Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT2G35090 Arabidopsis thaliana HOM05D041539 ORTHO05D031452 1.5e-70 269.6 159 100.0
AT2G35070 Arabidopsis thaliana HOM05D041539 ORTHO05D031452 3.6e-56 221.9 159 80.5
Carub.0004s1677 Capsella rubella HOM05D041539 ORTHO05D031452 2.1e-40 169.5 169 59.2
CARHR106700 Cardamine hirsuta HOM05D001544 ORTHO05D002732 9.6e-09 64.3 176 31.2
AL3G52640 Arabidopsis lyrata HOM05D001544 ORTHO05D002732 3.6e-08 62.4 176 30.7
AT2G16460 Arabidopsis thaliana HOM05D001544 ORTHO05D002732 3.6e-08 62.4 176 30.7
Carub.0003s3022 Capsella rubella HOM05D001544 ORTHO05D002732 3.6e-08 62.4 176 30.7
Peaxi162Scf00083g01313 Petunia axillaris HOM05D001544 ORTHO05D002732 3.6e-08 62.4 155 30.3
BcaB07g31771 Brassica carinata HOM05D001544 ORTHO05D002732 1.1e-07 60.8 176 30.1
BcaC04g23019 Brassica carinata HOM05D001544 ORTHO05D002732 1.1e-07 60.8 176 30.1
A09p10990 Brassica napus HOM05D001544 ORTHO05D002732 1.1e-07 60.8 176 30.1
C09p13000 Brassica napus HOM05D001544 ORTHO05D002732 1.1e-07 60.8 176 30.1
BolC9t54192H Brassica oleracea HOM05D001544 ORTHO05D002732 1.1e-07 60.8 176 30.1
BraA09t36739Z Brassica rapa HOM05D001544 ORTHO05D002732 1.1e-07 60.8 176 30.1
Thhalv10022836m.g Eutrema salsugineum HOM05D001544 ORTHO05D002732 1.1e-07 60.8 176 30.1
MD00G1040600 Malus domestica HOM05D001544 ORTHO05D002732 1.1e-07 60.8 198 28.8
Sp3g29740 Schrenkiella parvula HOM05D001544 ORTHO05D002732 1.1e-07 60.8 176 30.1
Nitab4.5_0007444g0010 Nicotiana tabacum HOM05D001544 ORTHO05D002732 2.4e-07 59.7 152 29.6
QL11p046070 Quercus lobata HOM05D001544 ORTHO05D002732 3.1e-07 59.3 176 27.8
Aa31LG8G13800 Aethionema arabicum HOM05D001544 ORTHO05D002732 4.0e-07 58.9 176 29.0
Oeu063193.2 Olea europaea HOM05D001544 ORTHO05D002732 5.3e-07 58.5 193 26.4
TPR.G33380 Trifolium pratense HOM05D001544 ORTHO05D002732 5.3e-07 58.5 194 28.4
Duzib132G0738 Durio zibethinus HOM05D001544 ORTHO05D002732 6.9e-07 58.2 156 30.1
Prupe.8G086000 Prunus persica HOM05D001544 ORTHO05D002732 6.9e-07 58.2 198 27.8
Gohir.A03G198700 Gossypium hirsutum HOM05D001544 ORTHO05D002732 9.0e-07 57.8 176 27.3
Gohir.D02G220100 Gossypium hirsutum HOM05D001544 ORTHO05D002732 9.0e-07 57.8 176 27.3
Psat4g098200 Pisum sativum HOM05D001544 ORTHO05D002732 9.0e-07 57.8 196 28.6
Sabra07G0013500 Salix brachista HOM05D001544 ORTHO05D002732 9.0e-07 57.8 185 25.9
Actinidia21488 Actinidia chinensis HOM05D001544 ORTHO05D002732 1.2e-06 57.4 177 28.2
Phvul.009G003700 Phaseolus vulgaris HOM05D001544 ORTHO05D002732 1.2e-06 57.4 176 26.1
Eucgr.I01323 Eucalyptus grandis HOM05D001544 ORTHO05D002732 1.5e-06 57.0 176 27.8
Gohir.A13G030700 Gossypium hirsutum HOM05D001544 ORTHO05D002732 1.5e-06 57.0 176 27.3
Gohir.D13G028700 Gossypium hirsutum HOM05D001544 ORTHO05D002732 1.5e-06 57.0 176 27.3
Gorai.013G032700 Gossypium raimondii HOM05D001544 ORTHO05D002732 1.5e-06 57.0 176 27.3
Lsat_1_v5_gn_8_128700 Lactuca sativa HOM05D001544 ORTHO05D002732 1.5e-06 57.0 176 27.8
Manes.04G084100 Manihot esculenta HOM05D001544 ORTHO05D002732 1.5e-06 57.0 156 27.6
Nitab4.5_0001317g0080 Nicotiana tabacum HOM05D001544 ORTHO05D002732 1.5e-06 57.0 172 28.5
VMungo0251G0953 Vigna mungo HOM05D002906 ORTHO05D003211 1.5e-06 57.0 184 28.3
CAN.G332.5 Capsicum annuum HOM05D001544 ORTHO05D002732 2.0e-06 56.6 172 28.5
Lj5A190G56 Lonicera japonica HOM05D001544 ORTHO05D002732 2.0e-06 56.6 176 27.3
Solyc10g054320.2 Solanum lycopersicum HOM05D001544 ORTHO05D002732 2.0e-06 56.6 172 28.5
Sopen10g024220 Solanum pennellii HOM05D001544 ORTHO05D002732 2.0e-06 56.6 172 28.5
ATR0661G061 Amborella trichopoda HOM05D001544 ORTHO05D002732 2.6e-06 56.2 176 27.3
CSS0014391 Camellia sinensis var. sinensis HOM05D001544 ORTHO05D002732 3.4e-06 55.8 156 29.5
HanXRQChr17g0558591 Helianthus annuus HOM05D001544 ORTHO05D002732 3.4e-06 55.8 176 27.8
Nitab4.5_0010830g0020 Nicotiana tabacum HOM05D001544 ORTHO05D002732 3.4e-06 55.8 129 31.0
Peaxi162Scf00003g00069 Petunia axillaris HOM05D001544 ORTHO05D002732 3.4e-06 55.8 172 28.5
PGR142G1251 Punica granatum HOM05D001544 ORTHO05D002732 3.4e-06 55.8 176 27.3
Thecc.02G076300 Theobroma cacao HOM05D001544 ORTHO05D002732 3.4e-06 55.8 176 26.7
Ca_22360_v3 Cicer arietinum L. HOM05D001544 ORTHO05D002732 4.5e-06 55.5 184 27.7
Duzib248G1442 Durio zibethinus HOM05D001544 ORTHO05D002732 4.5e-06 55.5 176 26.1
Gorai.005G248000 Gossypium raimondii HOM05D001544 ORTHO05D002732 4.5e-06 55.5 176 26.7
Hma1.2p1_0066F.1_g035810 Hydrangea macrophylla HOM05D001544 ORTHO05D002732 4.5e-06 55.5 176 27.3
Medtr5g021410 Medicago truncatula HOM05D001544 ORTHO05D002732 4.5e-06 55.5 176 26.1
Medtr8g076260 Medicago truncatula HOM05D001544 ORTHO05D002732 4.5e-06 55.5 196 28.1
Nitab4.5_0002723g0020 Nicotiana tabacum HOM05D001544 ORTHO05D002732 4.5e-06 55.5 172 29.7
CSS0011805 Camellia sinensis var. sinensis HOM05D001544 ORTHO05D002732 5.8e-06 55.1 176 26.7
COL.COLO4_26034 Corchorus olitorius HOM05D001544 ORTHO05D002732 5.8e-06 55.1 176 26.7
DCAR_003681 Daucus carota HOM05D001544 ORTHO05D002732 5.8e-06 55.1 195 28.7
Lj1g0008443 Lotus japonicus HOM05D001544 ORTHO05D002732 5.8e-06 55.1 176 26.1
Manes.01G142500 Manihot esculenta HOM05D001544 ORTHO05D002732 5.8e-06 55.1 176 26.7
Sc08g0000820 Simmondsia chinensis HOM05D001544 ORTHO05D002732 5.8e-06 55.1 176 25.6
TAR381G1461 Trochodendron aralioides HOM05D001544 ORTHO05D002732 5.8e-06 55.1 176 29.0
MBI05_g30027_MAGBIO Magnolia biondii HOM05D001544 ORTHO05D002732 7.6e-06 54.7 176 26.1
HPP92_025420 Vanilla planifolia HOM05D001544 ORTHO05D002732 7.6e-06 54.7 176 26.7
Ca_15339_v3 Cicer arietinum L. HOM05D001544 ORTHO05D002732 9.9e-06 54.3 176 27.3
Ciclev10029230m.g Citrus clementina HOM05D001544 ORTHO05D002732 9.9e-06 54.3 176 26.7
Dinv42006 Davidia involucrata HOM05D001544 ORTHO05D002732 9.9e-06 54.3 176 26.1
HPP92_025875 Vanilla planifolia HOM05D001544 ORTHO05D002732 9.9e-06 54.3 194 27.3


User provided reference genes

Program Settings