Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT2G28130 Arabidopsis thaliana HOM05D006101 ORTHO05D007422 5.4e-262 907.1 459 100.0
AL4G22020 Arabidopsis lyrata HOM05D006101 ORTHO05D007422 1.5e-227 792.7 459 89.1
Carub.0004s0893 Capsella rubella HOM05D006101 ORTHO05D007422 3.6e-218 761.5 460 83.5
Sp4g10940 Schrenkiella parvula HOM05D006101 ORTHO05D007422 1.0e-204 716.8 457 79.0
CARHR120970 Cardamine hirsuta HOM05D006101 ORTHO05D007422 1.8e-201 706.1 461 78.7
BcaB02g10150 Brassica carinata HOM05D006101 ORTHO05D007422 2.9e-199 698.7 459 76.9
BcaC02g10947 Brassica carinata HOM05D006101 ORTHO05D007422 5.5e-198 694.5 460 76.5
C04p23380 Brassica napus HOM05D006101 ORTHO05D007422 2.4e-193 679.1 460 75.7
BolC4t23840H Brassica oleracea HOM05D006101 ORTHO05D007422 3.4e-192 675.2 460 75.2
Aa31LG5G8010 Aethionema arabicum HOM05D006101 ORTHO05D007422 2.2e-191 672.5 459 73.6
A07p18660 Brassica napus HOM05D006101 ORTHO05D007422 1.3e-188 663.3 472 72.7
Thhalv10016576m.g Eutrema salsugineum HOM05D006101 ORTHO05D007422 2.3e-188 662.5 471 73.0
BraA07t29579Z Brassica rapa HOM05D006101 ORTHO05D007422 8.7e-188 660.6 461 74.0
THA.LOC104800579 Tarenaya hassleriana HOM05D006101 ORTHO05D007422 3.6e-173 612.1 460 65.7
GSVIVG01031479001 Vitis vinifera HOM05D006101 ORTHO05D007422 1.3e-143 513.8 456 55.7
TAR636G3121 Trochodendron aralioides HOM05D006101 ORTHO05D007422 3.8e-143 512.3 467 54.6
Thecc.09G350300 Theobroma cacao HOM05D006101 ORTHO05D007422 5.2e-140 501.9 461 54.2
CSS0020443 Camellia sinensis var. sinensis HOM05D006101 ORTHO05D007422 1.2e-139 500.7 460 55.2
Dinv16214 Davidia involucrata HOM05D006101 ORTHO05D007422 1.2e-139 500.7 461 54.9
TWI75G1238 Tripterygium wilfordii HOM05D006101 ORTHO05D007422 3.7e-138 495.7 453 53.9
ClCG03G002470 Citrullus lanatus HOM05D006101 ORTHO05D007422 4.1e-137 492.3 454 52.4
Atru.chr3.3528 Acer truncatum HOM05D006101 ORTHO05D007422 5.4e-137 491.9 453 54.3
QL01p015279 Quercus lobata HOM05D006101 ORTHO05D007422 9.2e-137 491.1 455 54.3
Manes.04G013700 Manihot esculenta HOM05D006101 ORTHO05D007422 1.6e-136 490.3 461 51.6
CiPaw.13G123600 Carya illinoinensis HOM05D006101 ORTHO05D007422 2.7e-136 489.6 453 53.6
CsaV3_1G013150 Cucumis sativus L. HOM05D006101 ORTHO05D007422 5.0e-135 485.3 454 52.0
Sed0008610 Sechium edule HOM05D006101 ORTHO05D007422 1.6e-133 480.3 451 52.3
Cfa010291 Carpinus fangiana HOM05D006101 ORTHO05D007422 4.7e-133 478.8 454 53.3
Prupe.6G111800 Prunus persica HOM05D006101 ORTHO05D007422 2.3e-132 476.5 458 52.0
MD11G1147300 Malus domestica HOM05D006101 ORTHO05D007422 1.3e-130 470.7 452 52.4
Potri.009G006200 Populus trichocarpa HOM05D006101 ORTHO05D007422 1.3e-130 470.7 459 51.9
Haze_23705 Corylus avellana HOM05D006101 ORTHO05D007422 1.1e-129 467.6 454 53.3
Duzib150G0708 Durio zibethinus HOM05D006101 ORTHO05D007422 5.4e-129 465.3 461 52.3
PGSC0003DMG400000413 Solanum tuberosum HOM05D006101 ORTHO05D007422 3.9e-127 459.1 456 51.8
Gohir.A03G029500 Gossypium hirsutum HOM05D006101 ORTHO05D007422 8.6e-127 458.0 463 51.4
COL.COLO4_11107 Corchorus olitorius HOM05D006101 ORTHO05D007422 1.5e-126 457.2 461 52.1
CAN.G546.34 Capsicum annuum HOM05D006101 ORTHO05D007422 1.9e-126 456.8 462 51.5
CSS0026133 Camellia sinensis var. sinensis HOM05D006101 ORTHO05D007422 2.5e-126 456.4 410 55.4
Gohir.D03G139000 Gossypium hirsutum HOM05D006101 ORTHO05D007422 2.5e-126 456.4 463 51.4
Actinidia03696 Actinidia chinensis HOM05D006101 ORTHO05D007422 5.6e-126 455.3 465 52.7
Solyc11g066340.2 Solanum lycopersicum HOM05D006101 ORTHO05D007422 7.3e-126 454.9 457 50.8
RcHm_v2.0_Chr5g0056961 Rosa chinensis HOM05D006101 ORTHO05D007422 9.5e-126 454.5 458 50.7
Cc01_g10370 Coffea canephora HOM05D006101 ORTHO05D007422 2.8e-125 453.0 466 50.0
Sopen11g026080 Solanum pennellii HOM05D006101 ORTHO05D007422 3.6e-125 452.6 457 50.5
FvH4_3g30770 Fragaria vesca HOM05D006101 ORTHO05D007422 4.7e-125 452.2 457 50.8
Gorai.003G145800 Gossypium raimondii HOM05D006101 ORTHO05D007422 4.7e-125 452.2 463 51.2
Hma1.2p1_0051F.1_g029390 Hydrangea macrophylla HOM05D006101 ORTHO05D007422 1.2e-123 447.6 438 51.6
FAN16G0923 Fragaria x ananassa HOM05D006101 ORTHO05D007422 1.5e-123 447.2 455 49.7
Lsat_1_v5_gn_6_44300 Lactuca sativa HOM05D006101 ORTHO05D007422 1.5e-123 447.2 453 49.4
FAN11G1700 Fragaria x ananassa HOM05D002446 ORTHO05D007422 7.5e-123 444.9 459 50.3
MELO3C004994.2 Cucumis melo HOM05D006101 ORTHO05D007422 9.9e-123 444.5 500 47.0
FAN21G1086 Fragaria x ananassa HOM05D006101 ORTHO05D007422 3.7e-122 442.6 455 50.3
Lalb_Chr19g0136961 Lupinus albus HOM05D006101 ORTHO05D007422 3.7e-122 442.6 456 49.1
Phvul.011G085500 Phaseolus vulgaris HOM05D006101 ORTHO05D007422 3.2e-121 439.5 454 48.5
Lj2C1009G5 Lonicera japonica HOM05D006101 ORTHO05D007422 4.1e-121 439.1 500 46.8
Eucgr.B03934 Eucalyptus grandis HOM05D006101 ORTHO05D007422 2.7e-120 436.4 450 52.4
FAN25G1259 Fragaria x ananassa HOM05D006101 ORTHO05D007422 6.0e-120 435.3 459 49.7
Ciclev10028403m.g Citrus clementina HOM05D006101 ORTHO05D007422 1.3e-119 434.1 459 47.7
Nitab4.5_0000329g0130 Nicotiana tabacum HOM05D006101 ORTHO05D007422 6.6e-119 431.8 446 49.6
PGR102G2892 Punica granatum HOM05D006101 ORTHO05D007422 6.6e-119 431.8 452 49.1
CANSAT56G2622 Cannabis sativa HOM05D006101 ORTHO05D007422 1.5e-118 430.6 443 49.7
HanXRQChr13g0396251 Helianthus annuus HOM05D006101 ORTHO05D007422 4.3e-118 429.1 454 47.8
MSTRG.21091 Avicennia marina HOM05D006101 ORTHO05D007422 2.8e-117 426.4 457 49.2
Peaxi162Scf00086g01114 Petunia axillaris HOM05D006101 ORTHO05D007422 3.6e-117 426.0 444 49.3
Lj3g0002990 Lotus japonicus HOM05D006101 ORTHO05D007422 2.6e-115 419.9 456 48.0
Glyma.11G193400 Glycine max HOM05D006101 ORTHO05D007422 7.6e-115 418.3 456 47.6
Ca_30122_v3 Cicer arietinum L. HOM05D006101 ORTHO05D007422 1.3e-114 417.5 452 48.2
Aqoxy1G01111 Aquilegia oxysepala HOM05D006101 ORTHO05D007422 1.1e-113 414.5 464 47.6
VMungo1127G1509 Vigna mungo HOM05D006101 ORTHO05D007422 1.4e-113 414.1 456 46.3
Migut.D02287 Erythranthe guttata HOM05D006101 ORTHO05D007422 1.2e-112 411.0 460 46.3
Psat0s1387g0080 Pisum sativum HOM05D006101 ORTHO05D007422 8.6e-111 404.8 455 47.3
Ca_02469_v3 Cicer arietinum L. HOM05D006101 ORTHO05D007422 3.3e-110 402.9 455 46.6
Medtr4g057493 Medicago truncatula HOM05D006101 ORTHO05D007422 4.3e-110 402.5 454 46.5
Rhsim01G0211100 Rhododendron simsii HOM05D006101 ORTHO05D007422 4.4e-107 392.5 460 46.3
Oeu007313.2 Olea europaea HOM05D006101 ORTHO05D007422 9.9e-107 391.3 497 43.5
SalBow4G3219 Salvia bowleyana HOM05D006101 ORTHO05D007422 3.8e-106 389.4 460 45.2
Sc06g0010850 Simmondsia chinensis HOM05D006101 ORTHO05D007422 8.4e-106 388.3 458 46.3
PSO339G3309 Papaver somniferum HOM05D006101 ORTHO05D007422 3.2e-105 386.3 474 46.0
PSO063G0796 Papaver somniferum HOM05D006101 ORTHO05D007422 1.2e-104 384.4 474 46.0
CDE09G0605 Ceratophyllum demersum HOM05D006101 ORTHO05D007422 2.7e-104 383.3 455 44.8
EL10Ac9g22610 Beta vulgaris HOM05D006101 ORTHO05D007422 7.8e-104 381.7 474 44.5
Sabra09G0003500 Salix brachista HOM05D006101 ORTHO05D007422 7.8e-104 381.7 382 49.7
Nn2g13844 Nelumbo nucifera HOM05D006101 ORTHO05D007422 3.3e-102 376.3 401 48.4
ATR0088G017 Amborella trichopoda HOM05D006101 ORTHO05D007422 2.1e-101 373.6 444 43.9
SGA_v2.0_scaffold27G11561 Striga asiatica HOM05D006101 ORTHO05D007422 2.1e-101 373.6 461 43.8
MBI13_g39328_MAGBIO Magnolia biondii HOM05D006101 ORTHO05D007422 1.8e-100 370.5 554 39.9
ECA233G2185 Erigeron canadensis HOM05D006101 ORTHO05D007422 3.4e-99 366.3 459 42.7
vmacro14396 Vaccinium macrocarpon HOM05D006101 ORTHO05D007422 1.0e-95 354.8 447 44.5
Dinv29372 Davidia involucrata HOM05D006101 ORTHO05D007422 4.0e-92 342.8 329 51.1
Os01g0241100 Oryza sativa ssp. japonica HOM05D006101 ORTHO05D007422 4.5e-91 339.3 459 43.1
AUR62029180 Chenopodium quinoa HOM05D006101 ORTHO05D007422 1.4e-89 334.3 456 41.0
DCAR_018770 Daucus carota HOM05D006101 ORTHO05D007422 4.8e-85 319.3 365 47.1
HPP92_020176 Vanilla planifolia HOM05D006101 ORTHO05D007422 1.8e-84 317.4 459 40.7
Nitab4.5_0003880g0040 Nicotiana tabacum HOM05D006101 ORTHO05D007422 1.3e-79 301.2 458 40.8
unitig_747.g21973 Utricularia gibba HOM05D006101 ORTHO05D007422 1.0e-74 285.0 335 44.2
Glyma.12G080600 Glycine max HOM05D006101 ORTHO05D007422 5.0e-74 282.7 415 38.8
Ah.01g014140 Amaranthus hybridus HOM05D006101 ORTHO05D007422 9.3e-73 278.5 484 37.0
Hund08365 Selenicereus undatus HOM05D006101 ORTHO05D007422 2.1e-72 277.3 457 36.5
arahy.Tifrunner.gnm1.ann1.P58SHS Arachis hypogaea HOM05D006101 ORTHO05D007422 3.6e-72 276.6 471 35.2
arahy.Tifrunner.gnm1.ann1.V5BWPF Arachis hypogaea HOM05D006101 ORTHO05D007422 1.9e-70 270.8 465 35.3
arahy.Tifrunner.gnm1.ann1.66BK9V Arachis hypogaea HOM05D006101 ORTHO05D007422 1.7e-69 267.7 445 36.2
AUR62014957 Chenopodium quinoa HOM05D006101 ORTHO05D007422 6.1e-64 249.2 374 37.2
Hma1.2p1_0051F.1_g029400 Hydrangea macrophylla HOM05D006101 ORTHO05D007422 5.7e-62 242.7 219 54.8
Zm00001eb118850 Zea mays HOM05D006101 ORTHO05D007422 4.5e-59 233.0 346 39.6
HanXRQChr04g0111151 Helianthus annuus HOM05D006101 ORTHO05D007422 6.3e-53 212.6 300 39.7
SHI06228 Sapria himalayana HOM05D006101 ORTHO05D007422 1.2e-43 181.8 200 45.0
VMungo1215G2511 Vigna mungo HOM05D006101 ORTHO05D007422 5.5e-41 172.9 315 33.7
Pp3c4_7040 Physcomitrium patens HOM05D006101 ORTHO05D007422 3.4e-38 163.7 455 28.1
arahy.Tifrunner.gnm1.ann1.KM9ELV Arachis hypogaea HOM05D006101 ORTHO05D007422 9.5e-33 145.6 271 32.8
Mapoly0094s0062 Marchantia polymorpha HOM05D006101 ORTHO05D007422 4.9e-29 133.3 456 25.2
SEGI_30921 Sequoiadendron giganteum HOM05D006101 ORTHO05D007422 2.3e-26 124.4 217 31.3
Actinidia20431 Actinidia chinensis HOM05D006101 ORTHO05D007422 1.6e-24 118.2 112 53.6
arahy.Tifrunner.gnm1.ann1.PH2QKZ Arachis hypogaea HOM05D006101 ORTHO05D007422 3.4e-22 110.5 234 31.6
SEGI_35146 Sequoiadendron giganteum HOM05D006101 ORTHO05D007422 3.7e-21 107.1 143 40.6
SHI06230 Sapria himalayana HOM05D006101 ORTHO05D007422 7.8e-19 99.4 138 39.9
TPR.G36765 Trifolium pratense HOM05D006101 ORTHO05D007422 9.5e-17 92.4 83 53.0
arahy.Tifrunner.gnm1.ann1.EU9JMW Arachis hypogaea HOM05D006101 ORTHO05D007422 2.8e-16 90.9 174 35.1
arahy.Tifrunner.gnm1.ann1.88XJ4T Arachis hypogaea HOM05D006101 ORTHO05D007422 2.6e-14 84.3 109 36.7
AagrBONN_evm.TU.Sc2ySwM_228.2481 Anthoceros agrestis HOM05D006101 ORTHO05D007422 4.9e-13 80.1 437 23.3
SMO351G0356 Selaginella moellendorffii HOM05D006101 ORTHO05D007422 1.4e-12 78.6 317 23.3
Glyma.09G075800 Glycine max HOM05D006101 ORTHO05D007422 3.1e-07 60.8 57 52.6


User provided reference genes

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