Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT2G35612 Arabidopsis thaliana HOM05D008950 ORTHO05D009662 2.7e-45 184.9 87 100.0
AL4G31660 Arabidopsis lyrata HOM05D008950 ORTHO05D009662 6.6e-44 180.3 87 97.7
BcaB06g28851 Brassica carinata HOM05D008950 ORTHO05D009662 2.9e-39 164.9 85 88.2
BcaNung07014 Brassica carinata HOM05D008950 ORTHO05D009662 2.9e-39 164.9 85 88.2
BcaC02g11679 Brassica carinata HOM05D008950 ORTHO05D009662 4.9e-39 164.1 85 88.2
C04p64430 Brassica napus HOM05D008950 ORTHO05D009662 2.4e-38 161.8 85 85.9
BolC4t27927H Brassica oleracea HOM05D008950 ORTHO05D009662 2.4e-38 161.8 85 85.9
BraA04t18203Z Brassica rapa HOM05D008950 ORTHO05D009662 2.4e-38 161.8 85 85.9
C04p12490 Brassica napus HOM05D008950 ORTHO05D009662 3.2e-38 161.4 85 87.1
BolC4t22897H Brassica oleracea HOM05D008950 ORTHO05D009662 3.2e-38 161.4 85 87.1
Carub.0004s1731 Capsella rubella HOM05D008950 ORTHO05D009662 5.4e-38 160.6 88 88.6
Sp4g17830 Schrenkiella parvula HOM05D008950 ORTHO05D009662 7.0e-38 160.2 84 88.1
A04p27020 Brassica napus HOM05D008950 ORTHO05D009662 9.2e-38 159.8 85 84.7
CARHR129810 Cardamine hirsuta HOM05D008950 ORTHO05D009662 9.2e-38 159.8 88 88.6
BcaB02g09411 Brassica carinata HOM05D008950 ORTHO05D009662 3.5e-37 157.9 87 85.1
BcaC01g05722 Brassica carinata HOM05D008950 ORTHO05D009662 4.6e-37 157.5 84 85.7
C03p22840 Brassica napus HOM05D008950 ORTHO05D009662 4.6e-37 157.5 84 85.7
BolC3t14683H Brassica oleracea HOM05D008950 ORTHO05D009662 4.6e-37 157.5 84 85.7
Thhalv10017493m.g Eutrema salsugineum HOM05D008950 ORTHO05D009662 7.8e-37 156.8 85 87.1
A05p10110 Brassica napus HOM05D008950 ORTHO05D009662 1.7e-36 155.6 85 84.7
BraA05t19952Z Brassica rapa HOM05D008950 ORTHO05D009662 1.7e-36 155.6 85 84.7
A03p19580 Brassica napus HOM05D008950 ORTHO05D009662 3.0e-36 154.8 84 84.5
BraA03t11211Z Brassica rapa HOM05D008950 ORTHO05D009662 3.0e-36 154.8 84 84.5
Aa31LG9G15810 Aethionema arabicum HOM05D008950 ORTHO05D009662 1.1e-22 109.8 91 64.8
AT1G31670 Arabidopsis thaliana HOM05D000637 ORTHO05D001881 2.3e-20 102.1 91 59.3
BcaB04g18142 Brassica carinata HOM05D008950 ORTHO05D009662 6.6e-20 100.5 94 58.5
Carub.0001s2999 Capsella rubella HOM05D008950 ORTHO05D009662 6.6e-20 100.5 95 58.9
A08p10480 Brassica napus HOM05D008950 ORTHO05D009662 1.1e-19 99.8 94 56.4
BraA08t33047Z Brassica rapa HOM05D008950 ORTHO05D009662 1.1e-19 99.8 94 56.4
BcaC07g37748 Brassica carinata HOM05D008950 ORTHO05D009662 3.3e-19 98.2 94 55.3
BcaC07g37749 Brassica carinata HOM05D008950 ORTHO05D009662 3.3e-19 98.2 94 55.3
BolC8t48128H Brassica oleracea HOM05D008950 ORTHO05D009662 3.3e-19 98.2 94 55.3
CARHR286940 Cardamine hirsuta HOM05D008950 ORTHO05D009662 1.2e-16 89.7 94 52.1
THA.LOC109116613 Tarenaya hassleriana HOM05D008950 ORTHO05D009662 1.5e-16 89.4 82 59.8
Sp1g27350 Schrenkiella parvula HOM05D008950 ORTHO05D009662 1.3e-15 86.3 49 79.6
Thhalv10009878m.g Eutrema salsugineum HOM05D008950 ORTHO05D009662 1.7e-15 85.9 90 52.2
Potri.004G234800 Populus trichocarpa HOM05D008950 ORTHO05D009662 7.8e-13 77.0 80 51.2
Sabra01G0179500 Salix brachista HOM05D008950 ORTHO05D009662 3.3e-11 71.6 98 45.9
Thhalv10009664m.g Eutrema salsugineum HOM05D008950 ORTHO05D009662 2.1e-10 68.9 89 44.9
Atru.chr6.2152 Acer truncatum HOM05D006782 ORTHO05D009662 5.8e-08 60.8 83 44.6
Manes.17G001300 Manihot esculenta HOM05D006782 ORTHO05D009662 1.7e-07 59.3 77 40.3
Haze_07985 Corylus avellana HOM05D006782 ORTHO05D009662 8.4e-07 57.0 80 45.0
Duzib205G1200 Durio zibethinus HOM05D006782 ORTHO05D009662 8.4e-07 57.0 85 42.4
Cfa021287 Carpinus fangiana HOM05D006782 ORTHO05D009662 1.1e-06 56.6 77 39.0
CiPaw.11G078800 Carya illinoinensis HOM05D006782 ORTHO05D009662 1.4e-06 56.2 85 37.6
QL12p003438 Quercus lobata HOM05D006782 ORTHO05D009662 1.9e-06 55.8 82 39.0
Gohir.A08G148500 Gossypium hirsutum HOM05D006782 ORTHO05D009662 4.2e-06 54.7 78 43.6
Gohir.D08G169600 Gossypium hirsutum HOM05D006782 ORTHO05D009662 9.3e-06 53.5 78 42.3
Manes.15G184800 Manihot esculenta HOM05D006782 ORTHO05D009662 9.3e-06 53.5 80 41.2


User provided reference genes

Program Settings