Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT2G30960 Arabidopsis thaliana HOM05D012320 ORTHO05D014318 1.5e-123 446.4 261 100.0
AL4G25990 Arabidopsis lyrata HOM05D012320 ORTHO05D014318 7.0e-65 251.5 278 71.2
Carub.0004s1218 Capsella rubella HOM05D012320 ORTHO05D014318 3.7e-42 176.0 273 57.1
Thhalv10017128m.g Eutrema salsugineum HOM05D012320 ORTHO05D014318 3.8e-39 166.0 267 47.6
CARHR124480 Cardamine hirsuta HOM05D012320 ORTHO05D014318 2.9e-26 123.2 190 47.4
A05p14680 Brassica napus HOM05D012320 ORTHO05D014318 2.0e-24 117.1 192 46.9
Sp4g13450 Schrenkiella parvula HOM05D012320 ORTHO05D014318 2.3e-23 113.6 283 39.6
BraA05t20397Z Brassica rapa HOM05D012320 ORTHO05D014318 2.8e-21 106.7 201 43.8
BcaC02g11182 Brassica carinata HOM05D012320 ORTHO05D014318 4.9e-18 95.9 263 35.7
C04p19530 Brassica napus HOM05D012320 ORTHO05D014318 4.9e-18 95.9 263 35.7
BolC4t23485H Brassica oleracea HOM05D012320 ORTHO05D014318 4.9e-18 95.9 263 35.7
Aa31LG5G5940 Aethionema arabicum HOM05D012320 ORTHO05D014318 1.1e-17 94.7 313 34.2
BcaB02g10355 Brassica carinata HOM05D012320 ORTHO05D014318 1.4e-17 94.4 264 39.4
C05p04680 Brassica napus HOM05D011279 ORTHO05D013458 1.8e-12 77.4 258 28.7
BolC5t29240H Brassica oleracea HOM05D011279 ORTHO05D013458 1.8e-12 77.4 258 28.7
BcaC05g24272 Brassica carinata HOM05D011279 ORTHO05D013458 6.8e-12 75.5 253 28.5
A10p05090 Brassica napus HOM05D011279 ORTHO05D013458 4.4e-11 72.8 271 29.2
Sp1g05180 Schrenkiella parvula HOM05D011279 ORTHO05D013458 1.6e-08 64.3 157 33.8
BraA10t42774Z Brassica rapa HOM05D011279 ORTHO05D013458 3.5e-08 63.2 251 28.7
BraA09t42033Z Brassica rapa HOM05D011279 ORTHO05D013458 1.0e-07 61.6 247 26.7
C08p51260 Brassica napus HOM05D011279 ORTHO05D013458 1.7e-07 60.8 198 31.8
BolC8t52652H Brassica oleracea HOM05D011279 ORTHO05D013458 1.7e-07 60.8 198 31.8
BcaB02g06794 Brassica carinata HOM05D011279 ORTHO05D013458 3.9e-07 59.7 241 29.5
A09p67000 Brassica napus HOM05D011279 ORTHO05D013458 8.6e-07 58.5 247 27.1
CARHR006030 Cardamine hirsuta HOM05D011279 ORTHO05D013458 8.6e-07 58.5 39 69.2
AT1G06420 Arabidopsis thaliana HOM05D011279 ORTHO05D013458 1.9e-06 57.4 32 81.2
BcaC07g42066 Brassica carinata HOM05D011279 ORTHO05D013458 5.6e-06 55.8 254 26.4


User provided reference genes

Program Settings