Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT2G27590 Arabidopsis thaliana HOM05D006704 ORTHO05D008635 1.7e-210 735.7 373 100.0
AL4G22810 Arabidopsis lyrata HOM05D006704 ORTHO05D008635 8.4e-205 716.8 375 96.3
Carub.0004s0825 Capsella rubella HOM05D006704 ORTHO05D008635 3.6e-192 674.9 376 89.4
Sp4g10410 Schrenkiella parvula HOM05D006704 ORTHO05D008635 9.9e-190 666.8 376 89.6
Thhalv10016700m.g Eutrema salsugineum HOM05D006704 ORTHO05D008635 2.2e-189 665.6 375 91.5
CARHR121470 Cardamine hirsuta HOM05D006704 ORTHO05D008635 3.8e-189 664.8 378 90.5
BraA04t17672Z Brassica rapa HOM05D006704 ORTHO05D008635 2.6e-182 642.1 375 88.3
A04p21040 Brassica napus HOM05D006704 ORTHO05D008635 4.5e-182 641.3 375 88.0
C04p56860 Brassica napus HOM05D006704 ORTHO05D008635 4.9e-181 637.9 373 85.3
BcaB06g28156 Brassica carinata HOM05D006704 ORTHO05D008635 1.4e-180 636.3 376 87.2
BolC4t27219H Brassica oleracea HOM05D006704 ORTHO05D008635 2.4e-180 635.6 373 84.2
BcaC02g08239 Brassica carinata HOM05D006704 ORTHO05D008635 4.2e-180 634.8 373 85.0
Aa31LG5G8320 Aethionema arabicum HOM05D006704 ORTHO05D008635 7.9e-179 630.6 378 83.6
THA.LOC104800539 Tarenaya hassleriana HOM05D006704 ORTHO05D008635 5.7e-161 571.2 398 72.1
COL.COLO4_19912 Corchorus olitorius HOM05D006704 ORTHO05D008635 1.4e-143 513.5 390 69.5
Thecc.09G286000 Theobroma cacao HOM05D006704 ORTHO05D008635 1.9e-140 503.1 330 71.8
Duzib170G0143 Durio zibethinus HOM05D006704 ORTHO05D008635 5.2e-138 495.0 395 65.6
Ciclev10028571m.g Citrus clementina HOM05D006704 ORTHO05D008635 8.8e-138 494.2 333 69.7
TAR633G0569 Trochodendron aralioides HOM05D006704 ORTHO05D008635 3.3e-137 492.3 332 69.0
MD03G1142000 Malus domestica HOM05D006704 ORTHO05D008635 4.4e-137 491.9 390 65.6
RcHm_v2.0_Chr5g0044201 Rosa chinensis HOM05D006704 ORTHO05D008635 5.7e-137 491.5 397 64.7
Gorai.009G086600 Gossypium raimondii HOM05D006704 ORTHO05D008635 7.5e-137 491.1 330 69.7
Manes.11G160500 Manihot esculenta HOM05D006704 ORTHO05D008635 7.5e-137 491.1 329 70.8
FvH4_3g24630 Fragaria vesca HOM05D006704 ORTHO05D008635 1.3e-136 490.3 331 70.1
Glyma.11G184500 Glycine max HOM05D006704 ORTHO05D008635 6.3e-136 488.0 391 63.7
Gohir.A05G081700 Gossypium hirsutum HOM05D006704 ORTHO05D008635 8.2e-136 487.6 330 69.7
Gohir.D05G084700 Gossypium hirsutum HOM05D006704 ORTHO05D008635 2.4e-135 486.1 330 69.4
TPR.G17210 Trifolium pratense HOM05D006704 ORTHO05D008635 2.4e-135 486.1 325 70.8
Lj3g0010910 Lotus japonicus HOM05D006704 ORTHO05D008635 5.3e-135 485.0 388 62.9
TWI31G0547 Tripterygium wilfordii HOM05D006704 ORTHO05D008635 5.3e-135 485.0 329 70.2
Dinv29464 Davidia involucrata HOM05D006704 ORTHO05D008635 7.0e-135 484.6 365 66.6
GSVIVG01036154001 Vitis vinifera HOM05D006704 ORTHO05D008635 9.1e-135 484.2 316 71.2
Medtr4g053410 Medicago truncatula HOM05D006704 ORTHO05D008635 1.6e-134 483.4 388 64.7
Potri.004G184400 Populus trichocarpa HOM05D006704 ORTHO05D008635 2.0e-134 483.0 324 71.3
PGR119G0959 Punica granatum HOM05D006704 ORTHO05D008635 2.7e-134 482.6 388 65.7
Atru.chr3.3296 Acer truncatum HOM05D006704 ORTHO05D008635 3.5e-134 482.3 329 69.3
Glyma.12G087800 Glycine max HOM05D006704 ORTHO05D008635 1.0e-133 480.7 333 67.6
Psat7g188440 Pisum sativum HOM05D006704 ORTHO05D008635 3.8e-133 478.8 331 68.6
vmacro03306 Vaccinium macrocarpon HOM05D006704 ORTHO05D008635 3.8e-133 478.8 325 69.2
VMungo1127G0699 Vigna mungo HOM05D006704 ORTHO05D008635 5.0e-133 478.4 395 60.8
CSS0007169 Camellia sinensis var. sinensis HOM05D006704 ORTHO05D008635 1.1e-132 477.2 333 69.7
CSS0018673 Camellia sinensis var. sinensis HOM05D006704 ORTHO05D008635 1.1e-132 477.2 333 69.7
CANSAT54G0988 Cannabis sativa HOM05D006704 ORTHO05D008635 1.1e-132 477.2 388 64.7
Cfa010042 Carpinus fangiana HOM05D006704 ORTHO05D008635 1.1e-132 477.2 322 71.4
Solyc06g074380.3 Solanum lycopersicum HOM05D006704 ORTHO05D008635 1.1e-132 477.2 317 70.7
Ca_19394_v3 Cicer arietinum L. HOM05D006704 ORTHO05D008635 1.5e-132 476.9 330 68.2
PGSC0003DMG400007144 Solanum tuberosum HOM05D006704 ORTHO05D008635 5.5e-132 474.9 370 63.0
arahy.Tifrunner.gnm1.ann1.GMPU9C Arachis hypogaea HOM05D006704 ORTHO05D008635 9.4e-132 474.2 324 68.2
Lalb_Chr03g0028021 Lupinus albus HOM05D006704 ORTHO05D008635 9.4e-132 474.2 397 62.0
QL01p012560 Quercus lobata HOM05D006704 ORTHO05D008635 9.4e-132 474.2 407 62.4
Sabra04G0124100 Salix brachista HOM05D006704 ORTHO05D008635 9.4e-132 474.2 323 69.7
arahy.Tifrunner.gnm1.ann1.JHI8LQ Arachis hypogaea HOM05D006704 ORTHO05D008635 1.6e-131 473.4 324 68.2
Sopen06g030840 Solanum pennellii HOM05D006704 ORTHO05D008635 1.6e-131 473.4 317 70.3
Rhsim13G0110100 Rhododendron simsii HOM05D006704 ORTHO05D008635 3.0e-130 469.2 334 66.2
SalBow6G4963 Salvia bowleyana HOM05D006704 ORTHO05D008635 3.0e-130 469.2 389 63.0
AUR62039223 Chenopodium quinoa HOM05D006704 ORTHO05D008635 5.2e-130 468.4 321 69.2
MELO3C004818.2 Cucumis melo HOM05D006704 ORTHO05D008635 1.5e-129 466.8 327 67.9
Aqoxy2G01240 Aquilegia oxysepala HOM05D006704 ORTHO05D008635 2.0e-129 466.5 328 66.2
DCAR_006157 Daucus carota HOM05D006704 ORTHO05D008635 2.0e-129 466.5 383 61.4
FAN11G2081 Fragaria x ananassa HOM05D006704 ORTHO05D008635 2.0e-129 466.5 313 70.3
ClCG01G012900 Citrullus lanatus HOM05D006704 ORTHO05D008635 2.6e-129 466.1 399 63.7
Hma1.2p1_0305F.1_g119670 Hydrangea macrophylla HOM05D006704 ORTHO05D008635 4.4e-129 465.3 320 69.1
Lsat_1_v5_gn_6_40481 Lactuca sativa HOM05D006704 ORTHO05D008635 5.7e-129 464.9 379 60.7
Nn6g34957 Nelumbo nucifera HOM05D006704 ORTHO05D008635 5.7e-129 464.9 389 60.9
Cc01_g09380 Coffea canephora HOM05D006704 ORTHO05D008635 7.5e-129 464.5 325 68.9
Phvul.011G092800 Phaseolus vulgaris HOM05D006704 ORTHO05D008635 7.5e-129 464.5 327 66.1
AUR62009778 Chenopodium quinoa HOM05D006704 ORTHO05D008635 1.3e-128 463.8 382 63.9
EL10Ac7g15806 Beta vulgaris HOM05D006704 ORTHO05D008635 1.7e-128 463.4 391 63.2
CsaV3_1G014420 Cucumis sativus L. HOM05D006704 ORTHO05D008635 1.7e-128 463.4 388 63.4
Sed0027356 Sechium edule HOM05D006704 ORTHO05D008635 2.2e-128 463.0 399 61.2
Migut.D02353 Erythranthe guttata HOM05D006704 ORTHO05D008635 3.7e-128 462.2 320 65.9
SGA_v2.0_scaffold22G09877 Striga asiatica HOM05D006704 ORTHO05D008635 4.8e-128 461.8 321 67.9
HanXRQChr12g0364591 Helianthus annuus HOM05D006704 ORTHO05D008635 8.3e-128 461.1 315 69.5
PSO384G3226 Papaver somniferum HOM05D006704 ORTHO05D008635 8.3e-128 461.1 323 68.4
CAN.G919.21 Capsicum annuum HOM05D006704 ORTHO05D008635 5.4e-127 458.4 374 64.2
FAN21G3586 Fragaria x ananassa HOM05D006704 ORTHO05D008635 5.4e-127 458.4 311 69.1
Nitab4.5_0015718g0010 Nicotiana tabacum HOM05D006704 ORTHO05D008635 1.6e-126 456.8 401 60.3
Nitab4.5_0002002g0020 Nicotiana tabacum HOM05D006704 ORTHO05D008635 3.5e-126 455.7 391 59.6
PSO339G4200 Papaver somniferum HOM05D006704 ORTHO05D008635 3.5e-126 455.7 323 67.8
MSTRG.18751 Avicennia marina HOM05D006704 ORTHO05D008635 1.7e-125 453.4 329 65.3
Eucgr.I00893 Eucalyptus grandis HOM05D006704 ORTHO05D008635 2.9e-125 452.6 393 61.1
ECA233G1041 Erigeron canadensis HOM05D006704 ORTHO05D008635 8.6e-125 451.1 378 60.3
Ah.08g215840 Amaranthus hybridus HOM05D006704 ORTHO05D008635 1.1e-124 450.7 395 59.7
CiPaw.13G137600 Carya illinoinensis HOM05D006704 ORTHO05D008635 1.1e-124 450.7 305 68.5
Nitab4.5_0002002g0030 Nicotiana tabacum HOM05D006704 ORTHO05D008635 1.9e-124 449.9 370 61.9
Hund20877 Selenicereus undatus HOM05D006704 ORTHO05D008635 3.2e-124 449.1 323 66.9
MBI17_g08127_MAGBIO Magnolia biondii HOM05D006704 ORTHO05D008635 1.0e-122 444.1 332 62.0
CDE06G2417 Ceratophyllum demersum HOM05D006704 ORTHO05D008635 5.7e-121 438.3 380 58.4
Peaxi162Scf00091g00118 Petunia axillaris HOM05D006704 ORTHO05D008635 2.8e-120 436.0 317 65.6
Haze_23402 Corylus avellana HOM05D006704 ORTHO05D008635 2.3e-117 426.4 433 52.2
Os01g0858700 Oryza sativa ssp. japonica HOM05D006704 ORTHO05D008635 1.9e-116 423.3 328 60.4
unitig_37.g12893 Utricularia gibba HOM05D006704 ORTHO05D008635 3.3e-116 422.5 316 63.3
Sc12g0004410 Simmondsia chinensis HOM05D006704 ORTHO05D008635 4.3e-116 422.2 291 67.7
HPP92_000003 Vanilla planifolia HOM05D006704 ORTHO05D008635 2.0e-113 413.3 319 63.3
Zm00001eb147310 Zea mays HOM05D006704 ORTHO05D008635 1.7e-112 410.2 321 60.1
Prupe.6G127300 Prunus persica HOM05D006704 ORTHO05D008635 2.4e-111 406.4 276 69.2
Lj2A980T13 Lonicera japonica HOM05D006704 ORTHO05D008635 1.3e-109 400.6 313 61.3
Cpa.g.sc32.105 Carica papaya HOM05D006704 ORTHO05D008635 1.7e-104 383.6 322 64.3
SEGI_32150 Sequoiadendron giganteum HOM05D006704 ORTHO05D008635 7.8e-102 374.8 388 49.2
ATR0820G138 Amborella trichopoda HOM05D006704 ORTHO05D008635 8.6e-101 371.3 304 59.5
AagrBONN_evm.TU.Sc2ySwM_228.5549 Anthoceros agrestis HOM05D006704 ORTHO05D008635 5.6e-100 368.6 382 49.5
Mapoly0047s0027 Marchantia polymorpha HOM05D006704 ORTHO05D008635 2.1e-94 350.1 332 52.7
Actinidia07237 Actinidia chinensis HOM05D006704 ORTHO05D008635 2.7e-94 349.7 336 54.8
FAN16G1713 Fragaria x ananassa HOM05D006704 ORTHO05D008635 7.3e-92 341.7 250 65.2
SMO200G0095 Selaginella moellendorffii HOM05D006704 ORTHO05D008635 1.9e-87 327.0 305 50.2
SMO079G0003 Selaginella moellendorffii HOM05D006704 ORTHO05D008635 2.4e-87 326.6 305 50.5
Hma1.2p1_0305F.1_g119660 Hydrangea macrophylla HOM05D006704 ORTHO05D008635 2.0e-73 280.4 224 61.2
TWI79G0085 Tripterygium wilfordii HOM05D006704 ORTHO05D008635 2.1e-38 164.1 99 69.7
MD03G1142200 Malus domestica HOM05D006704 ORTHO05D008635 2.2e-32 144.1 93 72.0
Oeu031485.1 Olea europaea HOM05D006704 ORTHO05D008635 1.1e-31 141.7 389 31.1
VMungo0464G0466 Vigna mungo HOM05D006704 ORTHO05D000044 3.1e-26 123.6 127 50.4
Cpa.g.sc32.104 Carica papaya HOM05D006704 ORTHO05D008635 3.6e-22 110.2 77 62.3
Actinidia24205 Actinidia chinensis HOM05D006704 ORTHO05D008635 7.5e-20 102.4 65 63.1
Cfa010043 Carpinus fangiana HOM05D006704 ORTHO05D008635 9.1e-18 95.5 49 87.8
Migut.D01870 Erythranthe guttata HOM05D006704 ORTHO05D008635 3.8e-16 90.1 263 25.9
SEGI_14445 Sequoiadendron giganteum HOM05D006704 ORTHO05D008635 7.2e-15 85.9 108 47.2
QL02p006829 Quercus lobata HOM05D006704 ORTHO05D004198 2.4e-10 70.9 48 68.8
MD11G1162700 Malus domestica HOM05D006704 ORTHO05D008635 7.0e-10 69.3 129 33.3


User provided reference genes

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