Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT2G32890 Arabidopsis thaliana HOM05D010530 ORTHO05D012608 8.5e-35 149.8 78 100.0
AL4G28400 Arabidopsis lyrata HOM05D010530 ORTHO05D012608 5.7e-31 137.1 78 91.0
Carub.0004s1430 Capsella rubella HOM05D010530 ORTHO05D012608 2.0e-28 128.6 79 89.9
CARHR126830 Cardamine hirsuta HOM05D010530 ORTHO05D012608 2.9e-27 124.8 78 82.1
C04p62410 Brassica napus HOM05D010530 ORTHO05D012608 6.5e-27 123.6 78 80.8
A04p25330 Brassica napus HOM05D010530 ORTHO05D012608 1.1e-26 122.9 78 80.8
BraA04t18036Z Brassica rapa HOM05D010530 ORTHO05D012608 1.1e-26 122.9 78 80.8
Sp4g15260 Schrenkiella parvula HOM05D010530 ORTHO05D012608 1.1e-26 122.9 78 85.9
BcaC02g07879 Brassica carinata HOM05D010530 ORTHO05D012608 1.5e-26 122.5 78 79.5
BolC4t27716H Brassica oleracea HOM05D010530 ORTHO05D012608 1.5e-26 122.5 78 79.5
BcaB06g28640 Brassica carinata HOM05D010530 ORTHO05D012608 3.2e-26 121.3 78 76.9
BcaB01g03943 Brassica carinata HOM05D010530 ORTHO05D012608 1.4e-24 115.9 78 82.1
A03p18540 Brassica napus HOM05D010530 ORTHO05D012608 1.4e-24 115.9 78 83.3
BraA03t11113Z Brassica rapa HOM05D010530 ORTHO05D012608 1.4e-24 115.9 78 83.3
BraA05t20214Z Brassica rapa HOM05D010530 ORTHO05D012608 8.8e-24 113.2 78 78.2
Thhalv10017623m.g Eutrema salsugineum HOM05D010530 ORTHO05D012608 2.8e-22 108.2 81 77.8
C04p16660 Brassica napus HOM05D010530 ORTHO05D012608 2.7e-20 101.7 68 80.9
BolC4t23216H Brassica oleracea HOM05D010530 ORTHO05D012608 2.7e-20 101.7 68 80.9
BcaC01g05866 Brassica carinata HOM05D010530 ORTHO05D012608 6.6e-19 97.1 79 73.4
C03p21600 Brassica napus HOM05D010530 ORTHO05D012608 6.6e-19 97.1 79 73.4
BolC3t14544H Brassica oleracea HOM05D010530 ORTHO05D012608 6.6e-19 97.1 79 73.4
Cpa.g.sc132.42 Carica papaya HOM05D021260 ORTHO05D022237 4.7e-09 64.3 77 41.6


User provided reference genes

Program Settings