Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT2G28870 Arabidopsis thaliana HOM05D010012 ORTHO05D012171 2.4e-81 305.4 157 100.0
AL4G23400 Arabidopsis lyrata HOM05D010012 ORTHO05D012171 7.9e-64 247.3 162 79.6
CARHR122020 Cardamine hirsuta HOM05D010012 ORTHO05D012171 1.3e-58 229.9 160 76.9
Carub.0004s0986 Capsella rubella HOM05D010012 ORTHO05D012171 1.4e-52 209.9 161 73.9
Thhalv10017378m.g Eutrema salsugineum HOM05D010012 ORTHO05D012171 8.5e-50 200.7 160 71.2
Sp4g11680 Schrenkiella parvula HOM05D010012 ORTHO05D012171 4.2e-41 171.8 149 63.8
BcaB02g10207 Brassica carinata HOM05D010012 ORTHO05D012171 2.3e-39 166.0 146 63.7
A07p19320 Brassica napus HOM05D010012 ORTHO05D012171 2.2e-37 159.5 157 59.2
BraA07t29637Z Brassica rapa HOM05D010012 ORTHO05D012171 2.2e-37 159.5 157 59.2
BcaC01g04994 Brassica carinata HOM05D010012 ORTHO05D012171 2.8e-37 159.1 157 58.0
C03p31310 Brassica napus HOM05D010012 ORTHO05D012171 2.8e-37 159.1 157 58.0
BolC3t15480H Brassica oleracea HOM05D010012 ORTHO05D012171 2.8e-37 159.1 157 58.0
A03p26230 Brassica napus HOM05D010012 ORTHO05D012171 4.8e-37 158.3 157 58.0
BraA03t11837Z Brassica rapa HOM05D010012 ORTHO05D012171 6.3e-37 157.9 157 58.0
BcaB06g28260 Brassica carinata HOM05D010012 ORTHO05D012171 1.8e-36 156.4 157 59.2
A04p21920 Brassica napus HOM05D010012 ORTHO05D012171 9.1e-36 154.1 157 59.9
BcaC02g08129 Brassica carinata HOM05D010012 ORTHO05D012171 2.0e-35 152.9 158 60.1
C04p58060 Brassica napus HOM05D010012 ORTHO05D012171 2.0e-35 152.9 158 60.1
BolC4t27332H Brassica oleracea HOM05D010012 ORTHO05D012171 2.0e-35 152.9 158 60.1
BcaB01g03127 Brassica carinata HOM05D010012 ORTHO05D012171 2.5e-33 146.0 157 54.1
BcaC02g11018 Brassica carinata HOM05D010012 ORTHO05D012171 3.6e-32 142.1 157 56.1
C04p22150 Brassica napus HOM05D010012 ORTHO05D012171 3.6e-32 142.1 157 56.1
BolC4t23735H Brassica oleracea HOM05D010012 ORTHO05D012171 3.6e-32 142.1 157 56.1
THA.LOC104800655 Tarenaya hassleriana HOM05D010012 ORTHO05D012171 1.3e-13 80.5 168 39.9
Dinv16991 Davidia involucrata HOM05D005967 ORTHO05D005174 9.5e-09 64.3 158 32.9
Dinv42940 Davidia involucrata HOM05D005967 ORTHO05D005174 9.5e-09 64.3 158 32.9
Dinv43160 Davidia involucrata HOM05D005967 ORTHO05D005174 9.5e-09 64.3 158 32.9
Manes.11G131200 Manihot esculenta HOM05D005967 ORTHO05D005174 5.2e-07 58.5 179 31.3
DCAR_005325 Daucus carota HOM05D005967 ORTHO05D005174 1.5e-06 57.0 130 35.4
Duzib150G1094 Durio zibethinus HOM05D005967 ORTHO05D005174 2.6e-06 56.2 173 30.6
COL.COLO4_18500 Corchorus olitorius HOM05D005967 ORTHO05D005174 3.4e-06 55.8 75 48.0
Manes.04G034400 Manihot esculenta HOM05D005967 ORTHO05D005174 5.8e-06 55.1 166 31.3
Duzib168G1635 Durio zibethinus HOM05D005967 ORTHO05D005174 7.5e-06 54.7 171 31.6
TWI31G0692 Tripterygium wilfordii HOM05D005967 ORTHO05D005174 9.8e-06 54.3 72 41.7


User provided reference genes

Program Settings