Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT2G26865 Arabidopsis thaliana HOM05D008704 ORTHO05D012580 6.0e-36 153.7 79 100.0
AL4G20080 Arabidopsis lyrata HOM05D008704 ORTHO05D012580 4.3e-26 120.9 69 85.5
Sp5g35340 Schrenkiella parvula HOM05D008704 ORTHO05D012580 4.4e-23 110.9 76 72.4
BolC2t09080H Brassica oleracea HOM05D008704 ORTHO05D012580 6.4e-22 107.1 65 81.5
C02p30290 Brassica napus HOM05D008704 ORTHO05D012580 1.9e-21 105.5 65 81.5
BcaC03g15418 Brassica carinata HOM05D008704 ORTHO05D012580 7.1e-21 103.6 65 76.9
A07p45200 Brassica napus HOM05D008704 ORTHO05D012580 7.1e-21 103.6 74 70.3
C02p30300 Brassica napus HOM05D008704 ORTHO05D012580 7.1e-21 103.6 65 76.9
BcaC03g15964 Brassica carinata HOM05D008704 ORTHO05D012580 1.2e-20 102.8 68 73.5
BolC2t09740H Brassica oleracea HOM05D008704 ORTHO05D012580 1.2e-20 102.8 68 73.5
A02p18270 Brassica napus HOM05D008704 ORTHO05D012580 1.6e-20 102.4 66 80.3
BcaB05g25267 Brassica carinata HOM05D008704 ORTHO05D012580 2.7e-20 101.7 70 72.9
A06p20070 Brassica napus HOM05D008704 ORTHO05D012580 2.7e-20 101.7 74 70.3
BraA06t25093Z Brassica rapa HOM05D008704 ORTHO05D012580 2.7e-20 101.7 74 70.3
C02p37300 Brassica napus HOM05D008704 ORTHO05D012580 3.5e-20 101.3 68 72.1
BcaC03g15416 Brassica carinata HOM05D008704 ORTHO05D012580 1.3e-19 99.4 59 83.1
Carub.0004s0737 Capsella rubella HOM05D008704 ORTHO05D012580 1.3e-19 99.4 77 64.9
A02p18260 Brassica napus HOM05D008704 ORTHO05D012580 5.1e-19 97.4 61 77.0
Thhalv10019401m.g Eutrema salsugineum HOM05D008704 ORTHO05D012580 7.6e-15 83.6 61 68.9
CARHR131070 Cardamine hirsuta HOM05D008704 ORTHO05D012979 2.1e-12 75.5 62 62.9
BraA07t32023Z Brassica rapa HOM05D008704 ORTHO05D012580 3.9e-11 71.2 47 78.7
Carub.0004s1857 Capsella rubella HOM05D008704 ORTHO05D012979 8.7e-11 70.1 59 57.6
A08p10210 Brassica napus HOM05D008704 ORTHO05D012979 1.9e-10 68.9 59 61.0
A08p10220 Brassica napus HOM05D008704 ORTHO05D012979 1.9e-10 68.9 59 61.0
BraA08t33019Z Brassica rapa HOM05D008704 ORTHO05D012979 1.9e-10 68.9 59 61.0
BolC8t48083H Brassica oleracea HOM05D008704 ORTHO05D012979 5.6e-10 67.4 59 59.3
BolC9t53693H Brassica oleracea HOM05D008704 ORTHO05D012979 1.3e-09 66.2 78 48.7
BcaB04g19872 Brassica carinata HOM05D008704 ORTHO05D012979 2.8e-09 65.1 65 52.3
C09p07750 Brassica napus HOM05D008704 ORTHO05D012979 2.8e-09 65.1 78 47.4
C09p07760 Brassica napus HOM05D008704 ORTHO05D012979 2.8e-09 65.1 78 47.4
C09p07770 Brassica napus HOM05D008704 ORTHO05D012979 2.8e-09 65.1 78 47.4
BolC9t53692H Brassica oleracea HOM05D008704 ORTHO05D012979 2.8e-09 65.1 78 47.4
Thhalv10023131m.g Eutrema salsugineum HOM05D008704 ORTHO05D012580 2.8e-09 65.1 74 47.3
AL4G32942 Arabidopsis lyrata HOM05D008704 ORTHO05D012979 4.8e-09 64.3 59 55.9
AT2G36724 Arabidopsis thaliana HOM05D008704 ORTHO05D012979 8.1e-09 63.5 59 55.9
BolC9t53691H Brassica oleracea HOM05D008704 ORTHO05D012979 1.1e-08 63.2 78 46.2
BcaC07g37701 Brassica carinata HOM05D008704 ORTHO05D012979 1.8e-08 62.4 49 61.2


User provided reference genes

Program Settings