Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT2G27775 Arabidopsis thaliana HOM05D008128 ORTHO05D010259 1.9e-47 192.2 101 100.0
AL4G22520 Arabidopsis lyrata HOM05D008128 ORTHO05D010259 3.2e-42 174.9 101 90.1
CARHR120480 Cardamine hirsuta HOM05D008128 ORTHO05D010259 2.8e-38 161.8 101 86.1
Carub.0004s0853 Capsella rubella HOM05D008128 ORTHO05D010259 2.6e-36 155.2 101 84.2
Aa31LG5G8220 Aethionema arabicum HOM05D008128 ORTHO05D010259 1.5e-28 129.4 105 72.4
Thhalv10017465m.g Eutrema salsugineum HOM05D008128 ORTHO05D010259 1.0e-27 126.7 106 72.6
A07p18370 Brassica napus HOM05D008128 ORTHO05D010259 5.5e-26 120.9 102 67.6
Sp4g10610 Schrenkiella parvula HOM05D008128 ORTHO05D010259 5.5e-26 120.9 107 70.1
BraA07t29553Z Brassica rapa HOM05D008128 ORTHO05D010259 2.7e-25 118.6 102 66.7
BolC4t23880H Brassica oleracea HOM05D008128 ORTHO05D010259 5.1e-24 114.4 103 67.0
THA.LOC104826404 Tarenaya hassleriana HOM05D008128 ORTHO05D010259 1.5e-23 112.8 102 67.6
Carub.0004s0854 Capsella rubella HOM05D007402 ORTHO05D003673 5.7e-23 110.9 85 74.1
C04p23830 Brassica napus HOM05D008128 ORTHO05D010259 7.4e-23 110.5 103 65.0
BcaB02g10115 Brassica carinata HOM05D008128 ORTHO05D010259 1.7e-22 109.4 104 63.5
BcaC02g10905 Brassica carinata HOM05D008128 ORTHO05D010259 4.8e-22 107.8 103 65.0
C04p56930 Brassica napus HOM05D008128 ORTHO05D010259 3.1e-21 105.1 103 67.0
BcaB06g28169 Brassica carinata HOM05D008128 ORTHO05D010259 2.6e-20 102.1 103 67.0
BcaC02g08229 Brassica carinata HOM05D008128 ORTHO05D010259 4.2e-18 94.7 103 61.2
A04p21130 Brassica napus HOM05D008128 ORTHO05D010259 2.1e-17 92.4 102 57.8
Aa31LG5G8210 Aethionema arabicum HOM05D005584 ORTHO05D006809 7.9e-17 90.5 99 58.6
BolC4t27230H Brassica oleracea HOM05D008128 ORTHO05D010259 1.1e-15 86.7 93 64.5
Manes.04G008100 Manihot esculenta HOM05D008128 ORTHO05D010259 3.7e-14 81.6 106 54.7
Gorai.009G088100 Gossypium raimondii HOM05D008128 ORTHO05D010259 1.4e-13 79.7 101 53.5
Duzib168G2012 Durio zibethinus HOM05D008128 ORTHO05D010259 1.8e-13 79.3 101 54.5
Duzib170G0339 Durio zibethinus HOM05D008128 ORTHO05D010259 2.4e-13 79.0 104 53.8
TWI31G0843 Tripterygium wilfordii HOM05D008128 ORTHO05D010259 2.4e-13 79.0 107 48.6
Thecc.09G290900 Theobroma cacao HOM05D008128 ORTHO05D010259 3.1e-13 78.6 102 54.9
Gohir.D05G086500 Gossypium hirsutum HOM05D008128 ORTHO05D010259 4.1e-13 78.2 101 52.5
MD11G1158100 Malus domestica HOM05D008128 ORTHO05D010259 4.1e-13 78.2 98 53.1
CANSAT54G0355 Cannabis sativa HOM05D008128 ORTHO05D010259 5.3e-13 77.8 102 53.9
Gohir.A05G083600 Gossypium hirsutum HOM05D008128 ORTHO05D010259 1.2e-12 76.6 101 51.5
Gohir.A07G107600 Gossypium hirsutum HOM05D008128 ORTHO05D010259 1.6e-12 76.3 100 54.0
Prupe.6G119900 Prunus persica HOM05D008128 ORTHO05D010259 2.6e-12 75.5 96 53.1
Manes.11G157800 Manihot esculenta HOM05D008128 ORTHO05D010259 3.5e-12 75.1 109 51.4
BraA04t17682Z Brassica rapa HOM05D008128 ORTHO05D010259 5.9e-12 74.3 92 54.3
MD03G1135500 Malus domestica HOM05D008128 ORTHO05D010259 1.0e-11 73.6 98 50.0
CiPaw.05G064900 Carya illinoinensis HOM05D008128 ORTHO05D010259 1.7e-11 72.8 104 51.0
Potri.009G148400 Populus trichocarpa HOM05D008128 ORTHO05D010259 1.5e-10 69.7 94 52.1
Dinv29430 Davidia involucrata HOM05D008128 ORTHO05D010259 1.9e-10 69.3 100 47.0
Nn6g35034 Nelumbo nucifera HOM05D008128 ORTHO05D010259 2.5e-10 68.9 98 50.0
PSO170G0300 Papaver somniferum HOM05D008128 ORTHO05D010259 5.5e-10 67.8 105 48.6
THA.LOC104800555 Tarenaya hassleriana HOM05D007402 ORTHO05D003673 5.5e-10 67.8 88 50.0
CiPaw.14G103200 Carya illinoinensis HOM05D008128 ORTHO05D010259 1.2e-09 66.6 67 58.2
FAN25G2677 Fragaria x ananassa HOM05D008128 ORTHO05D010259 1.2e-09 66.6 92 47.8
GSVIVG01031392001 Vitis vinifera HOM05D008128 ORTHO05D010259 1.2e-09 66.6 107 48.6
FAN25G1097 Fragaria x ananassa HOM05D008128 ORTHO05D010259 1.6e-09 66.2 92 47.8
CiPaw.13G140600 Carya illinoinensis HOM05D008128 ORTHO05D010259 2.1e-09 65.9 102 49.0
PSO443G0067 Papaver somniferum HOM05D008128 ORTHO05D010259 2.1e-09 65.9 111 45.9
RcHm_v2.0_Chr5g0043301 Rosa chinensis HOM05D008128 ORTHO05D010259 4.7e-09 64.7 98 50.0
FvH4_3g24190 Fragaria vesca HOM05D008128 ORTHO05D010259 6.1e-09 64.3 92 47.8
Cfa010077 Carpinus fangiana HOM05D008128 ORTHO05D010259 8.0e-09 63.9 87 48.3
Dinv21251 Davidia involucrata HOM05D008128 ORTHO05D010259 1.4e-08 63.2 105 46.7
PSO384G2376 Papaver somniferum HOM05D008128 ORTHO05D010259 1.8e-08 62.8 107 45.8
Gorai.001G119900 Gossypium raimondii HOM05D008128 ORTHO05D010259 2.3e-08 62.4 100 49.0
PSO210G6229 Papaver somniferum HOM05D008128 ORTHO05D010259 4.0e-08 61.6 105 47.6
Actinidia08433 Actinidia chinensis HOM05D008128 ORTHO05D010259 8.8e-08 60.5 106 47.2
AT2G27800 Arabidopsis thaliana HOM05D007402 ORTHO05D003673 8.8e-08 60.5 95 45.3
AL4G22480 Arabidopsis lyrata HOM05D007402 ORTHO05D003673 5.7e-07 57.8 72 55.6


User provided reference genes

Program Settings