Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT2G31082 Arabidopsis thaliana HOM05D011249 ORTHO05D013690 3.4e-40 167.9 87 100.0
AL426U10010 Arabidopsis lyrata HOM05D011249 ORTHO05D013690 5.0e-36 154.1 84 94.0
AL4G26250 Arabidopsis lyrata HOM05D011249 ORTHO05D013690 5.0e-36 154.1 84 94.0
Carub.0004s1232 Capsella rubella HOM05D011249 ORTHO05D013690 5.6e-35 150.6 84 91.7
CARHR124650 Cardamine hirsuta HOM05D011249 ORTHO05D013690 2.9e-31 138.3 84 83.3
Sp4g13560 Schrenkiella parvula HOM05D011249 ORTHO05D013690 8.1e-26 120.2 84 77.4
BcaB01g04066 Brassica carinata HOM05D011249 ORTHO05D013690 1.4e-25 119.4 84 76.2
BcaB06g28483 Brassica carinata HOM05D011249 ORTHO05D013690 2.3e-25 118.6 84 75.0
BcaB06g28486 Brassica carinata HOM05D011249 ORTHO05D013690 2.3e-25 118.6 84 75.0
C04p60310 Brassica napus HOM05D011249 ORTHO05D013690 2.3e-25 118.6 84 75.0
BolC4t27532H Brassica oleracea HOM05D011249 ORTHO05D013690 2.3e-25 118.6 84 75.0
Thhalv10017928m.g Eutrema salsugineum HOM05D011249 ORTHO05D013690 4.0e-25 117.9 84 75.0
BcaB06g28410 Brassica carinata HOM05D011249 ORTHO05D013690 6.8e-25 117.1 84 72.6
A04p23830 Brassica napus HOM05D011249 ORTHO05D013690 1.2e-24 116.3 84 71.4
BraA04t17907Z Brassica rapa HOM05D011249 ORTHO05D013690 2.0e-24 115.5 84 72.6
Aa31LG5G5830 Aethionema arabicum HOM05D011249 ORTHO05D013690 5.1e-12 74.3 50 74.0
Manes.17G053400 Manihot esculenta HOM05D012232 ORTHO05D013262 2.4e-06 55.5 82 39.0
Manes.16G036050 Manihot esculenta HOM05D012232 ORTHO05D013262 4.2e-06 54.7 84 36.9


User provided reference genes

Program Settings