Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT2G33000 Arabidopsis thaliana HOM05D009362 ORTHO05D012051 5.5e-292 1006.9 509 100.0
AL4G28550 Arabidopsis lyrata HOM05D009362 ORTHO05D012051 9.4e-167 590.9 559 60.5
Carub.0004s1445 Capsella rubella HOM05D009362 ORTHO05D012051 3.0e-149 532.7 500 62.0
AL120U10012 Arabidopsis lyrata HOM05D009362 ORTHO05D012051 2.7e-121 439.9 371 66.6
Sp4g15370 Schrenkiella parvula HOM05D009362 ORTHO05D012051 8.4e-107 391.7 582 45.0
Thhalv10017579m.g Eutrema salsugineum HOM05D009362 ORTHO05D012051 3.1e-93 346.7 510 46.3
AL4G28580 Arabidopsis lyrata HOM05D009362 ORTHO05D031387 1.8e-53 214.5 612 34.6
BcaB02g10519 Brassica carinata HOM05D009362 ORTHO05D012051 2.4e-53 214.2 487 35.9
A05p12600 Brassica napus HOM05D009362 ORTHO05D012051 1.7e-51 208.0 494 35.0
BolC4t23197H Brassica oleracea HOM05D009362 ORTHO05D012051 2.1e-49 201.1 500 34.0
BcaC02g11371 Brassica carinata HOM05D009362 ORTHO05D012051 4.7e-49 199.9 495 33.1
C04p16480 Brassica napus HOM05D009362 ORTHO05D012051 4.7e-49 199.9 495 33.1
BolC4t23196H Brassica oleracea HOM05D009362 ORTHO05D012051 7.0e-45 186.0 497 33.4
Thhalv10017728m.g Eutrema salsugineum HOM05D014511 ORTHO05D016011 7.0e-45 186.0 328 41.2
AT2G33010 Arabidopsis thaliana HOM05D009362 ORTHO05D031387 3.6e-41 173.7 668 31.4
BcaC02g11375 Brassica carinata HOM05D009362 ORTHO05D012051 1.4e-40 171.8 493 31.0
C04p16460 Brassica napus HOM05D009362 ORTHO05D012051 1.4e-40 171.8 493 31.0
BraA05t20196Z Brassica rapa HOM05D009362 ORTHO05D012051 2.8e-38 164.1 491 31.6
BraA05t20200Z Brassica rapa HOM05D014511 ORTHO05D016011 8.3e-38 162.5 606 29.4
A05p12590 Brassica napus HOM05D009362 ORTHO05D012051 3.2e-37 160.6 631 27.4
Carub.0004s1449 Capsella rubella HOM05D009362 ORTHO05D031387 3.5e-36 157.1 531 29.0
BcaC02g11372 Brassica carinata HOM05D009362 ORTHO05D012051 4.5e-36 156.8 289 39.4
BcaB02g10516 Brassica carinata HOM05D014511 ORTHO05D016011 1.3e-35 155.2 590 30.2
A05p12620 Brassica napus HOM05D014511 ORTHO05D016011 4.7e-33 146.7 615 28.6
BcaB02g10518 Brassica carinata HOM05D009362 ORTHO05D016011 5.2e-32 143.3 616 27.9
C04p16510 Brassica napus HOM05D014511 ORTHO05D016011 1.2e-31 142.1 605 28.8
BraA05t20199Z Brassica rapa HOM05D009362 ORTHO05D012051 2.6e-31 141.0 174 50.6
BraA05t20197Z Brassica rapa HOM05D009362 ORTHO05D012051 7.5e-31 139.4 493 29.6
BolC4t23199H Brassica oleracea HOM05D014511 ORTHO05D016011 1.4e-29 135.2 616 27.3
BcaC02g11367 Brassica carinata HOM05D014511 ORTHO05D016011 2.2e-22 111.3 194 39.2
BcaNung00813 Brassica carinata HOM05D009362 ORTHO05D012051 4.3e-18 97.1 143 49.0
BcaC02g11368 Brassica carinata HOM05D014511 ORTHO05D016011 1.2e-17 95.5 576 25.0
C02p58020 Brassica napus HOM05D009362 ORTHO05D012051 8.1e-17 92.8 143 48.3
BolC5t33668H Brassica oleracea HOM05D009362 ORTHO05D012051 1.1e-13 82.4 141 45.4
BcaC03g16119 Brassica carinata HOM05D009362 ORTHO05D012051 6.0e-12 76.6 140 42.1
A03p38600 Brassica napus HOM05D003244 ORTHO05D003645 6.2e-09 66.6 274 28.5
BolC2t11870H Brassica oleracea HOM05D009362 ORTHO05D012051 8.1e-09 66.2 114 46.5
BcaC03g15844 Brassica carinata HOM05D009362 ORTHO05D012051 1.4e-08 65.5 158 38.0
C04p16500 Brassica napus HOM05D014511 ORTHO05D016011 5.2e-08 63.5 116 40.5
BcaC02g11369 Brassica carinata HOM05D014511 ORTHO05D016011 6.4e-06 56.6 70 50.0


User provided reference genes

Program Settings