Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT2G28440 Arabidopsis thaliana HOM05D011190 ORTHO05D013686 7.2e-49 198.4 269 100.0
AL4G21580 Arabidopsis lyrata HOM05D011190 ORTHO05D013686 1.2e-30 137.9 76 92.1
Thhalv10017667m.g Eutrema salsugineum HOM05D011190 ORTHO05D013686 3.4e-22 109.8 76 76.3
Sp4g11260 Schrenkiella parvula HOM05D011190 ORTHO05D013686 5.7e-22 109.0 77 76.6
CARHR121400 Cardamine hirsuta HOM05D011190 ORTHO05D013686 2.2e-21 107.1 76 72.4
BcaNung07071 Brassica carinata HOM05D011190 ORTHO05D013686 1.1e-17 94.7 72 66.7
C04p22940 Brassica napus HOM05D011190 ORTHO05D013686 1.5e-17 94.4 74 64.9
BolC4t23788H Brassica oleracea HOM05D011190 ORTHO05D013686 1.5e-17 94.4 74 64.9
A04p21570 Brassica napus HOM05D011190 ORTHO05D013686 2.5e-17 93.6 70 75.7
BcaB06g28215 Brassica carinata HOM05D011190 ORTHO05D013686 4.3e-17 92.8 70 71.4
BolC4t27286H Brassica oleracea HOM05D011190 ORTHO05D013686 4.3e-17 92.8 70 75.7
BcaC02g08169 Brassica carinata HOM05D011190 ORTHO05D013686 7.3e-17 92.0 70 74.3
C04p57660 Brassica napus HOM05D011190 ORTHO05D013686 7.3e-17 92.0 70 74.3
BraA04t17722Z Brassica rapa HOM05D011190 ORTHO05D013686 7.3e-17 92.0 70 74.3
BraA07t29606Z Brassica rapa HOM05D011190 ORTHO05D013686 1.2e-16 91.3 76 64.5
Aa31LG5G7780 Aethionema arabicum HOM05D011190 ORTHO05D013686 2.1e-16 90.5 70 67.1
Manes.04G021600 Manihot esculenta HOM05D004188 ORTHO05D004445 1.2e-08 64.7 61 52.5
PSO063G5002 Papaver somniferum HOM05D011190 ORTHO05D004445 1.2e-08 64.7 73 50.7
PSO339G4510 Papaver somniferum HOM05D011190 ORTHO05D004445 1.2e-08 64.7 73 50.7
MBI07_g19312_MAGBIO Magnolia biondii HOM05D004188 ORTHO05D004445 2.8e-08 63.5 72 45.8
Phvul.011G078900 Phaseolus vulgaris HOM05D004188 ORTHO05D004445 8.1e-08 62.0 65 50.8
VMungo1127G1131 Vigna mungo HOM05D000847 ORTHO05D003278 1.4e-07 61.2 69 46.4
MELO3C026856.2 Cucumis melo HOM05D004188 ORTHO05D004445 2.3e-07 60.5 72 45.8
Gohir.D03G134100 Gossypium hirsutum HOM05D004188 ORTHO05D004445 2.3e-07 60.5 72 44.4
PGSC0003DMG400008124 Solanum tuberosum HOM05D004188 ORTHO05D004445 2.3e-07 60.5 74 43.2
Glyma.12G067800 Glycine max HOM05D004188 ORTHO05D004445 3.1e-07 60.1 59 47.5
Gorai.003G141200 Gossypium raimondii HOM05D004188 ORTHO05D004445 3.1e-07 60.1 72 44.4
Cfa011320 Carpinus fangiana HOM05D004188 ORTHO05D004445 4.0e-07 59.7 58 50.0
Ciclev10029471m.g Citrus clementina HOM05D004188 ORTHO05D004445 4.0e-07 59.7 70 42.9
Cc01_g11150 Coffea canephora HOM05D004188 ORTHO05D004445 4.0e-07 59.7 72 48.6
Glyma.11G146900 Glycine max HOM05D004188 ORTHO05D004445 4.0e-07 59.7 50 56.0
Lj3g0014225 Lotus japonicus HOM05D004188 ORTHO05D004445 4.0e-07 59.7 76 44.7
CsaV3_1G012810 Cucumis sativus L. HOM05D004188 ORTHO05D004445 5.2e-07 59.3 72 45.8
RcHm_v2.0_Chr5g0059401 Rosa chinensis HOM05D004188 ORTHO05D004445 1.2e-06 58.2 72 44.4
TWI75G1406 Tripterygium wilfordii HOM05D004188 ORTHO05D004445 1.2e-06 58.2 59 49.2
Gohir.A03G034200 Gossypium hirsutum HOM05D004188 ORTHO05D004445 2.0e-06 57.4 72 43.1
PGR102G1665 Punica granatum HOM05D004188 ORTHO05D004445 2.0e-06 57.4 59 47.5
Lalb_Chr03g0027321 Lupinus albus HOM05D004188 ORTHO05D004445 3.4e-06 56.6 71 47.9
Ca_05256_v3 Cicer arietinum L. HOM05D004188 ORTHO05D004445 4.4e-06 56.2 56 48.2
ClCG03G002160 Citrullus lanatus HOM05D004188 ORTHO05D004445 4.4e-06 56.2 72 43.1
Manes.11G144800 Manihot esculenta HOM05D004188 ORTHO05D004445 4.4e-06 56.2 61 47.5
TPR.G15542 Trifolium pratense HOM05D004188 ORTHO05D004445 5.8e-06 55.8 57 47.4
CAN.G631.25 Capsicum annuum HOM05D004188 ORTHO05D004445 7.5e-06 55.5 73 42.5
Glyma.12G172900 Glycine max HOM05D004188 ORTHO05D004445 7.5e-06 55.5 70 44.3
Mapoly0127s0007 Marchantia polymorpha HOM05D004188 ORTHO05D004445 7.5e-06 55.5 66 51.5
Sed0026517 Sechium edule HOM05D004188 ORTHO05D004445 9.9e-06 55.1 71 45.1


User provided reference genes

Program Settings