Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT2G31440 Arabidopsis thaliana HOM05D006537 ORTHO05D008186 1.4e-134 483.0 251 100.0
AL4G26710 Arabidopsis lyrata HOM05D006537 ORTHO05D008186 8.9e-134 480.3 251 98.8
Carub.0004s1277 Capsella rubella HOM05D006537 ORTHO05D008186 6.3e-132 474.2 249 97.6
BcaC01g05952 Brassica carinata HOM05D006537 ORTHO05D008186 1.2e-127 459.9 249 93.2
C03p20710 Brassica napus HOM05D006537 ORTHO05D008186 1.2e-127 459.9 249 93.2
BolC3t14452H Brassica oleracea HOM05D006537 ORTHO05D008186 1.2e-127 459.9 249 93.2
Thhalv10017140m.g Eutrema salsugineum HOM05D006537 ORTHO05D008186 1.6e-127 459.5 251 95.2
BraA03t11027Z Brassica rapa HOM05D006537 ORTHO05D008186 2.8e-127 458.8 246 93.9
Sp4g13920 Schrenkiella parvula HOM05D006537 ORTHO05D008186 6.1e-127 457.6 246 93.9
A03p17600 Brassica napus HOM05D006537 ORTHO05D008186 8.0e-127 457.2 246 93.5
CARHR125090 Cardamine hirsuta HOM05D006537 ORTHO05D008186 6.8e-126 454.1 246 94.7
BcaB01g04045 Brassica carinata HOM05D006537 ORTHO05D008186 1.7e-124 449.5 246 93.5
TWI63G0033 Tripterygium wilfordii HOM05D006537 ORTHO05D008186 3.2e-115 418.7 249 81.9
Aa31LG5G5440 Aethionema arabicum HOM05D006537 ORTHO05D008186 7.8e-114 414.1 250 86.8
MD04G1039500 Malus domestica HOM05D006537 ORTHO05D008186 2.3e-113 412.5 248 79.4
Prupe.1G190300 Prunus persica HOM05D006537 ORTHO05D008186 4.3e-112 408.3 248 78.2
GSVIVG01010746001 Vitis vinifera HOM05D006537 ORTHO05D008186 1.6e-111 406.4 249 78.3
Dinv22722 Davidia involucrata HOM05D006537 ORTHO05D008186 4.7e-111 404.8 249 77.9
Duzib212G0958 Durio zibethinus HOM05D006537 ORTHO05D008186 4.7e-111 404.8 248 77.4
CiPaw.01G101300 Carya illinoinensis HOM05D006537 ORTHO05D008186 6.2e-111 404.4 245 80.4
Haze_01534 Corylus avellana HOM05D006537 ORTHO05D008186 6.2e-111 404.4 251 77.3
Ciclev10021930m.g Citrus clementina HOM05D006537 ORTHO05D008186 8.1e-111 404.1 242 81.8
FvH4_4g11160 Fragaria vesca HOM05D006537 ORTHO05D008186 1.4e-110 403.3 245 80.4
Thecc.04G185300 Theobroma cacao HOM05D006537 ORTHO05D008186 1.8e-110 402.9 248 77.0
Gohir.A02G015200 Gossypium hirsutum HOM05D006537 ORTHO05D008186 2.3e-110 402.5 245 77.6
Potri.007G127400 Populus trichocarpa HOM05D006537 ORTHO05D008186 5.2e-110 401.4 243 79.8
Atru.chr3.1537 Acer truncatum HOM05D006537 ORTHO05D008186 1.2e-109 400.2 245 79.6
QL10p048350 Quercus lobata HOM05D006537 ORTHO05D008186 1.2e-109 400.2 249 76.3
CSS0005792 Camellia sinensis var. sinensis HOM05D006537 ORTHO05D008186 1.5e-109 399.8 245 78.0
Gohir.D02G016700 Gossypium hirsutum HOM05D006537 ORTHO05D008186 1.5e-109 399.8 245 77.1
Duzib268G1074 Durio zibethinus HOM05D006537 ORTHO05D008186 2.6e-109 399.1 248 77.0
Solyc06g073410.3 Solanum lycopersicum HOM05D006537 ORTHO05D008186 4.4e-109 398.3 245 78.0
Sopen06g029790 Solanum pennellii HOM05D006537 ORTHO05D008186 4.4e-109 398.3 245 78.0
Gorai.005G020200 Gossypium raimondii HOM05D006537 ORTHO05D008186 1.7e-108 396.4 245 76.3
Nitab4.5_0004579g0020 Nicotiana tabacum HOM05D006537 ORTHO05D008186 3.7e-108 395.2 245 76.7
PGSC0003DMG400027008 Solanum tuberosum HOM05D006537 ORTHO05D008186 4.9e-108 394.8 245 76.7
Eucgr.A00074 Eucalyptus grandis HOM05D006537 ORTHO05D008186 1.4e-107 393.3 242 77.3
AUR62015408 Chenopodium quinoa HOM05D006537 ORTHO05D008186 3.2e-107 392.1 245 77.1
TAR633G2589 Trochodendron aralioides HOM05D006537 ORTHO05D008186 3.2e-107 392.1 246 77.2
ClCG08G004470 Citrullus lanatus HOM05D006537 ORTHO05D008186 4.1e-107 391.7 245 76.3
Eucgr.A00271 Eucalyptus grandis HOM05D006537 ORTHO05D008186 4.1e-107 391.7 242 77.3
MELO3C011641.2 Cucumis melo HOM05D006537 ORTHO05D008186 5.4e-107 391.3 245 76.7
Cc00_g09850 Coffea canephora HOM05D006537 ORTHO05D008186 1.6e-106 389.8 249 75.5
THA.LOC104826193 Tarenaya hassleriana HOM05D006537 ORTHO05D008186 1.6e-106 389.8 251 80.1
Ca_20779_v3 Cicer arietinum L. HOM05D006537 ORTHO05D008186 2.7e-106 389.0 242 75.6
CsaV3_6G003840 Cucumis sativus L. HOM05D006537 ORTHO05D008186 6.0e-106 387.9 244 76.6
Peaxi162Scf00375g00618 Petunia axillaris HOM05D006537 ORTHO05D008186 6.0e-106 387.9 245 75.1
CANSAT78G1337 Cannabis sativa HOM05D006537 ORTHO05D008186 1.0e-105 387.1 245 77.1
PSO732G0008 Papaver somniferum HOM05D006537 ORTHO05D008186 1.3e-105 386.7 249 75.9
Lj3g0010197 Lotus japonicus HOM05D006537 ORTHO05D008186 2.3e-105 386.0 249 73.1
arahy.Tifrunner.gnm1.ann1.RQ8JR0 Arachis hypogaea HOM05D006537 ORTHO05D008186 5.1e-105 384.8 240 76.2
arahy.Tifrunner.gnm1.ann1.W0CVEC Arachis hypogaea HOM05D006537 ORTHO05D008186 5.1e-105 384.8 240 76.2
Psat7g214000 Pisum sativum HOM05D006537 ORTHO05D008186 1.1e-104 383.6 242 74.4
Aqoxy2G04100 Aquilegia oxysepala HOM05D006537 ORTHO05D008186 1.5e-104 383.3 249 73.9
Sed0000584 Sechium edule HOM05D006537 ORTHO05D008186 2.5e-104 382.5 252 74.6
PSO675G9308 Papaver somniferum HOM05D006537 ORTHO05D008186 5.6e-104 381.3 249 74.3
TPR.G34202 Trifolium pratense HOM05D006537 ORTHO05D008186 5.6e-104 381.3 242 74.0
Phvul.011G055200 Phaseolus vulgaris HOM05D006537 ORTHO05D008186 7.3e-104 380.9 242 75.6
Actinidia35970 Actinidia chinensis HOM05D006537 ORTHO05D008186 9.6e-104 380.6 245 74.7
Rhsim09G0028500 Rhododendron simsii HOM05D006537 ORTHO05D008186 9.6e-104 380.6 257 72.0
VMungo1127G2200 Vigna mungo HOM05D006537 ORTHO05D008186 1.2e-103 380.2 242 75.6
Glyma.12G053200 Glycine max HOM05D006537 ORTHO05D008186 3.6e-103 378.6 242 74.8
EL10Ac3g05587 Beta vulgaris HOM05D006537 ORTHO05D008186 6.2e-103 377.9 264 72.3
Medtr4g067050 Medicago truncatula HOM05D006537 ORTHO05D008186 8.1e-103 377.5 249 72.3
Oeu011639.1 Olea europaea HOM05D006537 ORTHO05D008186 1.1e-102 377.1 249 73.1
HanXRQChr14g0433111 Helianthus annuus HOM05D006537 ORTHO05D008186 1.4e-102 376.7 243 73.3
Glyma.11G128700 Glycine max HOM05D006537 ORTHO05D008186 1.8e-102 376.3 242 75.2
RcHm_v2.0_Chr4g0407291 Rosa chinensis HOM05D006537 ORTHO05D008186 6.8e-102 374.4 245 75.9
Actinidia34608 Actinidia chinensis HOM05D006537 ORTHO05D008186 5.8e-101 371.3 245 73.9
Lalb_Chr01g0003221 Lupinus albus HOM05D006537 ORTHO05D008186 7.6e-101 370.9 249 72.7
SGA_v2.0_scaffold74G24571 Striga asiatica HOM05D006537 ORTHO05D008186 1.7e-100 369.8 245 71.0
unitig_747.g21541 Utricularia gibba HOM05D006537 ORTHO05D008186 2.4e-99 365.9 239 71.5
A10p04320 Brassica napus HOM05D006537 ORTHO05D008186 6.0e-98 361.3 195 90.3
CDE04G1858 Ceratophyllum demersum HOM05D006537 ORTHO05D008186 6.0e-98 361.3 244 69.7
Migut.C00288 Erythranthe guttata HOM05D006537 ORTHO05D008186 1.0e-97 360.5 245 71.4
ECA238G3138 Erigeron canadensis HOM05D000961 ORTHO05D000001 1.7e-97 359.8 234 73.9
Lsat_1_v5_gn_2_34721 Lactuca sativa HOM05D006537 ORTHO05D008186 2.1e-95 352.8 243 70.0
Nn1g09574 Nelumbo nucifera HOM05D006537 ORTHO05D008186 2.1e-95 352.8 245 71.8
Manes.04G042325 Manihot esculenta HOM05D006537 ORTHO05D008186 6.9e-94 347.8 203 83.7
CAN.G65.183 Capsicum annuum HOM05D006537 ORTHO05D008186 1.2e-93 347.1 245 69.8
COL.COLO4_24411 Corchorus olitorius HOM05D006537 ORTHO05D008186 6.4e-92 341.3 203 80.8
Zm00001eb237480 Zea mays HOM05D006537 ORTHO05D008186 2.4e-91 339.3 249 65.9
Nitab4.5_0003132g0110 Nicotiana tabacum HOM05D006537 ORTHO05D008186 3.2e-91 339.0 217 76.0
HPP92_005584 Vanilla planifolia HOM05D006537 ORTHO05D008186 3.2e-91 339.0 242 67.8
HPP92_005589 Vanilla planifolia HOM05D006537 ORTHO05D008186 4.2e-91 338.6 242 67.8
SEGI_14947 Sequoiadendron giganteum HOM05D006537 ORTHO05D008186 2.7e-90 335.9 239 67.8
Sabra07G0103400 Salix brachista HOM05D006537 ORTHO05D008186 3.0e-89 332.4 213 77.0
vmacro22675 Vaccinium macrocarpon HOM05D006537 ORTHO05D008186 3.0e-89 332.4 203 76.8
ATR0686G132 Amborella trichopoda HOM05D006537 ORTHO05D008186 3.9e-89 332.0 245 66.9
Sc25g0002980 Simmondsia chinensis HOM05D006537 ORTHO05D008186 1.5e-88 330.1 245 66.9
Os02g0272600 Oryza sativa ssp. japonica HOM05D006537 ORTHO05D008186 1.3e-87 327.0 249 63.5
Dinv44198 Davidia involucrata HOM05D006537 ORTHO05D008186 3.4e-85 318.9 184 84.2
AUR62002287 Chenopodium quinoa HOM05D006537 ORTHO05D008186 1.3e-84 317.0 198 73.2
Cpa.g.sc409.1 Carica papaya HOM05D006537 ORTHO05D008186 7.1e-83 311.2 202 76.2
PGR083G1737 Punica granatum HOM05D006537 ORTHO05D008186 2.7e-82 309.3 251 62.9
BraA10t42709Z Brassica rapa HOM05D006537 ORTHO05D008186 6.0e-74 281.6 157 90.4
Hund03149 Selenicereus undatus HOM05D006537 ORTHO05D008186 6.0e-74 281.6 259 61.0
Lj6A56G22 Lonicera japonica HOM05D006537 ORTHO05D008186 1.3e-73 280.4 249 59.0
MSTRG.24999 Avicennia marina HOM05D006537 ORTHO05D008186 1.8e-73 280.0 247 59.1
AagrBONN_evm.TU.Sc2ySwM_344.2170 Anthoceros agrestis HOM05D006537 ORTHO05D008186 1.8e-70 270.0 238 55.0
Mapoly0042s0024 Marchantia polymorpha HOM05D006537 ORTHO05D008186 1.3e-65 253.8 249 51.0
SMO174G0097 Selaginella moellendorffii HOM05D006537 ORTHO05D008186 1.6e-63 246.9 238 53.8
Pp3c14_4280 Physcomitrium patens HOM05D006537 ORTHO05D008186 1.5e-61 240.4 244 49.6
FAN07G2858 Fragaria x ananassa HOM05D006537 ORTHO05D008186 2.2e-60 236.5 202 64.4
Pp3c10_5780 Physcomitrium patens HOM05D006537 ORTHO05D008186 4.2e-59 232.3 237 47.7
SHI21233 Sapria himalayana HOM05D006537 ORTHO05D008186 1.0e-49 201.1 159 61.0
PSO675G6606 Papaver somniferum HOM05D006537 ORTHO05D008186 1.4e-49 200.7 152 63.8
PSO675G1145 Papaver somniferum HOM05D006537 ORTHO05D008186 2.3e-49 199.9 159 62.9
PSO229G0026 Papaver somniferum HOM05D006537 ORTHO05D008186 1.1e-48 197.6 152 63.2
PSO832G3398 Papaver somniferum HOM05D006537 ORTHO05D008186 4.8e-47 192.2 119 77.3
SalBow7G4202 Salvia bowleyana HOM05D006537 ORTHO05D008186 2.4e-46 189.9 116 73.3
PSO017G0422 Papaver somniferum HOM05D006537 ORTHO05D008186 3.1e-46 189.5 120 77.5
A10p04420 Brassica napus HOM05D006537 ORTHO05D008186 1.0e-41 174.5 94 92.6
DCAR_022903 Daucus carota HOM05D006537 ORTHO05D008186 7.7e-37 158.3 119 64.7
BraA10t42699Z Brassica rapa HOM05D006537 ORTHO05D008186 1.3e-36 157.5 95 85.3
Cre13.g576300 Chlamydomonas reinhardtii HOM05D006537 ORTHO05D008186 3.2e-35 152.9 231 39.0
Lj6P622T45 Lonicera japonica HOM05D006537 ORTHO05D008186 6.3e-31 138.7 91 70.3
CBR_g29804 Chara braunii HOM05D006537 ORTHO05D008186 1.5e-16 90.9 71 59.2
vmacro00700 Vaccinium macrocarpon HOM05D006537 ORTHO05D008186 5.7e-16 89.0 166 38.0
Cpa.g.c46401 Carica papaya HOM05D006537 ORTHO05D008186 1.7e-07 60.8 42 57.1
Sopen06g005930 Solanum pennellii HOM05D006537 ORTHO05D008186 2.9e-07 60.1 38 81.6


User provided reference genes

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