05D009540 8.6e-76 287.7 177 76.8
Nitab4.5_0000578g0110 Nicotiana tabacum HOM05D007534 ORTHO05D009540 4.3e-75 285.4 259 60.2
PSO266G0073 Papaver somniferum HOM05D007534 ORTHO05D009540 9.5e-75 284.3 197 70.1
Cc06_g04320 Coffea canephora HOM05D007534 ORTHO05D009540 4.0e-73 278.9 252 63.1
Ciclev10012507m.g Citrus clementina HOM05D007534 ORTHO05D009540 5.2e-73 278.5 197 70.6
Hma1.2p1_0205F.1_g086900 Hydrangea macrophylla HOM05D007534 ORTHO05D009540 1.2e-72 277.3 216 68.1
ATR0723G005 Amborella trichopoda HOM05D007534 ORTHO05D009540 2.0e-72 276.6 230 62.6
Cfa017628 Carpinus fangiana HOM05D007534 ORTHO05D009540 2.0e-72 276.6 213 67.6
MD12G1110000 Malus domestica HOM05D007534 ORTHO05D009540 5.8e-72 275.0 273 58.2
CDE09G0108 Ceratophyllum demersum HOM05D007534 ORTHO05D009540 1.1e-70 270.8 178 73.0
Actinidia32489 Actinidia chinensis HOM05D007534 ORTHO05D009540 2.4e-70 269.6 153 83.7
Mapoly0049s0045 Marchantia polymorpha HOM05D007534 ORTHO05D009540 1.6e-66 256.9 185 68.1
Ah.15g092560 Amaranthus hybridus HOM05D007534 ORTHO05D009540 3.1e-65 252.7 259 54.4
Nitab4.5_0008624g0030 Nicotiana tabacum HOM05D007534 ORTHO05D009540 2.0e-64 250.0 259 54.8
AagrBONN_evm.TU.Sc2ySwM_117.1862 Anthoceros agrestis HOM05D007534 ORTHO05D009540 2.6e-64 249.6 277 50.5
EL10Ac7g16645 Beta vulgaris HOM05D007534 ORTHO05D009540 2.6e-64 249.6 256 54.7
Peaxi162Scf00847g00032 Petunia axillaris HOM05D007534 ORTHO05D009540 2.6e-64 249.6 203 65.0
Pp3c2_17450 Physcomitrium patens HOM05D007534 ORTHO05D009540 1.9e-62 243.4 176 66.5
CSS0046236 Camellia sinensis var. sinensis HOM05D007534 ORTHO05D009540 3.6e-58 229.2 215 59.1
TPR.G11259 Trifolium pratense HOM05D007534 ORTHO05D009540 2.4e-57 226.5 123 89.4
PGR004G0787 Punica granatum HOM05D007534 ORTHO05D009540 1.7e-55 220.3 205 62.9
Hma1.2p1_0828F.1_g225100 Hydrangea macrophylla HOM05D007534 ORTHO05D009540 2.9e-55 219.5 125 84.0
Cre02.g143450 Chlamydomonas reinhardtii HOM05D007534 ORTHO05D009540 1.5e-48 197.2 184 56.5
unitig_22.g5100 Utricularia gibba HOM05D007534 ORTHO05D009540 6.4e-47 191.8 134 70.1
QL03p002371 Quercus lobata HOM05D007534 ORTHO05D009540 2.3e-44 183.3 174 56.9
AUR62026915 Chenopodium quinoa HOM05D007534 ORTHO05D009540 5.1e-44 182.2 157 59.9
FAN15G1333 Fragaria x ananassa HOM05D007534 ORTHO05D009540 9.0e-41 171.4 94 85.1
MD04G1092000 Malus domestica HOM05D007534 ORTHO05D009540 3.7e-34 149.4 129 62.0
CSS0001990 Camellia sinensis var. sinensis HOM05D007534 ORTHO05D012079 4.6e-29 132.5 75 82.7
ATR0680G419 Amborella trichopoda HOM05D007534 ORTHO05D009540 4.8e-26 122.5 65 86.2
Rhsim04G0142700 Rhododendron simsii HOM05D007534 ORTHO05D009540 7.4e-19 98.6 56 85.7
MD04G1092200 Malus domestica HOM05D007534 ORTHO05D009540 4.8e-10 69.3 85 44.7


User provided reference genes

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