Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT2G30790 Arabidopsis thaliana HOM05D003634 ORTHO05D004146 8.8e-66 253.4 126 100.0
AL4G25720 Arabidopsis lyrata HOM05D003634 ORTHO05D004146 7.5e-65 250.4 126 98.4
Carub.0004s1200 Capsella rubella HOM05D003634 ORTHO05D004146 2.2e-64 248.8 126 97.6
Thhalv10017096m.g Eutrema salsugineum HOM05D003634 ORTHO05D004146 2.8e-64 248.4 126 96.8
CARHR124260 Cardamine hirsuta HOM05D003634 ORTHO05D004146 4.9e-64 247.7 126 96.8
BcaB02g10342 Brassica carinata HOM05D003634 ORTHO05D004146 8.3e-64 246.9 126 96.8
BcaC02g11165 Brassica carinata HOM05D003634 ORTHO05D004146 4.1e-63 244.6 126 95.2
A05p14800 Brassica napus HOM05D003634 ORTHO05D004146 4.1e-63 244.6 126 95.2
C04p19800 Brassica napus HOM05D003634 ORTHO05D004146 4.1e-63 244.6 126 95.2
BolC4t23513H Brassica oleracea HOM05D003634 ORTHO05D004146 4.1e-63 244.6 126 95.2
BraA05t20408Z Brassica rapa HOM05D003634 ORTHO05D004146 5.4e-63 244.2 126 95.2
Aa31LG1G7720 Aethionema arabicum HOM05D003634 ORTHO05D004146 2.7e-62 241.9 126 93.7
AL1G16690 Arabidopsis lyrata HOM05D003634 ORTHO05D004146 1.0e-61 240.0 126 92.9
AT1G06680 Arabidopsis thaliana HOM05D003634 ORTHO05D004146 1.0e-61 240.0 126 92.9
Thhalv10008504m.g Eutrema salsugineum HOM05D003634 ORTHO05D004146 1.0e-61 240.0 126 92.9
Carub.0001s0601 Capsella rubella HOM05D003634 ORTHO05D004146 1.3e-61 239.6 126 92.1
BcaNung05935 Brassica carinata HOM05D003634 ORTHO05D004146 8.6e-61 236.9 126 92.1
C05p04870 Brassica napus HOM05D003634 ORTHO05D004146 1.1e-60 236.5 126 91.3
BolC5t29259H Brassica oleracea HOM05D003634 ORTHO05D004146 1.1e-60 236.5 126 91.3
A08p35900 Brassica napus HOM05D003634 ORTHO05D004146 1.5e-60 236.1 126 91.3
C08p02670 Brassica napus HOM05D003634 ORTHO05D004146 1.5e-60 236.1 126 91.3
BolC8t47063H Brassica oleracea HOM05D003634 ORTHO05D004146 1.5e-60 236.1 126 91.3
BraA08t35497Z Brassica rapa HOM05D003634 ORTHO05D004146 1.5e-60 236.1 126 91.3
Sp1g05410 Schrenkiella parvula HOM05D003634 ORTHO05D004146 1.5e-60 236.1 126 90.5
CARHR006360 Cardamine hirsuta HOM05D003634 ORTHO05D004146 2.5e-60 235.3 126 89.7
BcaC07g42054 Brassica carinata HOM05D003634 ORTHO05D004146 3.3e-60 235.0 126 90.5
A09p66850 Brassica napus HOM05D003634 ORTHO05D004146 3.3e-60 235.0 126 90.5
C08p51070 Brassica napus HOM05D003634 ORTHO05D004146 3.3e-60 235.0 126 90.5
BolC8t52634H Brassica oleracea HOM05D003634 ORTHO05D004146 3.3e-60 235.0 126 90.5
BraA09t42022Z Brassica rapa HOM05D003634 ORTHO05D004146 3.3e-60 235.0 126 90.5
A10p05270 Brassica napus HOM05D003634 ORTHO05D004146 4.2e-60 234.6 126 90.5
BraA10t42792Z Brassica rapa HOM05D003634 ORTHO05D004146 4.2e-60 234.6 126 90.5
THA.LOC104826247 Tarenaya hassleriana HOM05D003634 ORTHO05D004146 1.0e-58 229.9 126 86.5
THA.LOC104816082 Tarenaya hassleriana HOM05D003634 ORTHO05D004146 5.2e-58 227.6 126 84.1
Atru.chr6.2016 Acer truncatum HOM05D003634 ORTHO05D004146 2.6e-57 225.3 126 85.7
Hma1.2p1_0571F.1_g180910 Hydrangea macrophylla HOM05D003634 ORTHO05D004146 5.7e-57 224.2 126 86.5
Aa31LG5G6070 Aethionema arabicum HOM05D003634 ORTHO05D004146 1.3e-56 223.0 147 77.6
Nitab4.5_0006644g0080 Nicotiana tabacum HOM05D003634 ORTHO05D004146 1.3e-56 223.0 125 85.6
Gohir.A10G151800 Gossypium hirsutum HOM05D003634 ORTHO05D004146 2.2e-56 222.2 126 86.5
Gorai.011G126200 Gossypium raimondii HOM05D003634 ORTHO05D004146 2.2e-56 222.2 126 86.5
Solyc07g044860.3 Solanum lycopersicum HOM05D003634 ORTHO05D004146 2.2e-56 222.2 125 84.8
Sopen07g023420 Solanum pennellii HOM05D003634 ORTHO05D004146 2.2e-56 222.2 125 84.8
Gohir.D04G034900 Gossypium hirsutum HOM05D003634 ORTHO05D004146 2.9e-56 221.9 126 85.7
Gorai.012G039400 Gossypium raimondii HOM05D003634 ORTHO05D004146 2.9e-56 221.9 126 85.7
Gohir.D10G114500 Gossypium hirsutum HOM05D003634 ORTHO05D004146 4.9e-56 221.1 126 85.7
CAN.G212.2 Capsicum annuum HOM05D003634 ORTHO05D004146 6.4e-56 220.7 125 84.0
Gohir.A05G380700 Gossypium hirsutum HOM05D003634 ORTHO05D004146 6.4e-56 220.7 126 84.9
MBI02_g35794_MAGBIO Magnolia biondii HOM05D003634 ORTHO05D004146 8.3e-56 220.3 126 85.7
Nitab4.5_0000019g0250 Nicotiana tabacum HOM05D003634 ORTHO05D004146 8.3e-56 220.3 125 83.2
CAN.G488.26 Capsicum annuum HOM05D003634 ORTHO05D004146 1.1e-55 219.9 125 84.0
vmacro08742 Vaccinium macrocarpon HOM05D003634 ORTHO05D004146 1.1e-55 219.9 126 85.7
ECA234G0286 Erigeron canadensis HOM05D003634 ORTHO05D004146 1.4e-55 219.5 126 84.9
Ah.03g147560 Amaranthus hybridus HOM05D003634 ORTHO05D004146 1.8e-55 219.2 126 85.7
Nitab4.5_0005601g0020 Nicotiana tabacum HOM05D003634 ORTHO05D004146 3.2e-55 218.4 125 84.0
THA.LOC104800813 Tarenaya hassleriana HOM05D003634 ORTHO05D004146 3.2e-55 218.4 126 82.5
Ah.02g120770 Amaranthus hybridus HOM05D003634 ORTHO05D004146 4.1e-55 218.0 126 83.3
arahy.Tifrunner.gnm1.ann1.MMUF9T Arachis hypogaea HOM05D003634 ORTHO05D004146 4.1e-55 218.0 125 84.8
Lj1A651T46 Lonicera japonica HOM05D003634 ORTHO05D004146 4.1e-55 218.0 126 84.1
Rhsim12G0013500 Rhododendron simsii HOM05D003634 ORTHO05D004146 4.1e-55 218.0 126 84.9
Sc07g0004260 Simmondsia chinensis HOM05D003634 ORTHO05D004146 5.4e-55 217.6 126 83.3
Eucgr.A02039 Eucalyptus grandis HOM05D003634 ORTHO05D004146 7.0e-55 217.2 126 81.7
arahy.Tifrunner.gnm1.ann1.TCR54Y Arachis hypogaea HOM05D003634 ORTHO05D004146 1.2e-54 216.5 125 84.0
ClCG07G010800 Citrullus lanatus HOM05D003634 ORTHO05D004146 1.2e-54 216.5 126 83.3
Oeu056847.1 Olea europaea HOM05D003634 ORTHO05D004146 1.2e-54 216.5 126 83.3
PGR142G4178 Punica granatum HOM05D003634 ORTHO05D004146 1.2e-54 216.5 126 81.0
SGA_v2.0_scaffold49G18386 Striga asiatica HOM05D003634 ORTHO05D004146 1.2e-54 216.5 125 84.0
DCAR_009820 Daucus carota HOM05D003634 ORTHO05D004146 1.6e-54 216.1 126 83.3
FAN14G5409 Fragaria x ananassa HOM05D003634 ORTHO05D004146 1.6e-54 216.1 125 84.0
TWI14G0595 Tripterygium wilfordii HOM05D003634 ORTHO05D004146 1.6e-54 216.1 126 83.3
EL10Ac6g15357 Beta vulgaris HOM05D003634 ORTHO05D004146 2.0e-54 215.7 126 81.7
FvH4_6g38900 Fragaria vesca HOM05D003634 ORTHO05D004146 2.0e-54 215.7 125 84.0
FAN02G0185 Fragaria x ananassa HOM05D003634 ORTHO05D004146 2.0e-54 215.7 125 84.0
FAN09G2615 Fragaria x ananassa HOM05D003634 ORTHO05D004146 2.0e-54 215.7 125 84.0
Peaxi162Scf00359g01218 Petunia axillaris HOM05D003634 ORTHO05D004146 2.0e-54 215.7 125 83.2
Prupe.3G179400 Prunus persica HOM05D003634 ORTHO05D004146 2.0e-54 215.7 125 84.0
TPR.G8779 Trifolium pratense HOM05D003634 ORTHO05D004146 2.0e-54 215.7 125 84.0
Actinidia07505 Actinidia chinensis HOM05D003634 ORTHO05D004146 2.7e-54 215.3 126 83.3
Aqoxy1G01593 Aquilegia oxysepala HOM05D003634 ORTHO05D004146 3.5e-54 214.9 126 84.1
Ca_13941_v3 Cicer arietinum L. HOM05D003634 ORTHO05D004146 3.5e-54 214.9 126 83.3
DCAR_023039 Daucus carota HOM05D003634 ORTHO05D004146 3.5e-54 214.9 126 83.3
TWI23G0402 Tripterygium wilfordii HOM05D003634 ORTHO05D004146 3.5e-54 214.9 126 83.3
CSS0028528 Camellia sinensis var. sinensis HOM05D003634 ORTHO05D004146 4.6e-54 214.5 126 82.5
Lj8C98T13 Lonicera japonica HOM05D003634 ORTHO05D004146 4.6e-54 214.5 125 84.0
Medtr5g090410 Medicago truncatula HOM05D003634 ORTHO05D004146 4.6e-54 214.5 125 84.0
CANSAT64G2967 Cannabis sativa HOM05D003634 ORTHO05D004146 5.9e-54 214.2 126 84.1
CiPaw.04G137000 Carya illinoinensis HOM05D003634 ORTHO05D004146 5.9e-54 214.2 126 81.7
RcHm_v2.0_Chr2g0152481 Rosa chinensis HOM05D003634 ORTHO05D004146 5.9e-54 214.2 125 83.2
arahy.Tifrunner.gnm1.ann1.1944SK Arachis hypogaea HOM05D003634 ORTHO05D004146 7.8e-54 213.8 122 84.4
Cpa.g.sc187.7 Carica papaya HOM05D003634 ORTHO05D004146 7.8e-54 213.8 126 81.0
AUR62017838 Chenopodium quinoa HOM05D003634 ORTHO05D004146 7.8e-54 213.8 126 81.7
FAN05G3719 Fragaria x ananassa HOM05D003634 ORTHO05D004146 7.8e-54 213.8 125 83.2
HanXRQChr05g0129681 Helianthus annuus HOM05D003634 ORTHO05D004146 7.8e-54 213.8 126 81.0
arahy.Tifrunner.gnm1.ann1.30A6BG Arachis hypogaea HOM05D003634 ORTHO05D004146 1.0e-53 213.4 125 83.2
Migut.H01272 Erythranthe guttata HOM05D003634 ORTHO05D004146 1.0e-53 213.4 125 81.6
Lalb_Chr04g0249011 Lupinus albus HOM05D003634 ORTHO05D004146 1.0e-53 213.4 125 83.2
BcaC07g36796 Brassica carinata HOM05D003634 ORTHO05D004146 1.7e-53 212.6 110 91.8
CDE12G0092 Ceratophyllum demersum HOM05D003634 ORTHO05D004146 1.7e-53 212.6 126 81.7
Phvul.006G027801 Phaseolus vulgaris HOM05D003634 ORTHO05D004146 1.7e-53 212.6 126 82.5
SalBow7G4383 Salvia bowleyana HOM05D003634 ORTHO05D004146 1.7e-53 212.6 125 81.6
VMungo0540G1926 Vigna mungo HOM05D003634 ORTHO05D004146 1.7e-53 212.6 126 83.3
AUR62003524 Chenopodium quinoa HOM05D003634 ORTHO05D004146 2.3e-53 212.2 126 80.2
CsaV3_4G007520 Cucumis sativus L. HOM05D003634 ORTHO05D004146 2.3e-53 212.2 126 81.0
ECA246G2888 Erigeron canadensis HOM05D003634 ORTHO05D004146 2.3e-53 212.2 126 80.2
Lj6g0020294 Lotus japonicus HOM05D003634 ORTHO05D004146 2.3e-53 212.2 126 81.7
PSO541G1729 Papaver somniferum HOM05D003634 ORTHO05D004146 2.3e-53 212.2 126 81.0
PSO675G5089 Papaver somniferum HOM05D003634 ORTHO05D004146 2.3e-53 212.2 126 81.0
HanXRQChr04g0099261 Helianthus annuus HOM05D003634 ORTHO05D004146 2.9e-53 211.8 126 80.2
Glyma.18G114900 Glycine max HOM05D003634 ORTHO05D004146 5.0e-53 211.1 126 81.0
TPR.G14744 Trifolium pratense HOM05D003634 ORTHO05D004146 5.0e-53 211.1 126 81.0
Cfa023023 Carpinus fangiana HOM05D003634 ORTHO05D004146 6.6e-53 210.7 126 80.2
COL.COLO4_29888 Corchorus olitorius HOM05D003634 ORTHO05D004146 6.6e-53 210.7 126 81.7
Duzib264G1267 Durio zibethinus HOM05D003634 ORTHO05D004146 8.6e-53 210.3 126 80.2
Migut.M00114 Erythranthe guttata HOM05D003634 ORTHO05D004146 1.1e-52 209.9 126 83.3
HanXRQChr06g0171591 Helianthus annuus HOM05D003634 ORTHO05D004146 1.1e-52 209.9 126 78.6
Potri.005G206700 Populus trichocarpa HOM05D003634 ORTHO05D004146 1.1e-52 209.9 126 81.0
unitig_8.g4601 Utricularia gibba HOM05D003634 ORTHO05D004146 1.1e-52 209.9 125 80.8
Glyma.02G282500 Glycine max HOM05D003634 ORTHO05D004146 1.5e-52 209.5 125 81.6
Glyma.08G304200 Glycine max HOM05D003634 ORTHO05D004146 1.5e-52 209.5 126 81.0
Glyma.14G031800 Glycine max HOM05D003634 ORTHO05D004146 1.5e-52 209.5 125 81.6
Potri.002G055700 Populus trichocarpa HOM05D003634 ORTHO05D004146 1.5e-52 209.5 126 81.7
Sed0008663 Sechium edule HOM05D003634 ORTHO05D004146 1.5e-52 209.5 126 80.2
MD17G1132900 Malus domestica HOM05D003634 ORTHO05D004146 1.9e-52 209.1 125 82.4
PGSC0003DMG400000926 Solanum tuberosum HOM05D003634 ORTHO05D004146 1.9e-52 209.1 145 72.4
Lalb_Chr10g0106481 Lupinus albus HOM05D003634 ORTHO05D004146 2.5e-52 208.8 125 80.8
CDE04G2981 Ceratophyllum demersum HOM05D003634 ORTHO05D004146 3.3e-52 208.4 125 80.8
MELO3C016190.2 Cucumis melo HOM05D003634 ORTHO05D004146 3.3e-52 208.4 126 79.4
Medtr3g449930 Medicago truncatula HOM05D003634 ORTHO05D004146 3.3e-52 208.4 126 80.2
Psat2g018280 Pisum sativum HOM05D003634 ORTHO05D004146 3.3e-52 208.4 125 80.8
MD09G1146300 Malus domestica HOM05D003634 ORTHO05D004146 4.3e-52 208.0 125 81.6
Manes.01G131300 Manihot esculenta HOM05D003634 ORTHO05D004146 4.3e-52 208.0 126 80.2
Sed0027030 Sechium edule HOM05D003634 ORTHO05D004146 4.3e-52 208.0 126 78.6
Manes.02G089900 Manihot esculenta HOM05D003634 ORTHO05D004146 5.6e-52 207.6 126 79.4
Phvul.008G196500 Phaseolus vulgaris HOM05D003634 ORTHO05D004146 5.6e-52 207.6 125 80.8
Psat5g189160 Pisum sativum HOM05D003634 ORTHO05D004146 5.6e-52 207.6 126 80.2
Lalb_Chr17g0348121 Lupinus albus HOM05D003634 ORTHO05D004146 7.3e-52 207.2 125 82.4
MBI18_g28201_MAGBIO Magnolia biondii HOM05D003634 ORTHO05D004146 7.3e-52 207.2 126 79.4
MSTRG.14106 Avicennia marina HOM05D003634 ORTHO05D004146 1.2e-51 206.5 126 78.6
LjContig00049g0021127 Lotus japonicus HOM05D003634 ORTHO05D004146 1.2e-51 206.5 125 79.2
Oeu012357.1 Olea europaea HOM05D003634 ORTHO05D004146 1.2e-51 206.5 126 77.8
MSTRG.12265 Avicennia marina HOM05D003634 ORTHO05D004146 2.1e-51 205.7 126 77.8
Os07g0141400 Oryza sativa ssp. japonica HOM05D003634 ORTHO05D004146 4.7e-51 204.5 126 77.8
Sabra05G0157200 Salix brachista HOM05D003634 ORTHO05D004146 8.0e-51 203.8 126 81.0
SEGI_24342 Sequoiadendron giganteum HOM05D003634 ORTHO05D004146 8.0e-51 203.8 126 76.2
Thecc.01G166600 Theobroma cacao HOM05D003634 ORTHO05D004146 8.0e-51 203.8 126 77.8
Ciclev10032502m.g Citrus clementina HOM05D003634 ORTHO05D004146 1.0e-50 203.4 126 80.2
QL08p045530 Quercus lobata HOM05D003634 ORTHO05D004146 1.8e-50 202.6 125 79.2
Sabra02G0045200 Salix brachista HOM05D003634 ORTHO05D004146 1.8e-50 202.6 125 79.2
Zm00001eb117670 Zea mays HOM05D003634 ORTHO05D004146 5.2e-50 201.1 126 77.8
GSVIVG01020818001 Vitis vinifera HOM05D003634 ORTHO05D004146 6.8e-50 200.7 126 77.8
unitig_52.g17321 Utricularia gibba HOM05D003634 ORTHO05D004146 1.5e-49 199.5 126 75.4
Lsat_1_v5_gn_3_35220 Lactuca sativa HOM05D003634 ORTHO05D004146 2.0e-49 199.1 148 69.6
Zm00001eb299760 Zea mays HOM05D003634 ORTHO05D004146 2.6e-49 198.7 126 77.8
Hund04362 Selenicereus undatus HOM05D003634 ORTHO05D004146 3.4e-49 198.4 125 76.8
arahy.Tifrunner.gnm1.ann1.0DED4Z Arachis hypogaea HOM05D003634 ORTHO05D004146 9.8e-49 196.8 133 76.7
Cc05_g00840 Coffea canephora HOM05D003634 ORTHO05D004146 1.3e-48 196.4 126 74.6
SMO276G0004 Selaginella moellendorffii HOM05D003634 ORTHO05D004146 1.4e-47 193.0 126 73.0
ATR0681G398 Amborella trichopoda HOM05D003634 ORTHO05D004146 1.0e-45 186.8 117 76.9
Nitab4.5_0008321g0040 Nicotiana tabacum HOM05D003634 ORTHO05D004146 8.6e-45 183.7 125 75.2
PGR042G1985 Punica granatum HOM05D003634 ORTHO05D004146 8.6e-45 183.7 126 72.2
Pp3c2_23590 Physcomitrium patens HOM05D003634 ORTHO05D004146 1.2e-43 179.9 125 69.6
VMungo0647G2531 Vigna mungo HOM05D003634 ORTHO05D004146 2.8e-43 178.7 105 81.9
Pp3c1_16780 Physcomitrium patens HOM05D003634 ORTHO05D004146 4.7e-43 177.9 125 70.4
Haze_13608 Corylus avellana HOM05D003634 ORTHO05D004146 1.4e-42 176.4 126 71.4
Mapoly0058s0007 Marchantia polymorpha HOM05D003634 ORTHO05D004146 1.8e-42 176.0 119 70.6
Actinidia12527 Actinidia chinensis HOM05D003634 ORTHO05D004146 3.1e-42 175.3 127 74.0
Mapoly0094s0007 Marchantia polymorpha HOM05D003634 ORTHO05D004146 3.1e-42 175.3 125 67.2
Pp3c7_12850 Physcomitrium patens HOM05D003634 ORTHO05D004146 3.1e-42 175.3 125 68.8
Pp3c11_12080 Physcomitrium patens HOM05D003634 ORTHO05D004146 4.0e-42 174.9 125 67.2
Mapoly0058s0006 Marchantia polymorpha HOM05D003634 ORTHO05D004146 5.2e-42 174.5 119 71.4
Pp3c11_11560 Physcomitrium patens HOM05D003634 ORTHO05D004146 1.1e-36 156.8 125 62.4
Actinidia07504 Actinidia chinensis HOM05D003634 ORTHO05D004146 8.1e-35 150.6 126 66.7
CBR_g259 Chara braunii HOM05D003634 ORTHO05D004146 4.0e-34 148.3 124 56.5
MCO12G360 Micromonas commoda HOM05D003634 ORTHO05D004146 8.9e-34 147.1 126 55.6
HPP92_015688 Vanilla planifolia HOM05D003634 ORTHO05D004146 3.4e-33 145.2 88 79.5
Cre12.g550850 Chlamydomonas reinhardtii HOM05D003634 ORTHO05D004146 1.1e-31 140.2 124 59.7
PRCOL_00005580 Prasinoderma coloniale HOM05D003634 ORTHO05D004146 6.0e-30 134.4 126 54.8
Actinidia12528 Actinidia chinensis HOM05D003634 ORTHO05D004146 2.0e-25 119.4 85 74.1
Sp4g13290 Schrenkiella parvula HOM05D003634 ORTHO05D004146 3.3e-20 102.1 54 90.7
Pp3c11_14700 Physcomitrium patens HOM05D003634 ORTHO05D004146 2.8e-19 99.0 85 61.2
Nn7g37873 Nelumbo nucifera HOM05D003634 ORTHO05D004146 4.0e-10 68.6 42 73.8
Oeu056845.1 Olea europaea HOM05D003634 ORTHO05D004146 4.0e-10 68.6 39 79.5
PRCOL_00002970 Prasinoderma coloniale HOM05D003634 ORTHO05D004146 4.6e-06 55.1 81 34.6


User provided reference genes

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