Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT2G27385 Arabidopsis thaliana HOM05D005110 ORTHO05D006074 2.0e-86 322.4 163 100.0
AL4G21340 Arabidopsis lyrata HOM05D005110 ORTHO05D006074 4.2e-76 288.1 163 89.6
CARHR119990 Cardamine hirsuta HOM05D005110 ORTHO05D006074 5.1e-74 281.2 163 84.7
Thhalv10002110m.g Eutrema salsugineum HOM05D005110 ORTHO05D006074 3.4e-70 268.5 164 82.9
Carub.0004s0802 Capsella rubella HOM05D005110 ORTHO05D006074 1.4e-68 263.1 165 82.4
Sp4g10180 Schrenkiella parvula HOM05D005110 ORTHO05D006074 1.4e-68 263.1 164 79.9
C04p24220 Brassica napus HOM05D005110 ORTHO05D006074 6.7e-66 254.2 164 78.0
BolC4t23920H Brassica oleracea HOM05D005110 ORTHO05D006074 6.7e-66 254.2 164 78.0
BcaB02g10088 Brassica carinata HOM05D005110 ORTHO05D006074 2.0e-65 252.7 164 77.4
A07p18150 Brassica napus HOM05D005110 ORTHO05D006074 4.3e-65 251.5 164 76.8
BcaC02g10869 Brassica carinata HOM05D005110 ORTHO05D006074 4.8e-64 248.1 164 76.8
BraA07t29533Z Brassica rapa HOM05D005110 ORTHO05D006074 2.4e-63 245.7 164 75.6
THA.LOC104800521 Tarenaya hassleriana HOM05D005110 ORTHO05D006074 3.4e-41 172.2 169 62.1
Gohir.A05G079700 Gossypium hirsutum HOM05D005110 ORTHO05D006074 2.2e-32 142.9 167 49.1
Gohir.D05G082600 Gossypium hirsutum HOM05D005110 ORTHO05D006074 2.8e-32 142.5 171 50.9
Gorai.009G084200 Gossypium raimondii HOM05D005110 ORTHO05D006074 2.8e-32 142.5 171 50.9
Duzib168G1438 Durio zibethinus HOM05D005110 ORTHO05D006074 4.1e-31 138.7 178 46.6
Dinv22825 Davidia involucrata HOM05D005110 ORTHO05D006074 5.9e-30 134.8 179 46.9
GSVIVG01036094001 Vitis vinifera HOM05D005110 ORTHO05D006074 1.7e-29 133.3 168 47.0
COL.COLO4_34021 Corchorus olitorius HOM05D005110 ORTHO05D006074 5.0e-29 131.7 177 45.8
Ciclev10029378m.g Citrus clementina HOM05D005110 ORTHO05D006074 8.6e-29 131.0 180 47.2
Thecc.09G280200 Theobroma cacao HOM05D005110 ORTHO05D006074 8.6e-29 131.0 177 45.8
TWI31G0848 Tripterygium wilfordii HOM05D005110 ORTHO05D006074 1.1e-28 130.6 173 47.4
VMungo1080G1295 Vigna mungo HOM05D005110 ORTHO05D006074 1.1e-28 130.6 168 47.6
TWI79G0870 Tripterygium wilfordii HOM05D005110 ORTHO05D006074 1.9e-28 129.8 171 45.6
Hma1.2p1_0587F.1_g184070 Hydrangea macrophylla HOM05D005110 ORTHO05D006074 2.5e-28 129.4 181 43.1
Duzib150G1383 Durio zibethinus HOM05D005110 ORTHO05D006074 5.5e-28 128.3 177 44.6
Cpa.g.sc195.13 Carica papaya HOM05D005110 ORTHO05D006074 7.2e-28 127.9 169 45.6
Glyma.11G182100 Glycine max HOM05D005110 ORTHO05D006074 7.2e-28 127.9 169 46.2
Hund18768 Selenicereus undatus HOM05D005110 ORTHO05D006074 1.2e-27 127.1 164 48.2
Atru.chr3.3190 Acer truncatum HOM05D005110 ORTHO05D006074 2.1e-27 126.3 178 42.7
Duzib170G1118 Durio zibethinus HOM05D005110 ORTHO05D006074 2.8e-27 125.9 178 43.8
Prupe.6G134300 Prunus persica HOM05D005110 ORTHO05D006074 2.8e-27 125.9 175 43.4
ECA248G3565 Erigeron canadensis HOM05D005110 ORTHO05D006074 4.7e-27 125.2 178 43.3
Potri.009G019300 Populus trichocarpa HOM05D005110 ORTHO05D006074 4.7e-27 125.2 166 45.2
Glyma.13G315400 Glycine max HOM05D005110 ORTHO05D006074 6.1e-27 124.8 173 45.1
Medtr2g086680 Medicago truncatula HOM05D005110 ORTHO05D006074 6.1e-27 124.8 169 42.6
Manes.11G163300 Manihot esculenta HOM05D005110 ORTHO05D006074 8.0e-27 124.4 174 44.3
Peaxi162Scf00091g00622 Petunia axillaris HOM05D005110 ORTHO05D006074 8.0e-27 124.4 171 46.2
Psat7g142160 Pisum sativum HOM05D005110 ORTHO05D006074 8.0e-27 124.4 167 43.7
TPR.G17227 Trifolium pratense HOM05D005110 ORTHO05D006074 8.0e-27 124.4 167 44.3
DCAR_010338 Daucus carota HOM05D005110 ORTHO05D006074 1.4e-26 123.6 171 43.3
Sabra09G0012800 Salix brachista HOM05D005110 ORTHO05D006074 1.4e-26 123.6 167 43.7
Phvul.005G122600 Phaseolus vulgaris HOM05D005110 ORTHO05D006074 2.3e-26 122.9 170 44.7
CANSAT54G0919 Cannabis sativa HOM05D005110 ORTHO05D006074 4.0e-26 122.1 170 43.5
ClCG02G022270 Citrullus lanatus HOM05D005110 ORTHO05D006074 5.2e-26 121.7 184 42.9
Dinv42535 Davidia involucrata HOM05D005110 ORTHO05D006074 5.2e-26 121.7 171 43.9
Eucgr.B03836 Eucalyptus grandis HOM05D005110 ORTHO05D006074 5.2e-26 121.7 181 41.4
QL01p011992 Quercus lobata HOM05D005110 ORTHO05D006074 5.2e-26 121.7 171 42.7
arahy.Tifrunner.gnm1.ann1.XFIF97 Arachis hypogaea HOM05D005110 ORTHO05D006074 6.8e-26 121.3 165 48.5
Actinidia37076 Actinidia chinensis HOM05D005110 ORTHO05D006074 8.9e-26 120.9 175 40.6
PGSC0003DMG400005884 Solanum tuberosum HOM05D005110 ORTHO05D006074 8.9e-26 120.9 167 43.7
Lj3g0002892 Lotus japonicus HOM05D005110 ORTHO05D006074 1.2e-25 120.6 163 44.8
arahy.Tifrunner.gnm1.ann1.EYNG7S Arachis hypogaea HOM05D005110 ORTHO05D006074 2.6e-25 119.4 165 47.9
CSS0022586 Camellia sinensis var. sinensis HOM05D005110 ORTHO05D006074 3.4e-25 119.0 171 42.1
CsaV3_6G038400 Cucumis sativus L. HOM05D005110 ORTHO05D006074 3.4e-25 119.0 169 43.8
Lalb_Chr19g0136401 Lupinus albus HOM05D005110 ORTHO05D006074 3.4e-25 119.0 173 42.8
MD11G1167600 Malus domestica HOM05D005110 ORTHO05D006074 3.4e-25 119.0 178 41.6
Psat5g259000 Pisum sativum HOM05D005110 ORTHO05D006074 3.4e-25 119.0 169 39.6
FvH4_3g25370 Fragaria vesca HOM05D005110 ORTHO05D006074 4.4e-25 118.6 171 41.5
FAN21G3897 Fragaria x ananassa HOM05D005110 ORTHO05D006074 4.4e-25 118.6 171 41.5
Glyma.12G091100 Glycine max HOM05D005110 ORTHO05D006074 4.4e-25 118.6 167 44.3
MD03G1148100 Malus domestica HOM05D005110 ORTHO05D006074 4.4e-25 118.6 178 39.9
Phvul.011G095400 Phaseolus vulgaris HOM05D005110 ORTHO05D006074 5.7e-25 118.2 162 44.4
Sopen06g030680 Solanum pennellii HOM05D005110 ORTHO05D006074 5.7e-25 118.2 166 43.4
CiPaw.14G098700 Carya illinoinensis HOM05D005110 ORTHO05D006074 7.5e-25 117.9 170 42.9
FAN11G1413 Fragaria x ananassa HOM05D005110 ORTHO05D006074 7.5e-25 117.9 171 41.5
CAN.G919.35 Capsicum annuum HOM05D005110 ORTHO05D006074 9.8e-25 117.5 171 42.1
MELO3C014504.2 Cucumis melo HOM05D005110 ORTHO05D006074 9.8e-25 117.5 169 43.2
FAN25G3715 Fragaria x ananassa HOM05D005110 ORTHO05D006074 1.3e-24 117.1 171 41.5
Nitab4.5_0000937g0070 Nicotiana tabacum HOM05D005110 ORTHO05D006074 2.2e-24 116.3 163 41.7
Rhsim13G0112900 Rhododendron simsii HOM05D005110 ORTHO05D006074 2.2e-24 116.3 176 40.9
Lj3g0016581 Lotus japonicus HOM05D005110 ORTHO05D006074 3.7e-24 115.5 172 42.4
Oeu035569.1 Olea europaea HOM05D005110 ORTHO05D006074 3.7e-24 115.5 172 44.2
Solyc06g074260.4 Solanum lycopersicum HOM05D005110 ORTHO05D006074 3.7e-24 115.5 167 41.9
QL01p011978 Quercus lobata HOM05D005110 ORTHO05D006074 4.9e-24 115.2 178 43.3
VMungo1127G0906 Vigna mungo HOM05D005110 ORTHO05D006074 4.9e-24 115.2 163 44.2
HanXRQChr01g0024471 Helianthus annuus HOM05D005110 ORTHO05D006074 6.3e-24 114.8 170 42.4
Lalb_Chr03g0028181 Lupinus albus HOM05D005110 ORTHO05D006074 8.3e-24 114.4 168 41.7
Sed0010097 Sechium edule HOM05D005110 ORTHO05D006074 8.3e-24 114.4 184 44.0
Oeu027156.1 Olea europaea HOM05D005110 ORTHO05D006074 1.1e-23 114.0 170 41.8
Lalb_Chr01g0004911 Lupinus albus HOM05D005110 ORTHO05D006074 1.4e-23 113.6 168 40.5
Nn2g14215 Nelumbo nucifera HOM05D005110 ORTHO05D006074 1.4e-23 113.6 181 44.8
SGA_v2.0_scaffold22G09852 Striga asiatica HOM05D005110 ORTHO05D006074 1.4e-23 113.6 174 40.2
Actinidia25117 Actinidia chinensis HOM05D005110 ORTHO05D006074 2.4e-23 112.8 183 40.4
Oeu002365.1 Olea europaea HOM05D005110 ORTHO05D006074 2.4e-23 112.8 170 40.6
Migut.D02434 Erythranthe guttata HOM05D005110 ORTHO05D006074 3.2e-23 112.5 177 37.9
Lsat_1_v5_gn_1_59041 Lactuca sativa HOM05D005110 ORTHO05D006074 3.2e-23 112.5 162 42.0
Cfa009996 Carpinus fangiana HOM05D005110 ORTHO05D006074 4.1e-23 112.1 157 43.3
CSS0002660 Camellia sinensis var. sinensis HOM05D005110 ORTHO05D006074 5.4e-23 111.7 163 42.3
DCAR_012208 Daucus carota HOM05D005110 ORTHO05D006074 5.4e-23 111.7 178 37.6
Nitab4.5_0005472g0010 Nicotiana tabacum HOM05D005110 ORTHO05D006074 7.0e-23 111.3 165 41.8
SalBow6G3038 Salvia bowleyana HOM05D005110 ORTHO05D006074 7.0e-23 111.3 176 41.5
PGR102G3267 Punica granatum HOM05D005110 ORTHO05D006074 9.2e-23 110.9 174 43.1
MSTRG.18766 Avicennia marina HOM05D005110 ORTHO05D006074 1.2e-22 110.5 170 41.2
arahy.Tifrunner.gnm1.ann1.NUG06Z Arachis hypogaea HOM05D005110 ORTHO05D006074 2.0e-22 109.8 177 41.8
Sc06g0008710 Simmondsia chinensis HOM05D005110 ORTHO05D006074 2.0e-22 109.8 158 44.9
arahy.Tifrunner.gnm1.ann1.GADS7N Arachis hypogaea HOM05D005110 ORTHO05D006074 4.5e-22 108.6 175 42.3
Cc01_g08910 Coffea canephora HOM05D005110 ORTHO05D006074 4.5e-22 108.6 177 41.2
HanXRQChr13g0426031 Helianthus annuus HOM05D005110 ORTHO05D006074 4.5e-22 108.6 178 38.8
MSTRG.21034 Avicennia marina HOM05D005110 ORTHO05D006074 1.0e-21 107.5 177 39.5
CiPaw.13G134200 Carya illinoinensis HOM05D005110 ORTHO05D006074 1.3e-21 107.1 182 39.0
MBI17_g32417_MAGBIO Magnolia biondii HOM05D005110 ORTHO05D006074 1.3e-21 107.1 183 37.7
vmacro03324 Vaccinium macrocarpon HOM05D005110 ORTHO05D006074 1.3e-21 107.1 177 40.7
Rhsim01G0204600 Rhododendron simsii HOM05D005110 ORTHO05D006074 6.6e-21 104.8 175 38.3
Aqoxy4G02728 Aquilegia oxysepala HOM05D005110 ORTHO05D006074 1.5e-20 103.6 173 41.6
vmacro14345 Vaccinium macrocarpon HOM05D005110 ORTHO05D006074 1.5e-20 103.6 191 38.2
Sp6g22820 Schrenkiella parvula HOM05D005110 ORTHO05D006074 9.5e-20 100.9 174 42.0
ClCG01G012070 Citrullus lanatus HOM05D005110 ORTHO05D006074 1.2e-19 100.5 182 34.6
THA.LOC104810920 Tarenaya hassleriana HOM05D005110 ORTHO05D006074 1.2e-19 100.5 168 39.9
AT5G22430 Arabidopsis thaliana HOM05D005110 ORTHO05D006074 1.6e-19 100.1 174 42.5
CsaV3_1G014930 Cucumis sativus L. HOM05D005110 ORTHO05D006074 1.6e-19 100.1 168 35.1
CsaV3_1G015850 Cucumis sativus L. HOM05D005110 ORTHO05D006074 6.1e-19 98.2 167 34.7
AL6G33450 Arabidopsis lyrata HOM05D005110 ORTHO05D006074 1.0e-18 97.4 174 40.8
BraA02t05659Z Brassica rapa HOM05D005110 ORTHO05D006074 1.8e-18 96.7 174 42.0
QL01p011973 Quercus lobata HOM05D005110 ORTHO05D006074 4.0e-18 95.5 152 42.1
MELO3C004693.2 Cucumis melo HOM05D005110 ORTHO05D006074 5.2e-18 95.1 181 34.8
Thhalv10014830m.g Eutrema salsugineum HOM05D005110 ORTHO05D006074 5.2e-18 95.1 174 39.7
Carub.0006s2017 Capsella rubella HOM05D005110 ORTHO05D006074 6.8e-18 94.7 174 40.8
BNapus_Darmor_BZH_scaffold_38p00660 Brassica napus HOM05D005110 ORTHO05D006074 1.2e-17 94.0 174 40.2
C02p10870 Brassica napus HOM05D005110 ORTHO05D006074 1.2e-17 94.0 173 38.7
CARHR191100 Cardamine hirsuta HOM05D005110 ORTHO05D006074 1.5e-17 93.6 174 41.4
Aa31LG1G13130 Aethionema arabicum HOM05D005110 ORTHO05D006074 3.4e-17 92.4 170 40.0
BcaB08g36432 Brassica carinata HOM05D000477 ORTHO05D006074 3.4e-17 92.4 166 39.8
BolC2t07157H Brassica oleracea HOM05D005110 ORTHO05D006074 4.4e-17 92.0 174 40.8
BcaB05g22726 Brassica carinata HOM05D005110 ORTHO05D006074 7.5e-17 91.3 174 40.8
TAR369G1010 Trochodendron aralioides HOM05D005110 ORTHO05D006074 1.7e-16 90.1 123 47.2
Hund20930 Selenicereus undatus HOM05D005110 ORTHO05D006074 1.4e-15 87.0 128 43.0
Lj2P968T16 Lonicera japonica HOM05D005110 ORTHO05D006074 1.9e-15 86.7 118 44.9
HPP92_011908 Vanilla planifolia HOM05D005110 ORTHO05D006074 6.0e-14 81.6 115 46.1
TAR623G0362 Trochodendron aralioides HOM05D005110 ORTHO05D006074 5.0e-13 78.6 128 39.8
ATR0580G107 Amborella trichopoda HOM05D005110 ORTHO05D006074 1.1e-12 77.4 186 35.5
BcaC03g13883 Brassica carinata HOM05D005110 ORTHO05D006074 1.2e-11 73.9 149 36.2
HPP92_005471 Vanilla planifolia HOM05D005110 ORTHO05D006074 1.5e-09 67.0 202 31.2
BolC9t58287H Brassica oleracea HOM05D005110 ORTHO05D006074 1.7e-08 63.5 159 34.6
Manes.04G002101 Manihot esculenta HOM05D005110 ORTHO05D006074 2.2e-08 63.2 114 33.3
C09p54160 Brassica napus HOM05D005110 ORTHO05D006074 7.1e-07 58.2 157 33.1
Haze_23356 Corylus avellana HOM05D005110 ORTHO05D006074 1.2e-06 57.4 82 45.1


User provided reference genes

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