Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT2G33830 Arabidopsis thaliana HOM05D003630 ORTHO05D004151 1.3e-57 226.1 107 100.0
Carub.0004s1550 Capsella rubella HOM05D003630 ORTHO05D004151 1.7e-54 215.7 109 95.4
AL4G29600 Arabidopsis lyrata HOM05D003630 ORTHO05D004151 1.9e-53 212.2 107 94.4
BcaB02g10597 Brassica carinata HOM05D003630 ORTHO05D004151 1.6e-52 209.1 109 93.6
BcaC02g11461 Brassica carinata HOM05D003630 ORTHO05D004151 1.6e-52 209.1 109 93.6
BcaB01g03917 Brassica carinata HOM05D003630 ORTHO05D004151 2.1e-52 208.8 109 90.8
BcaC01g05821 Brassica carinata HOM05D003630 ORTHO05D004151 2.1e-52 208.8 109 90.8
BcaC01g05822 Brassica carinata HOM05D003630 ORTHO05D004151 2.1e-52 208.8 109 90.8
A03p18920 Brassica napus HOM05D003630 ORTHO05D004151 2.1e-52 208.8 109 90.8
C04p15210 Brassica napus HOM05D003630 ORTHO05D004151 2.1e-52 208.8 109 93.6
BolC4t23094H Brassica oleracea HOM05D003630 ORTHO05D004151 2.1e-52 208.8 109 93.6
BraA03t11151Z Brassica rapa HOM05D003630 ORTHO05D004151 2.1e-52 208.8 109 90.8
Sp4g16220 Schrenkiella parvula HOM05D003630 ORTHO05D004151 2.1e-52 208.8 109 89.9
A05p11750 Brassica napus HOM05D003630 ORTHO05D004151 2.8e-52 208.4 109 93.6
BraA05t20119Z Brassica rapa HOM05D003630 ORTHO05D004151 2.8e-52 208.4 109 93.6
BolC3t14590H Brassica oleracea HOM05D003630 ORTHO05D004151 6.8e-51 203.8 109 90.8
CARHR127940 Cardamine hirsuta HOM05D003630 ORTHO05D004151 1.3e-46 189.5 107 84.1
Thhalv10017461m.g Eutrema salsugineum HOM05D003630 ORTHO05D004151 1.3e-46 189.5 109 83.5
Aa31sc652G110 Aethionema arabicum HOM05D003630 ORTHO05D004151 1.2e-44 183.0 110 80.0
Aa31sc652G20 Aethionema arabicum HOM05D003630 ORTHO05D004151 1.2e-44 183.0 110 80.0
C03p22060 Brassica napus HOM05D003630 ORTHO05D004151 2.8e-44 181.8 97 90.7
Gohir.A05G159800 Gossypium hirsutum HOM05D003630 ORTHO05D004151 3.8e-33 144.8 115 65.2
Gohir.D05G162500 Gossypium hirsutum HOM05D003630 ORTHO05D004151 1.1e-32 143.3 115 65.2
Carub.0001s2678 Capsella rubella HOM05D003630 ORTHO05D004151 2.1e-31 139.0 117 61.5
BcaC05g26841 Brassica carinata HOM05D003630 ORTHO05D004151 7.8e-31 137.1 114 56.1
Cc02_g13650 Coffea canephora HOM05D003630 ORTHO05D004151 1.3e-30 136.3 122 58.2
Aa31sc86G60 Aethionema arabicum HOM05D003630 ORTHO05D004151 1.7e-30 136.0 100 68.0
CiPaw.10G051200 Carya illinoinensis HOM05D003630 ORTHO05D004151 2.3e-30 135.6 118 61.0
BcaB07g32449 Brassica carinata HOM05D003630 ORTHO05D004151 3.9e-30 134.8 115 59.1
TAR626G1897 Trochodendron aralioides HOM05D003630 ORTHO05D004151 6.6e-30 134.0 116 60.3
AT5G44300 Arabidopsis thaliana HOM05D003630 ORTHO05D004151 1.9e-29 132.5 109 59.6
BraA02t07868Z Brassica rapa HOM05D003630 ORTHO05D004151 2.5e-29 132.1 109 59.6
Aa31LG9G8870 Aethionema arabicum HOM05D003630 ORTHO05D004151 3.3e-29 131.7 108 58.3
C02p44910 Brassica napus HOM05D003630 ORTHO05D004151 5.6e-29 131.0 109 58.7
BolC2t10526H Brassica oleracea HOM05D003630 ORTHO05D004151 5.6e-29 131.0 109 58.7
Thhalv10009086m.g Eutrema salsugineum HOM05D003630 ORTHO05D004151 5.6e-29 131.0 120 57.5
MBI02_g32444_MAGBIO Magnolia biondii HOM05D003630 ORTHO05D004151 5.6e-29 131.0 120 56.7
THA.LOC104814224 Tarenaya hassleriana HOM05D003630 ORTHO05D004151 5.6e-29 131.0 106 65.1
TAR624G0603 Trochodendron aralioides HOM05D003630 ORTHO05D004151 7.3e-29 130.6 110 60.9
AL8G15690 Arabidopsis lyrata HOM05D003630 ORTHO05D004151 9.6e-29 130.2 109 58.7
Prupe.4G050800 Prunus persica HOM05D003630 ORTHO05D004151 9.6e-29 130.2 114 63.2
A02p28330 Brassica napus HOM05D003630 ORTHO05D004151 1.6e-28 129.4 109 59.6
CiPaw.09G062300 Carya illinoinensis HOM05D003630 ORTHO05D004151 1.6e-28 129.4 113 58.4
Hma1.2p1_0208F.1_g088370 Hydrangea macrophylla HOM05D003630 ORTHO05D004151 1.6e-28 129.4 122 55.7
Sp2g09130 Schrenkiella parvula HOM05D003630 ORTHO05D004151 1.6e-28 129.4 109 57.8
Carub.0008s0422 Capsella rubella HOM05D003630 ORTHO05D004151 2.1e-28 129.0 108 56.5
PGSC0003DMG400029732 Solanum tuberosum HOM05D003630 ORTHO05D004151 2.1e-28 129.0 113 55.8
RcHm_v2.0_Chr5g0008921 Rosa chinensis HOM05D003630 ORTHO05D004151 2.8e-28 128.6 106 59.4
Thhalv10003427m.g Eutrema salsugineum HOM05D003630 ORTHO05D004151 4.8e-28 127.9 108 56.5
PGR004G0839 Punica granatum HOM05D003630 ORTHO05D004151 4.8e-28 127.9 119 54.6
Solyc02g077880.3 Solanum lycopersicum HOM05D003630 ORTHO05D004151 6.2e-28 127.5 113 56.6
Sopen02g022730 Solanum pennellii HOM05D003630 ORTHO05D004151 6.2e-28 127.5 113 56.6
Nitab4.5_0000516g0130 Nicotiana tabacum HOM05D003630 ORTHO05D004151 8.1e-28 127.1 121 52.9
Nitab4.5_0003487g0100 Nicotiana tabacum HOM05D003630 ORTHO05D004151 8.1e-28 127.1 120 55.0
ATR0752G193 Amborella trichopoda HOM05D003630 ORTHO05D004151 1.8e-27 125.9 118 55.9
Cpa.g.sc373.3 Carica papaya HOM05D003630 ORTHO05D004151 2.4e-27 125.6 116 56.0
Manes.17G047900 Manihot esculenta HOM05D003630 ORTHO05D004151 2.4e-27 125.6 113 57.5
vmacro15923 Vaccinium macrocarpon HOM05D003630 ORTHO05D004151 2.4e-27 125.6 122 57.4
Actinidia07592 Actinidia chinensis HOM05D003630 ORTHO05D004151 3.1e-27 125.2 121 55.4
MSTRG.15866 Avicennia marina HOM05D003630 ORTHO05D004151 5.3e-27 124.4 119 55.5
CDE11G0243 Ceratophyllum demersum HOM05D003630 ORTHO05D004151 5.3e-27 124.4 114 57.0
Nn1g04163 Nelumbo nucifera HOM05D003630 ORTHO05D004151 5.3e-27 124.4 116 55.2
AT1G28330 Arabidopsis thaliana HOM05D003630 ORTHO05D004151 9.0e-27 123.6 106 60.4
Migut.H01476 Erythranthe guttata HOM05D003630 ORTHO05D004151 9.0e-27 123.6 121 57.0
Gohir.A06G129700 Gossypium hirsutum HOM05D003630 ORTHO05D004151 1.2e-26 123.2 105 58.1
Gohir.D06G133900 Gossypium hirsutum HOM05D003630 ORTHO05D004151 1.2e-26 123.2 105 58.1
Os11g0671000 Oryza sativa ssp. japonica HOM05D003630 ORTHO05D004151 1.2e-26 123.2 123 51.2
GSVIVG01021092001 Vitis vinifera HOM05D003630 ORTHO05D004151 1.2e-26 123.2 114 53.5
HanXRQChr04g0123791 Helianthus annuus HOM05D003630 ORTHO05D004151 1.5e-26 122.9 114 56.1
PGR042G3375 Punica granatum HOM05D003630 ORTHO05D004151 1.5e-26 122.9 110 60.9
Dinv17335 Davidia involucrata HOM05D003630 ORTHO05D004151 2.0e-26 122.5 118 55.9
SalBow8G2511 Salvia bowleyana HOM05D003630 ORTHO05D004151 2.0e-26 122.5 114 56.1
TWI38G1513 Tripterygium wilfordii HOM05D003630 ORTHO05D004151 2.0e-26 122.5 115 56.5
Duzib160G0312 Durio zibethinus HOM05D003630 ORTHO05D004151 2.6e-26 122.1 110 58.2
ECA236G4733 Erigeron canadensis HOM05D003630 ORTHO05D004151 2.6e-26 122.1 117 57.3
PGSC0003DMG400012826 Solanum tuberosum HOM05D003630 ORTHO05D004151 3.4e-26 121.7 124 49.2
arahy.Tifrunner.gnm1.ann1.H8XLFU Arachis hypogaea HOM05D003630 ORTHO05D004151 4.5e-26 121.3 117 59.8
arahy.Tifrunner.gnm1.ann1.S1G93A Arachis hypogaea HOM05D003630 ORTHO05D004151 4.5e-26 121.3 117 59.8
unitig_749.g13657 Utricularia gibba HOM05D003630 ORTHO05D004151 4.5e-26 121.3 119 56.3
CARHR027820 Cardamine hirsuta HOM05D003630 ORTHO05D004151 5.8e-26 120.9 115 55.7
Gorai.009G167500 Gossypium raimondii HOM05D003630 ORTHO05D004151 7.6e-26 120.6 102 62.7
MSTRG.13203 Avicennia marina HOM05D003630 ORTHO05D004151 9.9e-26 120.2 115 53.0
ClCG01G023140 Citrullus lanatus HOM05D003630 ORTHO05D004151 9.9e-26 120.2 117 53.0
Solyc03g006360.3 Solanum lycopersicum HOM05D003630 ORTHO05D004151 9.9e-26 120.2 125 49.6
Peaxi162Scf01100g00009 Petunia axillaris HOM05D003630 ORTHO05D004151 1.3e-25 119.8 113 53.1
FAN16G2355 Fragaria x ananassa HOM05D003630 ORTHO05D004151 1.7e-25 119.4 106 55.7
FAN25G0655 Fragaria x ananassa HOM05D003630 ORTHO05D004151 1.7e-25 119.4 106 55.7
QL05p041782 Quercus lobata HOM05D003630 ORTHO05D004151 1.7e-25 119.4 115 53.9
AL1G41920 Arabidopsis lyrata HOM05D003630 ORTHO05D004151 2.2e-25 119.0 115 56.5
BolC5t31435H Brassica oleracea HOM05D003630 ORTHO05D004151 2.2e-25 119.0 112 50.9
Lj6g0013661 Lotus japonicus HOM05D003630 ORTHO05D004151 2.2e-25 119.0 114 59.6
Migut.M01120 Erythranthe guttata HOM05D003630 ORTHO05D004151 2.9e-25 118.6 120 52.5
Oeu012144.1 Olea europaea HOM05D003630 ORTHO05D004151 3.8e-25 118.2 119 53.8
Sp1g24570 Schrenkiella parvula HOM05D003630 ORTHO05D004151 4.9e-25 117.9 104 62.5
FvH4_3g08830 Fragaria vesca HOM05D003630 ORTHO05D004151 6.4e-25 117.5 109 55.0
FAN11G3953 Fragaria x ananassa HOM05D003630 ORTHO05D004151 6.4e-25 117.5 109 55.0
Oeu029367.1 Olea europaea HOM05D003630 ORTHO05D004151 6.4e-25 117.5 116 51.7
HPP92_018480 Vanilla planifolia HOM05D003630 ORTHO05D004151 6.4e-25 117.5 117 50.4
HPP92_018482 Vanilla planifolia HOM05D003630 ORTHO05D004151 6.4e-25 117.5 117 50.4
CDE05G2086 Ceratophyllum demersum HOM05D003630 ORTHO05D004151 8.4e-25 117.1 114 53.5
Oeu056100.2 Olea europaea HOM05D003630 ORTHO05D004151 8.4e-25 117.1 116 54.3
arahy.Tifrunner.gnm1.ann1.Q5B35H Arachis hypogaea HOM05D003630 ORTHO05D004151 1.1e-24 116.7 119 53.8
A09p37730 Brassica napus HOM05D003630 ORTHO05D004151 1.1e-24 116.7 113 54.0
C05p27220 Brassica napus HOM05D003630 ORTHO05D004151 1.1e-24 116.7 113 54.0
BraA09t39285Z Brassica rapa HOM05D003630 ORTHO05D004151 1.1e-24 116.7 113 54.0
FAN21G0750 Fragaria x ananassa HOM05D003630 ORTHO05D004151 1.1e-24 116.7 109 54.1
Lalb_Chr09g0327781 Lupinus albus HOM05D003630 ORTHO05D004151 1.1e-24 116.7 115 53.9
Sed0017838 Sechium edule HOM05D003630 ORTHO05D004151 1.1e-24 116.7 117 53.0
Ciclev10017162m.g Citrus clementina HOM05D003630 ORTHO05D004151 1.9e-24 115.9 106 54.7
Thecc.06G183500 Theobroma cacao HOM05D003630 ORTHO05D004151 1.9e-24 115.9 104 59.6
Atru.chr10.1820 Acer truncatum HOM05D003630 ORTHO05D004151 2.4e-24 115.5 104 53.8
Atru.chr10.1837 Acer truncatum HOM05D003630 ORTHO05D004151 2.4e-24 115.5 104 53.8
Lalb_Chr15g0089711 Lupinus albus HOM05D003630 ORTHO05D004151 2.4e-24 115.5 118 55.9
Aqoxy1G02347 Aquilegia oxysepala HOM05D003630 ORTHO05D004151 3.2e-24 115.2 113 53.1
Ah.09g237490 Amaranthus hybridus HOM05D003630 ORTHO05D004151 4.2e-24 114.8 117 49.6
THA.LOC104812301 Tarenaya hassleriana HOM05D003630 ORTHO05D004151 4.2e-24 114.8 111 54.1
Sed0024812 Sechium edule HOM05D003630 ORTHO05D004151 5.4e-24 114.4 108 51.9
CANSAT35G1140 Cannabis sativa HOM05D003630 ORTHO05D004151 9.3e-24 113.6 124 51.6
BcaC03g16649 Brassica carinata HOM05D003630 ORTHO05D004151 2.1e-23 112.5 97 56.7
Sed0001316 Sechium edule HOM05D003630 ORTHO05D004151 2.1e-23 112.5 107 53.3
CsaV3_6G050280 Cucumis sativus L. HOM05D003630 ORTHO05D004151 2.7e-23 112.1 117 49.6
CARHR178890 Cardamine hirsuta HOM05D003630 ORTHO05D004151 3.5e-23 111.7 113 52.2
CiPaw.04G030300 Carya illinoinensis HOM05D003630 ORTHO05D004151 3.5e-23 111.7 101 56.4
ClCG03G008090 Citrullus lanatus HOM05D003630 ORTHO05D004151 3.5e-23 111.7 108 51.9
COL.COLO4_31436 Corchorus olitorius HOM05D003630 ORTHO05D004151 4.6e-23 111.3 103 53.4
arahy.Tifrunner.gnm1.ann1.RY2Y1Z Arachis hypogaea HOM05D003630 ORTHO05D004151 7.9e-23 110.5 119 52.1
Phvul.006G183600 Phaseolus vulgaris HOM05D003630 ORTHO05D004151 7.9e-23 110.5 117 53.8
Duzib235G1039 Durio zibethinus HOM05D003630 ORTHO05D004151 1.3e-22 109.8 117 51.3
SGA_v2.0_scaffold100G29703 Striga asiatica HOM05D003630 ORTHO05D004151 1.8e-22 109.4 114 53.5
VMungo0540G1118 Vigna mungo HOM05D003630 ORTHO05D004151 1.8e-22 109.4 116 52.6
Lsat_1_v5_gn_1_124360 Lactuca sativa HOM05D003630 ORTHO05D004151 2.3e-22 109.0 98 56.1
Manes.16G030000 Manihot esculenta HOM05D003630 ORTHO05D004151 2.3e-22 109.0 103 55.3
Lalb_Chr18g0059451 Lupinus albus HOM05D003630 ORTHO05D004151 3.0e-22 108.6 119 55.5
Ca_00350_v3 Cicer arietinum L. HOM05D003630 ORTHO05D004151 3.9e-22 108.2 114 51.8
Lsat_1_v5_gn_7_20981 Lactuca sativa HOM05D003630 ORTHO05D004151 3.9e-22 108.2 104 55.8
Rhsim02G0132700 Rhododendron simsii HOM05D003630 ORTHO05D004151 3.9e-22 108.2 113 53.1
AUR62017046 Chenopodium quinoa HOM05D003630 ORTHO05D004151 5.1e-22 107.8 118 49.2
Glyma.13G237000 Glycine max HOM05D003630 ORTHO05D004151 5.1e-22 107.8 113 53.1
TPR.G16501 Trifolium pratense HOM05D003630 ORTHO05D004151 6.7e-22 107.5 117 53.0
HPP92_014190 Vanilla planifolia HOM05D003630 ORTHO05D004151 6.7e-22 107.5 111 49.5
CSS0035295 Camellia sinensis var. sinensis HOM05D003630 ORTHO05D004151 1.1e-21 106.7 121 51.2
MELO3C002620.2 Cucumis melo HOM05D003630 ORTHO05D004151 1.1e-21 106.7 107 53.3
Gorai.010G155600 Gossypium raimondii HOM05D003630 ORTHO05D004151 1.1e-21 106.7 95 55.8
Medtr2g014240 Medicago truncatula HOM05D003630 ORTHO05D004151 1.5e-21 106.3 113 54.0
Sopen03g002370 Solanum pennellii HOM05D003630 ORTHO05D004151 1.9e-21 105.9 120 47.5
CAN.G529.26 Capsicum annuum HOM05D003630 ORTHO05D004151 2.5e-21 105.5 71 67.6
Dinv40586 Davidia involucrata HOM05D003630 ORTHO05D004151 2.5e-21 105.5 106 52.8
HanXRQChr01g0003821 Helianthus annuus HOM05D003630 ORTHO05D004151 2.5e-21 105.5 113 52.2
CsaV3_1G012460 Cucumis sativus L. HOM05D003630 ORTHO05D004151 3.3e-21 105.1 107 52.3
CSS0033873 Camellia sinensis var. sinensis HOM05D003630 ORTHO05D004151 5.6e-21 104.4 103 55.3
DCAR_003387 Daucus carota HOM05D003630 ORTHO05D004151 5.6e-21 104.4 116 47.4
PSO541G4117 Papaver somniferum HOM05D003630 ORTHO05D004151 5.6e-21 104.4 123 50.4
Glyma.15G076500 Glycine max HOM05D003630 ORTHO05D004151 9.6e-21 103.6 113 49.6
AUR62014851 Chenopodium quinoa HOM05D003630 ORTHO05D004151 1.6e-20 102.8 118 48.3
CSS0037340 Camellia sinensis var. sinensis HOM05D003630 ORTHO05D004151 2.8e-20 102.1 106 52.8
TWI38G1867 Tripterygium wilfordii HOM05D003630 ORTHO05D004151 4.8e-20 101.3 104 52.9
Potri.004G047100 Populus trichocarpa HOM05D003630 ORTHO05D004151 1.1e-19 100.1 108 51.9
Sc24g0001020 Simmondsia chinensis HOM05D003630 ORTHO05D004151 2.4e-19 99.0 104 49.0
MELO3C007269.2 Cucumis melo HOM05D003630 ORTHO05D004151 4.0e-19 98.2 105 48.6
BcaB07g30534 Brassica carinata HOM05D003630 ORTHO05D004151 6.9e-19 97.4 93 53.8
PSO675G3190 Papaver somniferum HOM05D003630 ORTHO05D004151 1.5e-18 96.3 120 45.8
EL10Ac8g20421 Beta vulgaris HOM05D003630 ORTHO05D004151 2.0e-18 95.9 121 43.8
Cfa000510 Carpinus fangiana HOM05D003630 ORTHO05D004151 4.5e-18 94.7 106 51.9
Haze_06402 Corylus avellana HOM05D003630 ORTHO05D004151 9.9e-18 93.6 108 50.9
SEGI_31386 Sequoiadendron giganteum HOM05D003630 ORTHO05D004151 3.8e-17 91.7 132 39.4
Aa31LG9G7730 Aethionema arabicum HOM05D003630 ORTHO05D004151 6.4e-17 90.9 86 55.8
DCAR_008021 Daucus carota HOM05D003630 ORTHO05D004151 6.4e-17 90.9 121 42.1
Psat1g203680 Pisum sativum HOM05D003630 ORTHO05D004151 1.9e-16 89.4 105 48.6
Sabra04G0029500 Salix brachista HOM05D003630 ORTHO05D004151 7.1e-16 87.4 108 47.2
MD14G1054500 Malus domestica HOM05D003630 ORTHO05D004151 2.3e-14 82.4 89 49.4
Sed0007569 Sechium edule HOM05D003630 ORTHO05D004151 3.0e-14 82.0 95 47.4
SMO343G0126 Selaginella moellendorffii HOM05D003630 ORTHO05D004151 3.0e-14 82.0 152 33.6
Pp3c15_6160 Physcomitrium patens HOM05D003630 ORTHO05D004151 5.1e-14 81.3 145 34.5
ECA248G1596 Erigeron canadensis HOM05D000885 ORTHO05D008875 2.5e-13 79.0 77 54.5
Sc17g0006070 Simmondsia chinensis HOM05D003630 ORTHO05D004151 3.3e-13 78.6 105 39.0
Mapoly0057s0054 Marchantia polymorpha HOM05D003630 ORTHO05D004151 7.4e-13 77.4 137 35.8
SMO367G0919 Selaginella moellendorffii HOM05D003630 ORTHO05D004151 1.3e-12 76.6 112 39.3
AagrBONN_evm.TU.Sc2ySwM_228.5600 Anthoceros agrestis HOM05D003630 ORTHO05D004151 3.4e-10 68.6 145 33.8
AagrBONN_evm.TU.Sc2ySwM_362.1976 Anthoceros agrestis HOM05D003630 ORTHO05D004151 1.3e-06 56.6 55 52.7
COL.COLO4_29750 Corchorus olitorius HOM05D003630 ORTHO05D004151 6.7e-06 54.3 39 66.7


User provided reference genes

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