Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT2G30930 Arabidopsis thaliana HOM05D009265 ORTHO05D011682 1.4e-74 283.1 165 100.0
Carub.0004s1213 Capsella rubella HOM05D009265 ORTHO05D011682 3.5e-46 188.7 164 72.0
AL4G25870 Arabidopsis lyrata HOM05D009265 ORTHO05D011682 1.7e-45 186.4 162 72.8
Thhalv10017317m.g Eutrema salsugineum HOM05D009265 ORTHO05D011682 3.5e-38 162.2 171 63.7
BcaB06g28394 Brassica carinata HOM05D009265 ORTHO05D011682 4.7e-35 151.8 171 61.4
CARHR124430 Cardamine hirsuta HOM05D009265 ORTHO05D011682 5.2e-34 148.3 170 58.8
Sp4g13400 Schrenkiella parvula HOM05D009265 ORTHO05D011682 4.2e-31 138.7 190 54.7
A04p23620 Brassica napus HOM05D009265 ORTHO05D011682 5.4e-31 138.3 172 57.0
BraA04t17888Z Brassica rapa HOM05D009265 ORTHO05D011682 5.4e-31 138.3 172 57.0
BcaB06g28461 Brassica carinata HOM05D009265 ORTHO05D011682 1.3e-29 133.7 172 55.8
BolC4t27505H Brassica oleracea HOM05D009265 ORTHO05D011682 1.3e-29 133.7 172 55.8
BraA05t20402Z Brassica rapa HOM05D009265 ORTHO05D011682 1.9e-28 129.8 189 50.8
A05p14740 Brassica napus HOM05D009265 ORTHO05D011682 2.8e-27 125.9 189 50.3
BcaC02g11175 Brassica carinata HOM05D009265 ORTHO05D011682 2.2e-24 116.3 189 47.1
C04p19730 Brassica napus HOM05D009265 ORTHO05D011682 2.2e-24 116.3 189 47.1
BolC4t23506H Brassica oleracea HOM05D009265 ORTHO05D011682 2.2e-24 116.3 189 47.1
Carub.0001s0591 Capsella rubella HOM05D009265 ORTHO05D011682 1.1e-23 114.0 127 52.0
A10p05190 Brassica napus HOM05D009265 ORTHO05D011682 2.4e-23 112.8 87 65.5
AT1G06540 Arabidopsis thaliana HOM05D009265 ORTHO05D011682 7.1e-23 111.3 160 45.0
Thhalv10009408m.g Eutrema salsugineum HOM05D009265 ORTHO05D011682 9.3e-23 110.9 163 44.2
AL1G16570 Arabidopsis lyrata HOM05D009265 ORTHO05D011682 2.7e-22 109.4 161 44.1
BraA10t42786Z Brassica rapa HOM05D009265 ORTHO05D011682 1.0e-21 107.5 87 63.2
Sp1g05300 Schrenkiella parvula HOM05D009265 ORTHO05D011682 1.0e-21 107.5 163 43.6
Aa31LG1G7640 Aethionema arabicum HOM05D009265 ORTHO05D011682 1.3e-21 107.1 175 40.0
BolC5t29252H Brassica oleracea HOM05D009265 ORTHO05D011682 1.3e-21 107.1 87 63.2
BcaB02g06782 Brassica carinata HOM05D009265 ORTHO05D011682 3.3e-20 102.4 86 61.6
THA.LOC104800822 Tarenaya hassleriana HOM05D009265 ORTHO05D011682 3.3e-20 102.4 131 49.6
Aa31LG5G5990 Aethionema arabicum HOM05D009265 ORTHO05D011682 8.1e-19 97.8 158 50.0
THA.LOC104826235 Tarenaya hassleriana HOM05D009265 ORTHO05D011682 2.4e-18 96.3 167 44.9
C04p60020 Brassica napus HOM05D004710 ORTHO05D005445 1.5e-17 93.6 142 53.5
BcaB02g10349 Brassica carinata HOM05D009265 ORTHO05D095729 8.7e-13 77.8 189 38.1
A04p23630 Brassica napus HOM05D009265 ORTHO05D033113 3.7e-11 72.4 137 43.8
BolC4t27511H Brassica oleracea HOM05D009265 ORTHO05D033113 8.1e-11 71.2 74 60.8
C04p60080 Brassica napus HOM05D009265 ORTHO05D033113 1.8e-10 70.1 137 42.3


User provided reference genes

Program Settings