Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT2G31035 Arabidopsis thaliana HOM05D012434 ORTHO05D014341 1.7e-41 172.2 84 100.0
AL4G26060 Arabidopsis lyrata HOM05D012434 ORTHO05D014341 4.0e-38 161.0 84 90.5
AL4G26140 Arabidopsis lyrata HOM05D012434 ORTHO05D014341 4.0e-38 161.0 84 90.5
Carub.0004s1224 Capsella rubella HOM05D012434 ORTHO05D014341 8.9e-38 159.8 84 91.7
AT2G31030 Arabidopsis thaliana HOM05D000933 ORTHO05D000820 1.2e-34 149.4 80 88.8
CARHR124560 Cardamine hirsuta HOM05D012434 ORTHO05D014341 5.6e-32 140.6 84 84.5
Sp4g13500 Schrenkiella parvula HOM05D012434 ORTHO05D014341 7.3e-32 140.2 84 77.4
C03p20430 Brassica napus HOM05D012434 ORTHO05D014341 2.3e-30 135.2 84 75.0
BolC3t14421H Brassica oleracea HOM05D012434 ORTHO05D014341 2.3e-30 135.2 84 75.0
A03p17310 Brassica napus HOM05D012434 ORTHO05D014341 2.0e-29 132.1 84 73.8
A03p17320 Brassica napus HOM05D012434 ORTHO05D014341 2.0e-29 132.1 84 73.8
BraA03t11004Z Brassica rapa HOM05D012434 ORTHO05D014341 7.5e-29 130.2 84 72.6
Aa31LG5G5870 Aethionema arabicum HOM05D012434 ORTHO05D014341 1.7e-28 129.0 84 69.0
THA.LOC104800844 Tarenaya hassleriana HOM05D012434 ORTHO05D014341 2.3e-22 108.6 84 63.1
BcaB01g04067 Brassica carinata HOM05D000239 ORTHO05D003106 2.5e-16 88.6 54 75.9
Sabra14G0077000 Salix brachista HOM05D012434 ORTHO05D014341 1.6e-07 59.3 67 38.8


User provided reference genes

Program Settings