Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT2G34310 Arabidopsis thaliana HOM05D008719 ORTHO05D010898 2.7e-127 458.8 243 100.0
AL4G30240 Arabidopsis lyrata HOM05D008719 ORTHO05D010898 2.7e-103 379.0 244 86.1
Carub.0004s1595 Capsella rubella HOM05D008719 ORTHO05D010898 1.1e-75 287.3 263 66.9
Thhalv10017155m.g Eutrema salsugineum HOM05D008719 ORTHO05D010898 5.3e-75 285.0 258 68.2
CARHR128380 Cardamine hirsuta HOM05D008719 ORTHO05D010898 5.7e-61 238.4 250 62.0
Sp4g16580 Schrenkiella parvula HOM05D008719 ORTHO05D010898 2.8e-60 236.1 257 59.1
BcaB02g09560 Brassica carinata HOM05D008719 ORTHO05D010898 3.4e-58 229.2 255 59.6
BcaB06g28746 Brassica carinata HOM05D008719 ORTHO05D010898 2.2e-57 226.5 245 59.6
C04p63660 Brassica napus HOM05D008719 ORTHO05D010898 7.7e-50 201.4 247 55.9
BraA04t18131Z Brassica rapa HOM05D008719 ORTHO05D010898 1.3e-49 200.7 247 55.5
A04p26270 Brassica napus HOM05D008719 ORTHO05D010898 6.5e-49 198.4 247 54.7
BolC4t27834H Brassica oleracea HOM05D008719 ORTHO05D010898 6.5e-49 198.4 246 55.7
A05p11350 Brassica napus HOM05D008719 ORTHO05D010898 8.5e-49 198.0 256 55.9
Thhalv10008596m.g Eutrema salsugineum HOM05D008719 ORTHO05D010898 3.9e-46 189.1 260 50.4
Sp1g25470 Schrenkiella parvula HOM05D008719 ORTHO05D010898 3.9e-46 189.1 265 50.9
C04p14710 Brassica napus HOM05D008719 ORTHO05D010898 2.6e-45 186.4 259 52.5
CARHR028920 Cardamine hirsuta HOM05D008719 ORTHO05D010898 2.9e-41 172.9 261 49.4
AT1G29530 Arabidopsis thaliana HOM05D008719 ORTHO05D010898 6.1e-39 165.2 259 47.5
A09p36830 Brassica napus HOM05D008719 ORTHO05D010898 1.4e-38 164.1 249 48.6
BraA09t39201Z Brassica rapa HOM05D008719 ORTHO05D010898 1.4e-38 164.1 249 48.6
AL1G43370 Arabidopsis lyrata HOM05D008719 ORTHO05D010898 3.0e-38 162.9 260 47.7
Carub.0001s2776 Capsella rubella HOM05D008719 ORTHO05D010898 2.0e-37 160.2 263 46.8
BcaC01g00117 Brassica carinata HOM05D008719 ORTHO05D010898 2.7e-31 139.8 245 43.3
Aa31LG6G6070 Aethionema arabicum HOM05D008719 ORTHO05D010898 2.2e-28 130.2 332 37.7
BcaB03g12165 Brassica carinata HOM05D008719 ORTHO05D010898 2.2e-28 130.2 262 40.8
BcaB07g32545 Brassica carinata HOM05D008719 ORTHO05D010898 2.8e-28 129.8 248 42.3
THA.LOC104820622 Tarenaya hassleriana HOM05D008719 ORTHO05D010898 6.3e-28 128.6 244 40.2
A08p25000 Brassica napus HOM05D008719 ORTHO05D010898 2.4e-27 126.7 254 40.6
BraA08t34455Z Brassica rapa HOM05D008719 ORTHO05D010898 2.4e-27 126.7 254 40.6
C03p75980 Brassica napus HOM05D008719 ORTHO05D010898 1.6e-26 124.0 246 42.7
BolC3t19849H Brassica oleracea HOM05D008719 ORTHO05D010898 4.5e-26 122.5 246 42.3
C07p16190 Brassica napus HOM05D008719 ORTHO05D010898 6.3e-20 102.1 256 37.1
BcaC02g11497 Brassica carinata HOM05D008719 ORTHO05D010898 3.2e-19 99.8 93 64.5
BcaC05g26977 Brassica carinata HOM05D008719 ORTHO05D010898 2.7e-18 96.7 257 38.1
BolC5t31555H Brassica oleracea HOM05D008719 ORTHO05D010898 2.7e-18 96.7 257 38.1
C05p28330 Brassica napus HOM05D008719 ORTHO05D010898 3.5e-18 96.3 257 38.1
BcaB03g13879 Brassica carinata HOM05D008719 ORTHO05D010898 5.9e-18 95.5 263 37.3
THA.LOC104814270 Tarenaya hassleriana HOM05D008719 ORTHO05D010898 6.6e-17 92.0 252 34.5
BraA07t28855Z Brassica rapa HOM05D008719 ORTHO05D010898 2.8e-15 86.7 282 33.7
BolC7t42112H Brassica oleracea HOM05D008719 ORTHO05D010898 3.6e-15 86.3 214 38.3
A07p10610 Brassica napus HOM05D008719 ORTHO05D010898 8.9e-14 81.6 266 33.8
A03p19070 Brassica napus HOM05D008719 ORTHO05D010898 6.4e-12 75.5 75 64.0
BraA03t11165Z Brassica rapa HOM05D008719 ORTHO05D010898 6.4e-12 75.5 75 64.0
Lalb_Chr08g0233301 Lupinus albus HOM05D009013 ORTHO05D009761 1.6e-07 60.8 298 27.9
Glyma.15G195700 Glycine max HOM05D009013 ORTHO05D009761 8.0e-07 58.5 319 29.5
Glyma.09G085700 Glycine max HOM05D009013 ORTHO05D009761 1.1e-06 58.2 341 28.7
Phvul.009G214600 Phaseolus vulgaris HOM05D009013 ORTHO05D009761 1.1e-06 58.2 335 29.0
Glyma.13G051300 Glycine max HOM05D009013 ORTHO05D009761 1.8e-06 57.4 63 49.2


User provided reference genes

Program Settings