Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT2G26930 Arabidopsis thaliana HOM05D006216 ORTHO05D007760 4.0e-218 761.1 384 100.0
AL4G20170 Arabidopsis lyrata HOM05D006216 ORTHO05D007760 2.5e-212 741.9 384 96.9
Carub.0004s0743 Capsella rubella HOM05D006216 ORTHO05D007760 6.2e-211 737.3 389 95.4
Sp4g08430 Schrenkiella parvula HOM05D006216 ORTHO05D007760 2.0e-201 705.7 383 93.0
A07p17910 Brassica napus HOM05D006216 ORTHO05D007760 5.4e-199 697.6 384 91.1
BraA07t29509Z Brassica rapa HOM05D006216 ORTHO05D007760 5.4e-199 697.6 384 91.1
BolC4t23960H Brassica oleracea HOM05D006216 ORTHO05D007760 2.7e-198 695.3 384 90.6
BcaC02g10847 Brassica carinata HOM05D006216 ORTHO05D007760 1.7e-197 692.6 384 90.4
C04p24560 Brassica napus HOM05D006216 ORTHO05D007760 1.7e-197 692.6 384 90.4
CARHR119100 Cardamine hirsuta HOM05D006216 ORTHO05D007760 5.6e-196 687.6 387 90.2
Thhalv10002004m.g Eutrema salsugineum HOM05D006216 ORTHO05D007760 4.7e-195 684.5 392 88.5
BcaB02g10053 Brassica carinata HOM05D006216 ORTHO05D007760 3.1e-194 681.8 387 89.9
Aa31LG5G8850 Aethionema arabicum HOM05D006216 ORTHO05D007760 4.6e-182 641.3 438 75.8
THA.LOC104816956 Tarenaya hassleriana HOM05D006216 ORTHO05D007760 3.3e-180 635.2 397 78.8
PGR119G0354 Punica granatum HOM05D006216 ORTHO05D007760 9.6e-164 580.5 353 77.6
Manes.01G176400 Manihot esculenta HOM05D006216 ORTHO05D007760 2.8e-163 578.9 369 78.0
QL01p020730 Quercus lobata HOM05D006216 ORTHO05D007760 8.1e-163 577.4 362 76.0
Gohir.A07G119000 Gossypium hirsutum HOM05D006216 ORTHO05D007760 3.1e-162 575.5 355 77.2
Gohir.D07G123300 Gossypium hirsutum HOM05D006216 ORTHO05D007760 2.0e-161 572.8 355 76.9
RcHm_v2.0_Chr5g0050131 Rosa chinensis HOM05D006216 ORTHO05D007760 7.6e-161 570.9 361 76.5
Thecc.09G251000 Theobroma cacao HOM05D006216 ORTHO05D007760 1.0e-160 570.5 331 80.4
Hma1.2p1_1843F.1_g305010 Hydrangea macrophylla HOM05D006216 ORTHO05D007760 2.2e-160 569.3 369 74.5
Manes.02G134400 Manihot esculenta HOM05D006216 ORTHO05D007760 2.9e-160 568.9 369 77.0
Ciclev10015579m.g Citrus clementina HOM05D006216 ORTHO05D007760 4.9e-160 568.2 356 77.5
CANSAT54G1188 Cannabis sativa HOM05D006216 ORTHO05D007760 6.5e-160 567.8 353 77.1
MD03G1163100 Malus domestica HOM05D006216 ORTHO05D007760 1.9e-159 566.2 338 79.3
Sed0006982 Sechium edule HOM05D006216 ORTHO05D007760 3.2e-159 565.5 392 71.9
CiPaw.13G146100 Carya illinoinensis HOM05D006216 ORTHO05D007760 4.2e-159 565.1 375 72.8
Gorai.001G133000 Gossypium raimondii HOM05D006216 ORTHO05D007760 4.2e-159 565.1 358 76.0
VMungo1215G0750 Vigna mungo HOM05D006216 ORTHO05D007760 4.2e-159 565.1 367 75.2
MELO3C015605.2 Cucumis melo HOM05D006216 ORTHO05D007760 5.5e-159 564.7 387 72.4
Lalb_Chr18g0048331 Lupinus albus HOM05D006216 ORTHO05D007760 7.1e-159 564.3 383 72.1
Actinidia07007 Actinidia chinensis HOM05D006216 ORTHO05D007760 2.7e-158 562.4 363 74.4
Lj6g0023824 Lotus japonicus HOM05D006216 ORTHO05D007760 3.5e-158 562.0 359 75.2
Haze_23545 Corylus avellana HOM05D006216 ORTHO05D007760 1.8e-157 559.7 364 73.4
Dinv29341 Davidia involucrata HOM05D006216 ORTHO05D007760 1.8e-157 559.7 368 74.2
arahy.Tifrunner.gnm1.ann1.G3L2E7 Arachis hypogaea HOM05D006216 ORTHO05D007760 3.0e-157 558.9 362 75.4
arahy.Tifrunner.gnm1.ann1.CPM77E Arachis hypogaea HOM05D006216 ORTHO05D007760 3.9e-157 558.5 331 79.8
MSTRG.12426 Avicennia marina HOM05D006216 ORTHO05D007760 5.1e-157 558.1 363 72.5
Cfa010159 Carpinus fangiana HOM05D006216 ORTHO05D007760 5.1e-157 558.1 374 71.4
Phvul.006G019500 Phaseolus vulgaris HOM05D006216 ORTHO05D007760 5.1e-157 558.1 368 73.1
TWI31G0496 Tripterygium wilfordii HOM05D006216 ORTHO05D007760 5.1e-157 558.1 369 74.0
Medtr3g437340 Medicago truncatula HOM05D006216 ORTHO05D007760 6.7e-157 557.8 363 75.2
GSVIVG01037382001 Vitis vinifera HOM05D006216 ORTHO05D007760 6.7e-157 557.8 370 73.2
Ca_13675_v3 Cicer arietinum L. HOM05D006216 ORTHO05D007760 8.7e-157 557.4 360 74.7
vmacro04357 Vaccinium macrocarpon HOM05D006216 ORTHO05D007760 8.7e-157 557.4 378 72.5
AUR62024257 Chenopodium quinoa HOM05D006216 ORTHO05D007760 1.1e-156 557.0 375 72.8
Eucgr.J00662 Eucalyptus grandis HOM05D006216 ORTHO05D007760 1.1e-156 557.0 353 74.2
Nitab4.5_0002300g0020 Nicotiana tabacum HOM05D006216 ORTHO05D007760 1.1e-156 557.0 330 78.2
CSS0031944 Camellia sinensis var. sinensis HOM05D006216 ORTHO05D007760 1.5e-156 556.6 375 71.7
CsaV3_1G041900 Cucumis sativus L. HOM05D006216 ORTHO05D007760 1.5e-156 556.6 366 73.5
Duzib168G1114 Durio zibethinus HOM05D006216 ORTHO05D007760 1.5e-156 556.6 368 75.3
TAR633G2593 Trochodendron aralioides HOM05D006216 ORTHO05D007760 1.5e-156 556.6 365 73.4
FAN21G1147 Fragaria x ananassa HOM05D006216 ORTHO05D007760 1.9e-156 556.2 353 75.4
Glyma.20G046800 Glycine max HOM05D006216 ORTHO05D007760 1.9e-156 556.2 360 74.7
TWI75G0612 Tripterygium wilfordii HOM05D006216 ORTHO05D007760 2.5e-156 555.8 375 72.3
FvH4_3g27650 Fragaria vesca HOM05D006216 ORTHO05D007760 4.3e-156 555.1 349 75.4
Glyma.13G072700 Glycine max HOM05D006216 ORTHO05D007760 4.3e-156 555.1 350 75.4
FAN11G0826 Fragaria x ananassa HOM05D006216 ORTHO05D007760 5.7e-156 554.7 353 74.8
FAN25G0225 Fragaria x ananassa HOM05D006216 ORTHO05D007760 7.4e-156 554.3 353 75.4
Lj2A825T28 Lonicera japonica HOM05D006216 ORTHO05D007760 9.6e-156 553.9 375 73.1
TPR.G11861 Trifolium pratense HOM05D006216 ORTHO05D007760 9.6e-156 553.9 365 73.7
CSS0004136 Camellia sinensis var. sinensis HOM05D006216 ORTHO05D007760 1.3e-155 553.5 377 73.2
Solyc01g009010.3 Solanum lycopersicum HOM05D006216 ORTHO05D007760 3.7e-155 552.0 342 75.1
ECA238G2733 Erigeron canadensis HOM05D006216 ORTHO05D007760 6.3e-155 551.2 381 72.7
Potri.001G225100 Populus trichocarpa HOM05D006216 ORTHO05D007760 1.1e-154 550.4 363 74.1
Sopen01g004500 Solanum pennellii HOM05D006216 ORTHO05D007760 1.1e-154 550.4 342 74.9
Psat5g182280 Pisum sativum HOM05D006216 ORTHO05D007760 2.4e-154 549.3 342 76.0
PGSC0003DMG400022703 Solanum tuberosum HOM05D006216 ORTHO05D007760 3.1e-154 548.9 342 75.1
PSO339G5720 Papaver somniferum HOM05D006216 ORTHO05D007760 6.9e-154 547.7 341 76.2
SalBow6G4438 Salvia bowleyana HOM05D006216 ORTHO05D007760 6.9e-154 547.7 397 69.0
Potri.009G021800 Populus trichocarpa HOM05D006216 ORTHO05D007760 9.0e-154 547.4 359 74.1
Migut.D00703 Erythranthe guttata HOM05D006216 ORTHO05D007760 1.2e-153 547.0 377 71.1
Sc04g0009550 Simmondsia chinensis HOM05D006216 ORTHO05D007760 1.2e-153 547.0 374 70.3
Lsat_1_v5_gn_2_36221 Lactuca sativa HOM05D006216 ORTHO05D007760 1.5e-153 546.6 368 72.8
Peaxi162Scf00050g02022 Petunia axillaris HOM05D006216 ORTHO05D007760 2.0e-153 546.2 350 74.6
Cc01_g07140 Coffea canephora HOM05D006216 ORTHO05D007760 2.6e-153 545.8 361 72.9
CAN.G714.2 Capsicum annuum HOM05D006216 ORTHO05D007760 5.9e-153 544.7 371 70.6
PSO384G3582 Papaver somniferum HOM05D006216 ORTHO05D007760 7.6e-153 544.3 341 75.4
Zm00001eb150630 Zea mays HOM05D006216 ORTHO05D007760 1.0e-152 543.9 343 75.2
Lalb_Chr15g0080191 Lupinus albus HOM05D006216 ORTHO05D007760 1.3e-152 543.5 382 70.7
HanXRQChr14g0433421 Helianthus annuus HOM05D006216 ORTHO05D007760 1.1e-151 540.4 337 75.7
AUR62005484 Chenopodium quinoa HOM05D006216 ORTHO05D007760 3.2e-151 538.9 363 72.2
Hund25392 Selenicereus undatus HOM05D006216 ORTHO05D007760 3.2e-151 538.9 361 71.5
Nn7g37015 Nelumbo nucifera HOM05D006216 ORTHO05D007760 5.5e-151 538.1 353 73.7
Sabra16G0133700 Salix brachista HOM05D006216 ORTHO05D007760 6.1e-150 534.6 415 65.5
Rhsim13G0202500 Rhododendron simsii HOM05D006216 ORTHO05D007760 6.7e-149 531.2 370 71.6
MSTRG.21323 Avicennia marina HOM05D006216 ORTHO05D007760 2.5e-148 529.3 357 72.5
Aqoxy1G00047 Aquilegia oxysepala HOM05D006216 ORTHO05D007760 3.3e-148 528.9 333 74.8
Os01g0802100 Oryza sativa ssp. japonica HOM05D006216 ORTHO05D007760 1.6e-147 526.6 335 74.3
ClCG03G014320 Citrullus lanatus HOM05D006216 ORTHO05D007760 4.8e-147 525.0 387 68.5
ATR0782G058 Amborella trichopoda HOM05D006216 ORTHO05D007760 2.0e-145 519.6 333 71.8
SGA_v2.0_scaffold79G25547 Striga asiatica HOM05D006216 ORTHO05D007760 3.4e-145 518.8 399 66.4
CDE08G0663 Ceratophyllum demersum HOM05D006216 ORTHO05D007760 5.9e-145 518.1 305 79.7
Atru.BG.104.p Acer truncatum HOM05D006216 ORTHO05D007760 2.7e-142 509.2 299 80.6
CDE09G0516 Ceratophyllum demersum HOM05D006216 ORTHO05D007760 5.1e-141 505.0 334 74.3
EL10Ac6g13846 Beta vulgaris HOM05D006216 ORTHO05D007760 1.3e-139 500.4 362 68.5
Migut.N02401 Erythranthe guttata HOM05D006216 ORTHO05D007760 1.5e-137 493.4 305 76.1
Nitab4.5_0000428g0050 Nicotiana tabacum HOM05D006216 ORTHO05D007760 1.2e-134 483.8 334 70.4
HPP92_001661 Vanilla planifolia HOM05D006216 ORTHO05D007760 1.6e-134 483.4 394 62.4
DCAR_006327 Daucus carota HOM05D006216 ORTHO05D007760 2.1e-134 483.0 374 66.0
Atru.chr3.2830 Acer truncatum HOM05D006216 ORTHO05D007760 3.0e-133 479.2 315 74.6
unitig_27.g25131 Utricularia gibba HOM05D006216 ORTHO05D007760 5.7e-132 474.9 303 73.6
Pp3c26_490 Physcomitrium patens HOM05D006216 ORTHO05D007760 2.6e-129 466.1 324 64.2
Mapoly0033s0031 Marchantia polymorpha HOM05D006216 ORTHO05D007760 6.1e-126 454.9 328 65.9
SMO367G1046 Selaginella moellendorffii HOM05D006216 ORTHO05D007760 2.0e-124 449.9 323 65.6
CBR_g22270 Chara braunii HOM05D006216 ORTHO05D007760 1.6e-118 430.3 336 60.7
Hma1.2p1_1843F.1_g305000 Hydrangea macrophylla HOM05D006216 ORTHO05D007760 6.1e-118 428.3 273 75.8
MBI19_g37419_MAGBIO Magnolia biondii HOM05D006216 ORTHO05D007760 1.2e-110 404.1 333 61.3
AagrBONN_evm.TU.Sc2ySwM_228.3849 Anthoceros agrestis HOM05D006216 ORTHO05D007760 6.8e-109 398.3 285 66.0
Prupe.4G269400 Prunus persica HOM05D006216 ORTHO05D007760 5.4e-106 388.7 260 76.5
MCO08G209 Micromonas commoda HOM05D006216 ORTHO05D007760 3.9e-88 329.3 296 55.1
Cre02.g145050 Chlamydomonas reinhardtii HOM05D006216 ORTHO05D007760 2.6e-84 316.6 294 52.7
PRCOL_00004294 Prasinoderma coloniale HOM05D006216 ORTHO05D007760 2.7e-81 306.6 303 49.8
Sabra09G0013700 Salix brachista HOM05D006216 ORTHO05D007760 1.8e-77 293.9 291 55.0
SEGI_15556 Sequoiadendron giganteum HOM05D006216 ORTHO05D007760 8.6e-72 275.0 182 73.1
Glyma.17G179800 Glycine max HOM05D006216 ORTHO05D007760 1.9e-63 247.3 181 69.6
Hund17544 Selenicereus undatus HOM05D006216 ORTHO05D007760 9.9e-52 208.4 174 58.6
SEGI_04634 Sequoiadendron giganteum HOM05D006216 ORTHO05D007760 1.0e-48 198.4 130 65.4
FAN26G0546 Fragaria x ananassa HOM05D006216 ORTHO05D010609 9.3e-42 175.3 145 65.5
SMO332G0003 Selaginella moellendorffii HOM05D006216 ORTHO05D007760 1.8e-32 144.4 102 67.6
SMO332G0042 Selaginella moellendorffii HOM05D006216 ORTHO05D007760 1.5e-23 114.8 115 50.4
Ca_29165_v3 Cicer arietinum L. HOM05D006216 ORTHO05D007760 1.4e-21 108.2 161 39.1
Oeu063625.1 Olea europaea HOM05D006216 ORTHO05D007760 1.0e-19 102.1 92 58.7
SMO198G0007 Selaginella moellendorffii HOM05D006216 ORTHO05D007760 1.3e-19 101.7 106 50.9
Hund00952 Selenicereus undatus HOM05D006216 ORTHO05D007760 7.2e-18 95.9 74 59.5
DCAR_006325 Daucus carota HOM05D006216 ORTHO05D007760 6.7e-16 89.4 61 65.6


User provided reference genes

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