Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT2G33010 Arabidopsis thaliana HOM05D009362 ORTHO05D031387 0.0e+00 1288.5 650 100.0
AL4G28580 Arabidopsis lyrata HOM05D009362 ORTHO05D031387 6.8e-194 681.4 681 59.5
Carub.0004s1449 Capsella rubella HOM05D009362 ORTHO05D031387 1.3e-72 278.5 641 36.5
Thhalv10017579m.g Eutrema salsugineum HOM05D009362 ORTHO05D012051 3.7e-51 207.2 656 31.4
Sp4g15370 Schrenkiella parvula HOM05D009362 ORTHO05D012051 6.0e-49 199.9 686 31.5
AT2G33000 Arabidopsis thaliana HOM05D009362 ORTHO05D012051 5.4e-42 176.8 668 31.4
Carub.0004s1445 Capsella rubella HOM05D009362 ORTHO05D012051 5.6e-39 166.8 668 29.0
Thhalv10017728m.g Eutrema salsugineum HOM05D014511 ORTHO05D016011 3.8e-27 127.5 342 32.5
A05p12600 Brassica napus HOM05D009362 ORTHO05D012051 4.9e-27 127.1 393 30.8
AL120U10012 Arabidopsis lyrata HOM05D009362 ORTHO05D012051 9.3e-26 122.9 293 38.6
BcaB02g10519 Brassica carinata HOM05D009362 ORTHO05D012051 1.6e-25 122.1 393 32.3
AL4G28550 Arabidopsis lyrata HOM05D009362 ORTHO05D012051 1.1e-23 115.9 186 48.4
BolC4t23197H Brassica oleracea HOM05D009362 ORTHO05D012051 6.2e-22 110.2 422 30.6
BcaB02g10516 Brassica carinata HOM05D014511 ORTHO05D016011 8.1e-22 109.8 658 25.2
BcaB02g10518 Brassica carinata HOM05D009362 ORTHO05D016011 8.1e-22 109.8 700 25.9
A05p12590 Brassica napus HOM05D009362 ORTHO05D012051 2.4e-21 108.2 696 25.6
BcaC02g11372 Brassica carinata HOM05D009362 ORTHO05D012051 6.9e-21 106.7 320 32.8
BcaC02g11371 Brassica carinata HOM05D009362 ORTHO05D012051 3.4e-20 104.4 228 39.9
C04p16480 Brassica napus HOM05D009362 ORTHO05D012051 3.4e-20 104.4 228 39.9
BraA05t20199Z Brassica rapa HOM05D009362 ORTHO05D012051 1.0e-19 102.8 176 43.2
BraA05t20200Z Brassica rapa HOM05D014511 ORTHO05D016011 1.8e-16 92.0 669 23.8
BolC4t23196H Brassica oleracea HOM05D009362 ORTHO05D012051 3.9e-16 90.9 232 34.5
BcaC02g11375 Brassica carinata HOM05D009362 ORTHO05D012051 2.5e-15 88.2 219 36.1
C04p16460 Brassica napus HOM05D009362 ORTHO05D012051 2.5e-15 88.2 219 36.1
BraA05t20196Z Brassica rapa HOM05D009362 ORTHO05D012051 2.5e-15 88.2 235 34.0
A05p12620 Brassica napus HOM05D014511 ORTHO05D016011 6.3e-14 83.6 679 23.9
BolC4t23199H Brassica oleracea HOM05D014511 ORTHO05D016011 1.4e-13 82.4 687 23.3
AL2G10730 Arabidopsis lyrata HOM05D009362 ORTHO05D079465 1.8e-13 82.0 72 66.7
BraA05t20197Z Brassica rapa HOM05D009362 ORTHO05D012051 1.8e-13 82.0 365 27.4
C04p16510 Brassica napus HOM05D014511 ORTHO05D016011 4.5e-12 77.4 694 22.9
BcaNung00813 Brassica carinata HOM05D009362 ORTHO05D012051 1.0e-11 76.3 143 44.1
C02p58020 Brassica napus HOM05D009362 ORTHO05D012051 1.3e-11 75.9 143 44.1
BolC5t33668H Brassica oleracea HOM05D009362 ORTHO05D012051 1.3e-11 75.9 153 42.5
BcaC02g11367 Brassica carinata HOM05D014511 ORTHO05D016011 1.1e-07 62.8 154 30.5
C04p16500 Brassica napus HOM05D014511 ORTHO05D016011 5.7e-07 60.5 155 38.1
BcaC02g11369 Brassica carinata HOM05D014511 ORTHO05D016011 2.2e-06 58.5 81 44.4


User provided reference genes

Program Settings