Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT2G31083 Arabidopsis thaliana HOM05D008879 ORTHO05D010552 6.4e-55 217.2 115 100.0
AL4G26260 Arabidopsis lyrata HOM05D008879 ORTHO05D010552 2.2e-31 139.0 82 90.2
Carub.0004s1233 Capsella rubella HOM05D008879 ORTHO05D010552 8.7e-28 127.1 81 81.5
Carub.0004s1234 Capsella rubella HOM05D008879 ORTHO05D010552 3.3e-27 125.2 82 81.7
AT2G31085 Arabidopsis thaliana HOM05D008879 ORTHO05D010552 1.6e-26 122.9 82 79.3
CARHR124660 Cardamine hirsuta HOM05D008879 ORTHO05D010552 6.3e-26 120.9 81 79.0
A05p14570 Brassica napus HOM05D008879 ORTHO05D010552 1.1e-25 120.2 81 76.5
CARHR124670 Cardamine hirsuta HOM05D008879 ORTHO05D010552 1.1e-25 120.2 81 79.0
Thhalv10017588m.g Eutrema salsugineum HOM05D008879 ORTHO05D010552 1.8e-25 119.4 82 75.6
Sp4g13570 Schrenkiella parvula HOM05D008879 ORTHO05D010552 1.8e-25 119.4 82 76.8
AL4G26270 Arabidopsis lyrata HOM05D008879 ORTHO05D010552 4.1e-25 118.2 81 76.5
C03p20490 Brassica napus HOM05D008879 ORTHO05D010552 4.1e-25 118.2 82 79.3
BcaC02g11194 Brassica carinata HOM05D008879 ORTHO05D010552 9.0e-25 117.1 81 75.3
C04p19410 Brassica napus HOM05D008879 ORTHO05D010552 9.0e-25 117.1 81 75.3
BolC4t23473H Brassica oleracea HOM05D008879 ORTHO05D010552 9.0e-25 117.1 81 75.3
BcaC01g05980 Brassica carinata HOM05D008879 ORTHO05D010552 1.2e-24 116.7 82 78.0
BolC3t14429H Brassica oleracea HOM05D008879 ORTHO05D010552 1.2e-24 116.7 82 78.0
BcaB01g04065 Brassica carinata HOM05D008879 ORTHO05D010552 1.5e-24 116.3 82 74.4
BcaB06g28488 Brassica carinata HOM05D008879 ORTHO05D010552 1.0e-23 113.6 82 74.4
C04p60330 Brassica napus HOM05D008879 ORTHO05D010552 1.0e-23 113.6 82 74.4
BolC4t27533H Brassica oleracea HOM05D008879 ORTHO05D010552 1.0e-23 113.6 82 74.4
A03p17370 Brassica napus HOM05D008879 ORTHO05D010552 2.9e-23 112.1 83 77.1
BcaB06g28411 Brassica carinata HOM05D008879 ORTHO05D010552 6.5e-23 110.9 82 72.0
A04p23850 Brassica napus HOM05D008879 ORTHO05D010552 6.5e-23 110.9 82 72.0
BraA03t11008Z Brassica rapa HOM05D008879 ORTHO05D010552 6.5e-23 110.9 83 77.1
BraA04t17908Z Brassica rapa HOM05D008879 ORTHO05D010552 6.5e-23 110.9 82 72.0
BcaB02g10362 Brassica carinata HOM05D008879 ORTHO05D010552 2.3e-20 102.4 81 67.9
Aa31LG5G5820 Aethionema arabicum HOM05D008879 ORTHO05D010552 5.3e-17 91.3 62 71.0
THA.LOC104815845 Tarenaya hassleriana HOM05D008879 ORTHO05D010552 1.2e-16 90.1 82 58.5
THA.LOC104826219 Tarenaya hassleriana HOM05D008879 ORTHO05D010552 4.5e-16 88.2 82 61.0
THA.LOC104826220 Tarenaya hassleriana HOM05D008879 ORTHO05D010552 4.5e-16 88.2 82 61.0
Ciclev10018336m.g Citrus clementina HOM05D008879 ORTHO05D010552 2.8e-10 68.9 77 51.9
Haze_13339 Corylus avellana HOM05D008879 ORTHO05D010552 4.1e-09 65.1 116 47.4
Potri.019G090800 Populus trichocarpa HOM05D008879 ORTHO05D010552 9.1e-09 63.9 74 48.6
Potri.001G376200 Populus trichocarpa HOM05D008879 ORTHO05D010552 2.6e-08 62.4 82 43.9
TWI14G0991 Tripterygium wilfordii HOM05D008879 ORTHO05D010552 4.5e-08 61.6 83 49.4
Cfa014710 Carpinus fangiana HOM05D008879 ORTHO05D010552 5.9e-08 61.2 83 50.6
Sabra19G0104400 Salix brachista HOM05D008879 ORTHO05D010552 1.7e-07 59.7 85 42.4
Lsat_1_v5_gn_7_23461 Lactuca sativa HOM05D012232 ORTHO05D010552 6.5e-07 57.8 72 45.8
Gohir.D09G002000 Gossypium hirsutum HOM05D045456 ORTHO05D010552 8.5e-07 57.4 78 48.7
Gorai.006G002100 Gossypium raimondii HOM05D045456 ORTHO05D010552 8.5e-07 57.4 78 48.7
TAR624G1413 Trochodendron aralioides HOM05D000001 ORTHO05D000003 1.1e-06 57.0 82 41.5
Sabra13G0100400 Salix brachista HOM05D008879 ORTHO05D010552 3.2e-06 55.5 62 50.0
CSS0029563 Camellia sinensis var. sinensis HOM05D012232 ORTHO05D010552 5.5e-06 54.7 54 55.6
CSS0045732 Camellia sinensis var. sinensis HOM05D012232 ORTHO05D010552 5.5e-06 54.7 54 55.6
Lj3g0019989 Lotus japonicus HOM05D010237 ORTHO05D012351 9.4e-06 53.9 83 41.0


User provided reference genes

Program Settings