Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT2G34610 Arabidopsis thaliana HOM05D007074 ORTHO05D008542 1.0e-141 506.9 291 100.0
AL4G30590 Arabidopsis lyrata HOM05D007074 ORTHO05D008542 1.7e-99 366.7 292 79.8
AL270U10020 Arabidopsis lyrata HOM05D007074 ORTHO05D008542 1.1e-98 364.0 292 79.1
Carub.0004s1629 Capsella rubella HOM05D007074 ORTHO05D008542 1.4e-90 337.0 297 69.4
Thhalv10017803m.g Eutrema salsugineum HOM05D007074 ORTHO05D008542 2.2e-80 303.1 288 63.2
CARHR128710 Cardamine hirsuta HOM05D007074 ORTHO05D008542 8.3e-75 284.6 290 66.6
BolC4t27860H Brassica oleracea HOM05D007074 ORTHO05D008542 1.4e-74 283.9 290 60.0
A04p26510 Brassica napus HOM05D007074 ORTHO05D008542 1.2e-73 280.8 291 61.2
C04p63930 Brassica napus HOM05D007074 ORTHO05D008542 1.2e-73 280.8 291 61.2
BraA05t20049Z Brassica rapa HOM05D007074 ORTHO05D008542 3.5e-73 279.3 290 60.0
BraA04t18155Z Brassica rapa HOM05D007074 ORTHO05D008542 2.3e-72 276.6 291 60.8
A05p11040 Brassica napus HOM05D007074 ORTHO05D008542 2.9e-72 276.2 290 59.0
Sp4g16880 Schrenkiella parvula HOM05D007074 ORTHO05D008542 2.5e-71 273.1 301 55.8
BcaB02g09522 Brassica carinata HOM05D007074 ORTHO05D008542 3.0e-69 266.2 289 57.8
BcaC02g11538 Brassica carinata HOM05D007074 ORTHO05D008542 2.0e-68 263.5 300 56.0
BcaB06g28786 Brassica carinata HOM05D007074 ORTHO05D008542 2.6e-68 263.1 288 57.6
C04p14170 Brassica napus HOM05D007074 ORTHO05D008542 5.7e-68 261.9 300 55.7
BolC4t23006H Brassica oleracea HOM05D007074 ORTHO05D008542 5.7e-68 261.9 300 55.7
THA.LOC104814307 Tarenaya hassleriana HOM05D007074 ORTHO05D008542 1.4e-50 204.1 295 47.8
BcaB07g32617 Brassica carinata HOM05D007074 ORTHO05D008542 7.1e-50 201.8 300 44.7
Thhalv10008361m.g Eutrema salsugineum HOM05D007074 ORTHO05D008542 7.1e-50 201.8 312 44.9
Sp1g26010 Schrenkiella parvula HOM05D007074 ORTHO05D008542 2.1e-49 200.3 303 48.2
Carub.0001s2842 Capsella rubella HOM05D007074 ORTHO05D008542 4.3e-47 192.6 308 45.5
A09p36350 Brassica napus HOM05D007074 ORTHO05D008542 7.3e-47 191.8 301 46.8
BraA09t39159Z Brassica rapa HOM05D007074 ORTHO05D008542 7.3e-47 191.8 301 46.8
AL1G44090 Arabidopsis lyrata HOM05D007074 ORTHO05D008542 1.2e-46 191.0 296 47.6
AL700U10010 Arabidopsis lyrata HOM05D007074 ORTHO05D008542 1.2e-46 191.0 296 47.6
BcaC05g27044 Brassica carinata HOM05D007074 ORTHO05D008542 2.8e-46 189.9 302 46.0
C05p29030 Brassica napus HOM05D007074 ORTHO05D008542 2.8e-46 189.9 302 46.0
BolC5t31631H Brassica oleracea HOM05D007074 ORTHO05D008542 2.8e-46 189.9 302 46.0
Aa31LG10G6790 Aethionema arabicum HOM05D007074 ORTHO05D008542 4.0e-45 186.0 285 46.7
CARHR029240 Cardamine hirsuta HOM05D007074 ORTHO05D008542 2.0e-44 183.7 297 44.4
AT1G30190 Arabidopsis thaliana HOM05D007074 ORTHO05D008542 1.7e-43 180.6 298 45.6
A07p10060 Brassica napus HOM05D007074 ORTHO05D008542 1.7e-43 180.6 298 43.0
BraA07t28799Z Brassica rapa HOM05D007074 ORTHO05D008542 1.7e-43 180.6 298 43.0
BcaB03g13841 Brassica carinata HOM05D007074 ORTHO05D008542 1.1e-42 177.9 293 43.7
THA.LOC104820655 Tarenaya hassleriana HOM05D007074 ORTHO05D008542 2.9e-35 153.3 297 40.4
Aa31LG6G5540 Aethionema arabicum HOM05D007074 ORTHO05D008542 3.0e-24 116.7 375 30.4
Thecc.06G148300 Theobroma cacao HOM05D007074 ORTHO05D008542 3.5e-17 93.2 298 30.9
BcaC06g35492 Brassica carinata HOM05D007074 ORTHO05D008542 1.1e-15 88.2 230 39.6
BolC7t42036H Brassica oleracea HOM05D007074 ORTHO05D008542 1.1e-15 88.2 230 39.6
FAN16G0984 Fragaria x ananassa HOM05D007074 ORTHO05D008542 4.8e-14 82.8 285 30.9
Duzib235G1065 Durio zibethinus HOM05D007074 ORTHO05D008542 6.2e-14 82.4 296 30.7
Prupe.4G082900 Prunus persica HOM05D007074 ORTHO05D008542 8.1e-14 82.0 298 29.9
COL.COLO4_31042 Corchorus olitorius HOM05D007074 ORTHO05D008542 1.1e-13 81.6 274 31.0
FAN25G3808 Fragaria x ananassa HOM05D007074 ORTHO05D008542 1.1e-13 81.6 281 30.2
MD10G1260500 Malus domestica HOM05D007074 ORTHO05D008542 1.1e-13 81.6 287 31.7
Gorai.009G154100 Gossypium raimondii HOM05D007074 ORTHO05D008542 2.4e-13 80.5 269 30.5
Gohir.D05G150000 Gossypium hirsutum HOM05D007074 ORTHO05D008542 3.1e-13 80.1 269 30.5
Hma1.2p1_0020F.1_g014170 Hydrangea macrophylla HOM05D007074 ORTHO05D008542 5.3e-13 79.3 266 30.5
Phvul.006G166000 Phaseolus vulgaris HOM05D007074 ORTHO05D008542 5.3e-13 79.3 275 29.8
QL05p057294 Quercus lobata HOM05D007074 ORTHO05D008542 9.0e-13 78.6 296 29.4
FAN21G0051 Fragaria x ananassa HOM05D007074 ORTHO05D008542 2.0e-12 77.4 289 29.8
Gohir.A05G147500 Gossypium hirsutum HOM05D007074 ORTHO05D008542 3.4e-12 76.6 274 30.7
Ciclev10017572m.g Citrus clementina HOM05D007074 ORTHO05D008542 4.5e-12 76.3 295 30.2
MD05G1281700 Malus domestica HOM05D007074 ORTHO05D008542 5.8e-12 75.9 287 30.0
CiPaw.10G090600 Carya illinoinensis HOM05D007074 ORTHO05D008542 7.6e-12 75.5 276 30.4
Manes.17G071900 Manihot esculenta HOM05D007074 ORTHO05D008542 1.3e-11 74.7 294 31.0
Glyma.15G092900 Glycine max HOM05D007074 ORTHO05D008542 3.8e-11 73.2 284 30.6
TWI53G1156 Tripterygium wilfordii HOM05D007074 ORTHO05D008542 3.8e-11 73.2 277 31.4
FvH4_3g05300 Fragaria vesca HOM05D007074 ORTHO05D008542 1.4e-10 71.2 279 29.7
Glyma.13G219300 Glycine max HOM05D007074 ORTHO05D008542 2.5e-10 70.5 284 30.6
Manes.15G123200 Manihot esculenta HOM05D007074 ORTHO05D008542 3.2e-10 70.1 289 30.4
TWI73G0984 Tripterygium wilfordii HOM05D007074 ORTHO05D008542 7.1e-10 68.9 283 27.6
TPR.G26250 Trifolium pratense HOM05D007074 ORTHO05D008542 2.1e-09 67.4 305 27.5
Cfa000927 Carpinus fangiana HOM05D007074 ORTHO05D008542 6.0e-09 65.9 296 30.7
Nn3g20397 Nelumbo nucifera HOM05D007074 ORTHO05D008542 6.0e-09 65.9 269 27.5
Medtr2g019160 Medicago truncatula HOM05D007074 ORTHO05D008542 1.0e-08 65.1 278 29.1
arahy.Tifrunner.gnm1.ann1.4BL86F Arachis hypogaea HOM05D007074 ORTHO05D008542 3.0e-08 63.5 234 29.1
Lalb_Chr20g0117821 Lupinus albus HOM05D007074 ORTHO05D008542 3.0e-08 63.5 302 27.8
PGR031G2887 Punica granatum HOM05D007074 ORTHO05D008542 3.0e-08 63.5 266 30.5
Lj6g0018330 Lotus japonicus HOM05D007074 ORTHO05D008542 5.1e-08 62.8 290 26.2
CiPaw.09G122000 Carya illinoinensis HOM05D007074 ORTHO05D008542 6.7e-08 62.4 261 28.4
Oeu034132.1 Olea europaea HOM05D007074 ORTHO05D008542 6.7e-08 62.4 289 27.3
Psat1g191080 Pisum sativum HOM05D007074 ORTHO05D008542 5.7e-07 59.3 264 28.0
Nn4g26598 Nelumbo nucifera HOM05D007074 ORTHO05D008542 1.3e-06 58.2 278 28.4
Psat1g191160 Pisum sativum HOM05D007074 ORTHO05D008542 1.3e-06 58.2 265 26.8
VMungo0540G2047 Vigna mungo HOM05D007074 ORTHO05D008542 8.2e-06 55.5 227 29.1


User provided reference genes

Program Settings