Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT2G31425 Arabidopsis thaliana HOM05D008191 ORTHO05D010044 3.3e-101 371.7 186 100.0
AL4G26680 Arabidopsis lyrata HOM05D008191 ORTHO05D010044 4.6e-79 298.1 161 88.2
CARHR125060 Cardamine hirsuta HOM05D008191 ORTHO05D010044 3.8e-57 225.3 169 63.3
AT2G31432 Arabidopsis thaliana HOM05D008191 ORTHO05D010044 1.6e-42 176.8 188 51.6
Carub.0004s1275 Capsella rubella HOM05D008191 ORTHO05D010044 1.6e-42 176.8 169 55.0
AL6G44660 Arabidopsis lyrata HOM05D008191 ORTHO05D010044 2.5e-40 169.5 157 53.5
Sp4g10300 Schrenkiella parvula HOM05D008191 ORTHO05D010044 1.4e-38 163.7 185 48.1
Carub.0006s2939 Capsella rubella HOM05D008191 ORTHO05D010044 2.6e-37 159.5 186 48.4
AT2G31430 Arabidopsis thaliana HOM05D008191 ORTHO05D010044 3.3e-37 159.1 185 44.9
AL4G26690 Arabidopsis lyrata HOM05D008191 ORTHO05D010044 4.4e-37 158.7 185 45.9
Carub.0005s2245 Capsella rubella HOM05D008191 ORTHO05D010044 1.3e-36 157.1 186 46.2
AL1G25150 Arabidopsis lyrata HOM05D008191 ORTHO05D010044 2.8e-36 156.0 160 50.0
AL5G36930 Arabidopsis lyrata HOM05D008191 ORTHO05D010044 3.7e-36 155.6 185 45.4
AT3G55680 Arabidopsis thaliana HOM05D008191 ORTHO05D010044 2.4e-35 152.9 185 43.2
Carub.0007s2161 Capsella rubella HOM05D008191 ORTHO05D010044 2.4e-35 152.9 187 44.9
AL6G44630 Arabidopsis lyrata HOM05D008191 ORTHO05D010044 4.1e-35 152.1 185 45.9
Carub.0004s1276 Capsella rubella HOM05D008191 ORTHO05D010044 6.1e-31 138.3 182 40.7
CARHR125080 Cardamine hirsuta HOM05D008191 ORTHO05D010044 8.8e-30 134.4 182 41.8
Thhalv10017899m.g Eutrema salsugineum HOM05D008191 ORTHO05D010044 1.7e-28 130.2 182 40.7
Aa31LG5G5510 Aethionema arabicum HOM05D008191 ORTHO05D010044 2.0e-26 123.2 185 34.6
Aa31LG5G5470 Aethionema arabicum HOM05D008191 ORTHO05D010044 5.9e-26 121.7 175 37.1
Sp6g13250 Schrenkiella parvula HOM05D008191 ORTHO05D010044 7.2e-24 114.8 150 40.7
C09p39710 Brassica napus HOM05D008191 ORTHO05D010044 1.2e-23 114.0 185 38.4
BolC9t56860H Brassica oleracea HOM05D008191 ORTHO05D010044 1.2e-23 114.0 185 38.4
THA.LOC104826194 Tarenaya hassleriana HOM05D008191 ORTHO05D010044 2.3e-22 109.8 172 35.5
Aa31LG5G5520 Aethionema arabicum HOM05D008191 ORTHO05D010044 6.8e-22 108.2 176 35.2
Aa31sc1610G10 Aethionema arabicum HOM05D008191 ORTHO05D010044 6.8e-22 108.2 176 35.2
THA.LOC104827389 Tarenaya hassleriana HOM05D008191 ORTHO05D010044 1.2e-21 107.5 178 33.7
Thhalv10017285m.g Eutrema salsugineum HOM05D008191 ORTHO05D010044 1.6e-15 87.0 174 31.0
Aa31LG5G5460 Aethionema arabicum HOM05D008191 ORTHO05D010044 4.0e-14 82.4 183 30.1
Aa31LG5G5450 Aethionema arabicum HOM05D008191 ORTHO05D010044 2.0e-13 80.1 183 27.9
CARHR125050 Cardamine hirsuta HOM05D008191 ORTHO05D010044 2.6e-13 79.7 66 57.6
TAR362G0352 Trochodendron aralioides HOM05D008191 ORTHO05D010044 7.0e-11 71.6 177 28.8
Sabra02G0164100 Salix brachista HOM05D008191 ORTHO05D010044 9.2e-11 71.2 152 29.6
Potri.002G191500 Populus trichocarpa HOM05D008191 ORTHO05D010044 2.0e-10 70.1 152 28.3
Aa31LG5G5480 Aethionema arabicum HOM05D008191 ORTHO05D010044 4.6e-10 68.9 110 33.6
COL.COLO4_23184 Corchorus olitorius HOM05D008191 ORTHO05D010044 3.0e-09 66.2 175 26.9
Gorai.001G145900 Gossypium raimondii HOM05D008191 ORTHO05D010044 1.9e-08 63.5 172 25.0
Gohir.D07G134300 Gossypium hirsutum HOM05D008191 ORTHO05D010044 5.6e-08 62.0 172 25.0
PSO724G0909 Papaver somniferum HOM05D008191 ORTHO05D010044 6.2e-07 58.5 155 27.1


User provided reference genes

Program Settings