Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT2G30100 Arabidopsis thaliana HOM05D006841 ORTHO05D008607 4.3e-289 997.3 504 100.0
AL4G24870 Arabidopsis lyrata HOM05D006841 ORTHO05D008607 1.4e-271 939.1 508 95.1
Carub.0004s1120 Capsella rubella HOM05D006841 ORTHO05D008607 1.7e-253 879.0 512 88.3
CARHR123400 Cardamine hirsuta HOM05D006841 ORTHO05D008607 4.7e-251 870.9 511 86.7
Thhalv10016546m.g Eutrema salsugineum HOM05D006841 ORTHO05D008607 2.0e-249 865.5 508 87.0
Sp4g12660 Schrenkiella parvula HOM05D006841 ORTHO05D008607 1.7e-245 852.4 508 85.4
C04p58980 Brassica napus HOM05D006841 ORTHO05D008607 1.6e-235 819.3 506 82.8
BolC4t27410H Brassica oleracea HOM05D006841 ORTHO05D008607 2.8e-235 818.5 507 82.4
Aa31LG5G6580 Aethionema arabicum HOM05D006841 ORTHO05D008607 1.5e-233 812.8 514 81.1
BraA04t17817Z Brassica rapa HOM05D006841 ORTHO05D008607 3.5e-230 801.6 509 79.8
A04p22780 Brassica napus HOM05D006841 ORTHO05D008607 2.3e-229 798.9 507 79.7
BcaC02g08056 Brassica carinata HOM05D006841 ORTHO05D008607 1.9e-223 779.2 504 79.2
THA.LOC104800754 Tarenaya hassleriana HOM05D006841 ORTHO05D008607 1.9e-215 752.7 512 76.0
AL59U10050 Arabidopsis lyrata HOM05D006841 ORTHO05D008607 9.9e-209 730.3 447 86.8
Thecc.09G353800 Theobroma cacao HOM05D006841 ORTHO05D008607 1.3e-179 633.6 516 63.8
Atru.chr3.4145 Acer truncatum HOM05D006841 ORTHO05D008607 2.4e-178 629.4 506 63.2
COL.COLO4_11072 Corchorus olitorius HOM05D006841 ORTHO05D008607 9.0e-178 627.5 520 63.3
Duzib170G1072 Durio zibethinus HOM05D006841 ORTHO05D008607 2.2e-176 622.9 516 62.4
Potri.009G075200 Populus trichocarpa HOM05D006841 ORTHO05D008607 1.4e-175 620.2 514 63.2
CiPaw.14G056400 Carya illinoinensis HOM05D006841 ORTHO05D008607 1.9e-175 619.8 520 63.1
Ciclev10028251m.g Citrus clementina HOM05D006841 ORTHO05D008607 7.9e-174 614.4 492 64.4
Duzib168G0722 Durio zibethinus HOM05D006841 ORTHO05D008607 2.3e-173 612.8 516 61.8
Prupe.6G052600 Prunus persica HOM05D006841 ORTHO05D008607 8.7e-173 610.9 511 62.8
Sabra09G0057100 Salix brachista HOM05D006841 ORTHO05D008607 1.5e-172 610.1 514 62.5
CANSAT54G0320 Cannabis sativa HOM05D006841 ORTHO05D008607 5.7e-172 608.2 489 63.0
QL01p039597 Quercus lobata HOM05D006841 ORTHO05D008607 1.6e-171 606.7 511 61.8
Gorai.009G112400 Gossypium raimondii HOM05D006841 ORTHO05D008607 1.1e-170 604.0 516 61.4
MD03G1062600 Malus domestica HOM05D006841 ORTHO05D008607 6.9e-170 601.3 511 60.9
RcHm_v2.0_Chr5g0070721 Rosa chinensis HOM05D006841 ORTHO05D008607 9.0e-170 600.9 511 60.7
ClCG02G019390 Citrullus lanatus HOM05D006841 ORTHO05D008607 1.5e-169 600.1 475 63.8
Gohir.A05G108000 Gossypium hirsutum HOM05D006841 ORTHO05D008607 1.5e-169 600.1 513 60.8
CsaV3_6G016010 Cucumis sativus L. HOM05D006841 ORTHO05D008607 2.6e-169 599.4 459 65.6
Eucgr.B02230 Eucalyptus grandis HOM05D006841 ORTHO05D008607 3.4e-169 599.0 526 59.5
Gohir.D05G108200 Gossypium hirsutum HOM05D006841 ORTHO05D008607 4.5e-169 598.6 516 60.9
Phvul.006G071400 Phaseolus vulgaris HOM05D006841 ORTHO05D008607 5.9e-169 598.2 449 65.5
FAN11G0941 Fragaria x ananassa HOM05D006841 ORTHO05D008607 7.6e-169 597.8 506 61.1
Haze_24381 Corylus avellana HOM05D006841 ORTHO05D008607 1.0e-168 597.4 546 58.2
CiPaw.13G073200 Carya illinoinensis HOM05D006841 ORTHO05D008607 1.3e-168 597.0 522 60.7
MD11G1066200 Malus domestica HOM05D006841 ORTHO05D008607 2.2e-168 596.3 513 60.6
PGR102G0989 Punica granatum HOM05D006841 ORTHO05D008607 2.2e-168 596.3 527 58.4
CSS0042618 Camellia sinensis var. sinensis HOM05D006841 ORTHO05D008607 3.8e-168 595.5 517 59.2
arahy.Tifrunner.gnm1.ann1.1QT3IR Arachis hypogaea HOM05D006841 ORTHO05D008607 5.0e-168 595.1 499 60.7
FvH4_3g39290 Fragaria vesca HOM05D006841 ORTHO05D008607 5.0e-168 595.1 459 64.3
TWI79G1747 Tripterygium wilfordii HOM05D006841 ORTHO05D008607 5.0e-168 595.1 457 65.9
vmacro14612 Vaccinium macrocarpon HOM05D006841 ORTHO05D008607 5.0e-168 595.1 518 59.1
arahy.Tifrunner.gnm1.ann1.UR06JS Arachis hypogaea HOM05D006841 ORTHO05D008607 1.9e-167 593.2 449 64.1
Sed0019546 Sechium edule HOM05D006841 ORTHO05D008607 2.5e-167 592.8 492 61.8
Actinidia34467 Actinidia chinensis HOM05D006841 ORTHO05D008607 3.2e-167 592.4 519 58.8
MELO3C026835.2 Cucumis melo HOM05D006841 ORTHO05D008607 4.2e-167 592.0 459 64.5
Dinv28672 Davidia involucrata HOM05D006841 ORTHO05D008607 4.2e-167 592.0 504 60.5
FAN25G3694 Fragaria x ananassa HOM05D006841 ORTHO05D008607 4.2e-167 592.0 459 63.8
Manes.02G217600 Manihot esculenta HOM05D006841 ORTHO05D008607 9.3e-167 590.9 522 60.2
Glyma.11G167300 Glycine max HOM05D006841 ORTHO05D008607 1.6e-166 590.1 521 58.9
MSTRG.12683 Avicennia marina HOM05D006841 ORTHO05D008607 2.1e-166 589.7 457 64.6
SalBow2G2391 Salvia bowleyana HOM05D006841 ORTHO05D008607 2.1e-166 589.7 454 64.8
FAN21G2904 Fragaria x ananassa HOM05D006841 ORTHO05D008607 4.6e-166 588.6 459 63.6
Glyma.18G059800 Glycine max HOM05D006841 ORTHO05D008607 6.1e-166 588.2 458 63.3
TAR369G0096 Trochodendron aralioides HOM05D006841 ORTHO05D008607 1.3e-165 587.0 458 64.8
Lalb_Chr18g0051231 Lupinus albus HOM05D006841 ORTHO05D008607 3.9e-165 585.5 450 64.2
Rhsim01G0239400 Rhododendron simsii HOM05D006841 ORTHO05D008607 5.1e-165 585.1 516 58.9
HanXRQChr01g0011601 Helianthus annuus HOM05D006841 ORTHO05D008607 4.3e-164 582.0 479 61.2
TAR636G1839 Trochodendron aralioides HOM05D006841 ORTHO05D008607 4.3e-164 582.0 458 64.2
Lj6g0024894 Lotus japonicus HOM05D006841 ORTHO05D008607 7.4e-164 581.3 450 64.4
Psat5g157440 Pisum sativum HOM05D006841 ORTHO05D008607 9.7e-164 580.9 481 60.3
TPR.G32925 Trifolium pratense HOM05D006841 ORTHO05D008607 9.7e-164 580.9 515 58.6
EL10Ac7g15887 Beta vulgaris HOM05D006841 ORTHO05D008607 3.7e-163 578.9 457 63.5
Sc06g0008150 Simmondsia chinensis HOM05D006841 ORTHO05D008607 1.4e-162 577.0 513 60.6
Peaxi162Scf01324g00238 Petunia axillaris HOM05D006841 ORTHO05D008607 1.8e-162 576.6 463 62.9
Hund05042 Selenicereus undatus HOM05D006841 ORTHO05D008607 2.6e-161 572.8 457 62.4
Sopen05g006930 Solanum pennellii HOM05D006841 ORTHO05D008607 2.6e-161 572.8 451 62.7
Medtr3g465390 Medicago truncatula HOM05D006841 ORTHO05D008607 3.4e-161 572.4 516 56.4
Oeu018490.1 Olea europaea HOM05D006841 ORTHO05D008607 4.5e-161 572.0 457 62.6
Solyc05g012140.3 Solanum lycopersicum HOM05D006841 ORTHO05D008607 4.5e-161 572.0 451 62.7
CAN.G707.10 Capsicum annuum HOM05D006841 ORTHO05D008607 1.0e-160 570.9 506 57.5
AUR62009700 Chenopodium quinoa HOM05D006841 ORTHO05D008607 1.3e-160 570.5 457 63.0
Aqoxy1G01268 Aquilegia oxysepala HOM05D006841 ORTHO05D008607 8.5e-160 567.8 451 62.7
AUR62036246 Chenopodium quinoa HOM05D006841 ORTHO05D008607 8.5e-160 567.8 457 62.8
PGSC0003DMG401028313 Solanum tuberosum HOM05D006841 ORTHO05D008607 1.1e-159 567.4 451 62.5
CSS0014141 Camellia sinensis var. sinensis HOM05D006841 ORTHO05D008607 7.9e-158 561.2 517 56.5
Ah.15g096690 Amaranthus hybridus HOM05D006841 ORTHO05D008607 1.0e-157 560.8 457 61.1
Migut.N00773 Erythranthe guttata HOM05D006841 ORTHO05D008607 1.8e-157 560.1 456 62.3
Ah.08g215320 Amaranthus hybridus HOM05D006841 ORTHO05D008607 5.1e-157 558.5 483 58.0
VMungo0540G0160 Vigna mungo HOM05D006841 ORTHO05D008607 3.1e-154 549.3 434 62.9
Lsat_1_v5_gn_5_173260 Lactuca sativa HOM05D006841 ORTHO05D008607 5.3e-154 548.5 463 58.5
PSO017G2874 Papaver somniferum HOM05D006841 ORTHO05D008607 2.0e-153 546.6 454 61.5
PSO349G0316 Papaver somniferum HOM05D006841 ORTHO05D008607 2.2e-152 543.1 454 61.5
MBI15_g21765_MAGBIO Magnolia biondii HOM05D006841 ORTHO05D008607 1.1e-151 540.8 511 55.4
SGA_v2.0_scaffold104G30129 Striga asiatica HOM05D006841 ORTHO05D008607 1.9e-151 540.0 451 61.6
unitig_94.g28363 Utricularia gibba HOM05D006841 ORTHO05D008607 1.9e-151 540.0 496 57.7
CDE06G2104 Ceratophyllum demersum HOM05D006841 ORTHO05D008607 3.3e-148 529.3 488 56.6
Lj2A1088G41 Lonicera japonica HOM05D006841 ORTHO05D008607 3.7e-147 525.8 464 59.5
Ca_14982_v3 Cicer arietinum L. HOM05D006841 ORTHO05D008607 9.1e-146 521.2 488 55.9
ECA248G2088 Erigeron canadensis HOM05D006841 ORTHO05D008607 8.5e-144 514.6 423 59.8
Os05g0353300 Oryza sativa ssp. japonica HOM05D006841 ORTHO05D008607 2.8e-126 456.4 431 53.6
Cc01_g14600 Coffea canephora HOM05D006841 ORTHO05D008607 3.6e-126 456.1 404 55.7
ATR0174G035 Amborella trichopoda HOM05D006841 ORTHO05D008607 6.8e-125 451.8 424 53.5
Zm00001eb286480 Zea mays HOM05D006841 ORTHO05D008607 6.3e-123 445.3 423 52.5
GSVIVG01024686001 Vitis vinifera HOM05D006841 ORTHO05D008607 2.0e-121 440.3 387 58.1
DCAR_007349 Daucus carota HOM05D006841 ORTHO05D008607 3.5e-121 439.5 360 59.2
SEGI_38470 Sequoiadendron giganteum HOM05D006841 ORTHO05D008607 1.7e-104 384.0 432 45.6
HPP92_025104 Vanilla planifolia HOM05D006841 ORTHO05D008607 3.9e-104 382.9 339 57.5
Actinidia23875 Actinidia chinensis HOM05D006841 ORTHO05D008607 3.0e-96 356.7 303 60.7
Mapoly0068s0098 Marchantia polymorpha HOM05D006841 ORTHO05D008607 1.6e-89 334.3 470 39.8
Hma1.2p1_0146F.1_g065520 Hydrangea macrophylla HOM05D006841 ORTHO05D008607 1.0e-88 331.6 259 59.5
CSS0012316 Camellia sinensis var. sinensis HOM05D006841 ORTHO05D008607 4.3e-71 273.1 429 40.1
Nn2g10947 Nelumbo nucifera HOM05D006841 ORTHO05D008607 2.4e-66 257.3 217 63.6
SMO304G0125 Selaginella moellendorffii HOM05D006841 ORTHO05D008607 1.5e-63 248.1 423 34.5
Nn2g13216 Nelumbo nucifera HOM05D006841 ORTHO05D008607 3.7e-62 243.4 211 61.6
Pp3c12_8330 Physcomitrium patens HOM05D006841 ORTHO05D008607 1.1e-61 241.9 427 33.7
Cpa.g.sc2.394 Carica papaya HOM05D006841 ORTHO05D008607 1.0e-56 225.3 155 73.5
MD11G1194000 Malus domestica HOM05D006841 ORTHO05D008607 7.6e-52 209.1 161 67.7
Oeu034210.1 Olea europaea HOM05D009051 ORTHO05D000140 1.3e-43 181.8 178 49.4
AagrBONN_evm.TU.Sc2ySwM_117.787 Anthoceros agrestis HOM05D006841 ORTHO05D008607 8.8e-32 142.5 225 37.3
Oeu034514.1 Olea europaea HOM05D006841 ORTHO05D008607 7.0e-29 132.9 131 56.5
Oeu034517.1 Olea europaea HOM05D006841 ORTHO05D008607 2.0e-28 131.3 230 35.2
Oeu034513.1 Olea europaea HOM05D006841 ORTHO05D008607 1.0e-27 129.0 230 36.1
Oeu034518.1 Olea europaea HOM05D006841 ORTHO05D008607 2.2e-27 127.9 130 56.2
VMungo0331G0799 Vigna mungo HOM05D000172 ORTHO05D004529 2.0e-20 104.8 146 43.2
Oeu019495.1 Olea europaea HOM05D006841 ORTHO05D008607 6.6e-11 73.2 145 33.8


User provided reference genes

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