Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT2G26680 Arabidopsis thaliana HOM05D005825 ORTHO05D006483 3.4e-178 628.2 320 100.0
AL4G19680 Arabidopsis lyrata HOM05D005825 ORTHO05D006483 1.6e-172 609.4 320 96.2
Carub.0004s0696 Capsella rubella HOM05D005825 ORTHO05D006483 3.8e-166 588.2 320 93.8
Sp4g09150 Schrenkiella parvula HOM05D005825 ORTHO05D006483 6.4e-161 570.9 320 90.6
Thhalv10002044m.g Eutrema salsugineum HOM05D005825 ORTHO05D006483 3.5e-159 565.1 320 90.3
A04p21320 Brassica napus HOM05D005825 ORTHO05D006483 2.4e-152 542.3 323 87.0
BraA04t17698Z Brassica rapa HOM05D005825 ORTHO05D006483 2.4e-152 542.3 323 87.0
Aa31LG5G9110 Aethionema arabicum HOM05D003776 ORTHO05D004459 7.8e-151 537.3 322 83.9
BcaB06g28186 Brassica carinata HOM05D005825 ORTHO05D006483 6.6e-150 534.3 321 85.4
C04p57230 Brassica napus HOM05D005825 ORTHO05D006483 7.3e-149 530.8 325 85.2
Thhalv10023596m.g Eutrema salsugineum HOM05D005825 ORTHO05D006483 1.2e-148 530.0 320 85.3
BolC4t27250H Brassica oleracea HOM05D005825 ORTHO05D006483 1.2e-146 523.5 325 83.4
BcaC02g08209 Brassica carinata HOM05D005825 ORTHO05D006483 9.8e-146 520.4 326 82.8
THA.LOC104815280 Tarenaya hassleriana HOM05D005825 ORTHO05D006483 2.1e-140 502.7 325 77.5
Cpa.g.sc75.29 Carica papaya HOM05D005825 ORTHO05D006483 1.7e-137 493.0 323 76.8
Duzib168G1077 Durio zibethinus HOM05D005825 ORTHO05D006483 1.2e-127 460.3 332 71.7
Sed0008025 Sechium edule HOM05D005825 ORTHO05D006483 3.5e-127 458.8 324 73.8
CANSAT11G1244 Cannabis sativa HOM05D005825 ORTHO05D006483 4.6e-127 458.4 323 70.0
MELO3C004508.2 Cucumis melo HOM05D005825 ORTHO05D006483 1.0e-126 457.2 321 72.9
EL10Ac8g18654 Beta vulgaris HOM05D005825 ORTHO05D006483 6.6e-126 454.5 324 72.5
Ciclev10008932m.g Citrus clementina HOM05D005825 ORTHO05D006483 6.6e-126 454.5 323 70.9
Gorai.010G064100 Gossypium raimondii HOM05D005825 ORTHO05D006483 6.6e-126 454.5 328 71.6
Sabra14G0011800 Salix brachista HOM05D005825 ORTHO05D006483 6.6e-126 454.5 320 73.1
TWI34G0282 Tripterygium wilfordii HOM05D005825 ORTHO05D006483 8.7e-126 454.1 328 71.0
ClCG11G003030 Citrullus lanatus HOM05D005825 ORTHO05D006483 1.1e-125 453.8 321 72.9
vmacro20556 Vaccinium macrocarpon HOM05D005825 ORTHO05D006483 1.1e-125 453.8 319 72.4
CsaV3_2G002850 Cucumis sativus L. HOM05D005825 ORTHO05D006483 1.9e-125 453.0 321 72.9
Thecc.09G126400 Theobroma cacao HOM05D005825 ORTHO05D006483 1.9e-125 453.0 326 71.2
Sabra02G0094300 Salix brachista HOM05D005825 ORTHO05D006483 3.3e-125 452.2 322 72.7
Hund09127 Selenicereus undatus HOM05D005825 ORTHO05D006483 3.3e-125 452.2 326 70.2
Gohir.D06G054601 Gossypium hirsutum HOM05D005825 ORTHO05D006483 9.6e-125 450.7 328 70.7
Potri.014G017900 Populus trichocarpa HOM05D005825 ORTHO05D006483 2.1e-124 449.5 322 71.7
Rhsim01G0070600 Rhododendron simsii HOM05D005825 ORTHO05D006483 2.4e-123 446.0 321 70.4
Atru.chr7.1162 Acer truncatum HOM05D005825 ORTHO05D006483 3.1e-123 445.7 327 70.6
Cfa003372 Carpinus fangiana HOM05D005825 ORTHO05D006483 3.1e-123 445.7 320 70.0
Dinv36528 Davidia involucrata HOM05D005825 ORTHO05D006483 4.0e-123 445.3 323 69.0
MBI16_g24711_MAGBIO Magnolia biondii HOM05D005825 ORTHO05D006483 6.9e-123 444.5 320 69.7
Gohir.A06G056101 Gossypium hirsutum HOM05D005825 ORTHO05D006483 1.2e-122 443.7 330 70.9
Manes.06G058801 Manihot esculenta HOM05D005825 ORTHO05D006483 3.4e-122 442.2 329 68.7
MD02G1032800 Malus domestica HOM05D005825 ORTHO05D006483 1.3e-121 440.3 322 69.6
Ca_21683_v3 Cicer arietinum L. HOM05D005825 ORTHO05D006483 2.2e-121 439.5 325 68.6
PGR142G1018 Punica granatum HOM05D005825 ORTHO05D006483 2.2e-121 439.5 326 68.4
CiPaw.03G244100 Carya illinoinensis HOM05D005825 ORTHO05D006483 2.9e-121 439.1 320 69.7
DCAR_009187 Daucus carota HOM05D005825 ORTHO05D006483 8.4e-121 437.6 324 69.4
Lalb_Chr13g0301881 Lupinus albus HOM05D005825 ORTHO05D006483 1.1e-120 437.2 326 67.8
Oeu007499.1 Olea europaea HOM05D005825 ORTHO05D006483 1.9e-120 436.4 330 67.6
CSS0017066 Camellia sinensis var. sinensis HOM05D005825 ORTHO05D006483 3.2e-120 435.6 322 68.6
Migut.B01717 Erythranthe guttata HOM05D005825 ORTHO05D006483 3.2e-120 435.6 327 68.2
FAN23G1198 Fragaria x ananassa HOM05D005825 ORTHO05D006483 3.2e-120 435.6 323 70.3
Actinidia40470 Actinidia chinensis HOM05D005825 ORTHO05D006483 4.2e-120 435.3 322 68.9
FAN19G0135 Fragaria x ananassa HOM05D005825 ORTHO05D006483 4.2e-120 435.3 323 70.0
Nn2g12789 Nelumbo nucifera HOM05D005825 ORTHO05D006483 4.2e-120 435.3 328 68.0
Rhsim01G0071200 Rhododendron simsii HOM05D005825 ORTHO05D006483 5.4e-120 434.9 329 68.1
FvH4_1g03280 Fragaria vesca HOM05D005825 ORTHO05D006483 7.1e-120 434.5 323 69.7
Glyma.13G167400 Glycine max HOM05D005825 ORTHO05D006483 1.2e-119 433.7 328 66.8
TAR625G0074 Trochodendron aralioides HOM05D005825 ORTHO05D006483 1.2e-119 433.7 327 69.7
Lj2C942T8 Lonicera japonica HOM05D005825 ORTHO05D006483 1.6e-119 433.3 349 66.2
MSTRG.19597 Avicennia marina HOM05D005825 ORTHO05D006483 2.1e-119 433.0 325 66.5
FAN26G2420 Fragaria x ananassa HOM05D005825 ORTHO05D006483 2.7e-119 432.6 323 69.7
CSS0027185 Camellia sinensis var. sinensis HOM05D005825 ORTHO05D006483 3.5e-119 432.2 322 68.3
Psat4g040200 Pisum sativum HOM05D005825 ORTHO05D006483 3.5e-119 432.2 325 67.7
Medtr4g114160 Medicago truncatula HOM05D005825 ORTHO05D006483 4.6e-119 431.8 325 67.4
Peaxi162Scf00157g01524 Petunia axillaris HOM05D005825 ORTHO05D006483 6.0e-119 431.4 320 68.4
Ah.09g226210 Amaranthus hybridus HOM05D005825 ORTHO05D006483 1.0e-118 430.6 326 66.9
Aqoxy5G01398 Aquilegia oxysepala HOM05D005825 ORTHO05D006483 1.0e-118 430.6 321 67.9
AUR62013360 Chenopodium quinoa HOM05D005825 ORTHO05D006483 1.3e-118 430.3 263 78.7
Lalb_Chr12g0197941 Lupinus albus HOM05D005825 ORTHO05D006483 1.3e-118 430.3 319 67.4
Phvul.003G164300 Phaseolus vulgaris HOM05D005825 ORTHO05D006483 1.3e-118 430.3 325 66.5
Sc08g0006620 Simmondsia chinensis HOM05D005825 ORTHO05D006483 1.8e-118 429.9 333 65.8
RcHm_v2.0_Chr2g0088431 Rosa chinensis HOM05D005825 ORTHO05D006483 3.0e-118 429.1 332 68.4
Solyc12g009430.2 Solanum lycopersicum HOM05D005825 ORTHO05D006483 3.9e-118 428.7 323 67.5
Sopen12g004430 Solanum pennellii HOM05D005825 ORTHO05D006483 5.1e-118 428.3 323 67.2
FAN28G2006 Fragaria x ananassa HOM05D005825 ORTHO05D006483 6.7e-118 427.9 323 69.7
Lj4g0013357 Lotus japonicus HOM05D005825 ORTHO05D006483 8.7e-118 427.6 322 66.5
PSO675G5818 Papaver somniferum HOM05D005825 ORTHO05D006483 8.7e-118 427.6 328 67.4
Prupe.7G242700 Prunus persica HOM05D005825 ORTHO05D006483 8.7e-118 427.6 325 67.7
arahy.Tifrunner.gnm1.ann1.1NB5KJ Arachis hypogaea HOM05D005825 ORTHO05D006483 1.9e-117 426.4 323 65.3
arahy.Tifrunner.gnm1.ann1.9UEQ51 Arachis hypogaea HOM05D005825 ORTHO05D006483 2.5e-117 426.0 327 64.8
CAN.G1591.11 Capsicum annuum HOM05D005825 ORTHO05D006483 3.3e-117 425.6 319 66.8
PSO782G3266 Papaver somniferum HOM05D005825 ORTHO05D006483 5.6e-117 424.9 326 67.5
Lsat_1_v5_gn_8_58680 Lactuca sativa HOM05D005825 ORTHO05D006483 7.4e-117 424.5 323 66.3
VMungo1215G3451 Vigna mungo HOM05D005825 ORTHO05D006483 7.4e-117 424.5 324 65.7
Hma1.2p1_0018F.1_g012420 Hydrangea macrophylla HOM05D005825 ORTHO05D006483 2.8e-116 422.5 318 67.0
Lj2A929T15 Lonicera japonica HOM05D005825 ORTHO05D006483 4.8e-116 421.8 348 65.8
SalBow3G4290 Salvia bowleyana HOM05D005825 ORTHO05D006483 4.8e-116 421.8 321 65.4
Hma1.2p1_2368F.1_g320700 Hydrangea macrophylla HOM05D005825 ORTHO05D006483 6.2e-116 421.4 318 66.7
DCAR_017816 Daucus carota HOM05D005825 ORTHO05D006483 3.1e-115 419.1 358 62.3
arahy.Tifrunner.gnm1.ann1.85XGXJ Arachis hypogaea HOM05D005825 ORTHO05D006483 4.5e-114 415.2 322 63.0
arahy.Tifrunner.gnm1.ann1.R6UVTB Arachis hypogaea HOM05D005825 ORTHO05D006483 2.9e-113 412.5 322 62.7
SGA_v2.0_scaffold299G47720 Striga asiatica HOM05D005825 ORTHO05D006483 2.9e-113 412.5 318 65.4
Eucgr.C01173 Eucalyptus grandis HOM05D005825 ORTHO05D006483 4.9e-113 411.8 326 64.7
PGSC0003DMG400002918 Solanum tuberosum HOM05D005825 ORTHO05D006483 4.2e-112 408.7 322 65.2
unitig_748.g8100 Utricularia gibba HOM05D005825 ORTHO05D006483 1.2e-111 407.1 326 65.0
Nitab4.5_0014105g0010 Nicotiana tabacum HOM05D005825 ORTHO05D006483 1.6e-111 406.8 319 65.2
HanXRQChr17g0537731 Helianthus annuus HOM05D005825 ORTHO05D006483 3.5e-111 405.6 318 65.7
CDE04G1080 Ceratophyllum demersum HOM05D005825 ORTHO05D006483 1.0e-110 404.1 326 65.6
Nitab4.5_0002658g0050 Nicotiana tabacum HOM05D005825 ORTHO05D006483 3.9e-110 402.1 320 65.0
HanXRQChr17g0537711 Helianthus annuus HOM05D005825 ORTHO05D006483 1.5e-109 400.2 318 64.5
HPP92_017605 Vanilla planifolia HOM05D005825 ORTHO05D006483 6.2e-108 394.8 328 62.2
ATR0225G021 Amborella trichopoda HOM05D005825 ORTHO05D006483 4.0e-107 392.1 265 74.0
SHI03392 Sapria himalayana HOM05D005825 ORTHO05D006483 2.0e-106 389.8 387 55.0
QL10p023454 Quercus lobata HOM05D005825 ORTHO05D006483 3.8e-105 385.6 499 46.1
Haze_25579 Corylus avellana HOM05D005825 ORTHO05D006483 1.2e-103 380.6 312 63.8
AUR62011128 Chenopodium quinoa HOM05D005825 ORTHO05D006483 6.7e-102 374.8 324 62.7
Zm00001eb043030 Zea mays HOM05D005825 ORTHO05D006483 8.7e-102 374.4 269 67.7
Os03g0566600 Oryza sativa ssp. japonica HOM05D005825 ORTHO05D006483 4.8e-100 368.6 264 67.0
HanXRQChr06g0180341 Helianthus annuus HOM05D005825 ORTHO05D006483 1.4e-99 367.1 285 65.3
CARHR118580 Cardamine hirsuta HOM05D005825 ORTHO05D006483 3.6e-95 352.4 201 86.6
Potri.002G119800 Populus trichocarpa HOM05D005825 ORTHO05D006483 3.1e-83 312.8 189 83.1
AagrBONN_evm.TU.Sc2ySwM_344.1792 Anthoceros agrestis HOM05D005825 ORTHO05D006483 3.8e-81 305.8 264 56.1
ECA246G2031 Erigeron canadensis HOM05D000004 ORTHO05D000002 2.5e-80 303.1 199 75.4
TPR.G10697 Trifolium pratense HOM05D005825 ORTHO05D006483 1.8e-78 297.0 183 79.2
SMO147G0115 Selaginella moellendorffii HOM05D005825 ORTHO05D006483 2.6e-77 293.1 261 54.0
CiPaw.04G171000 Carya illinoinensis HOM05D005825 ORTHO05D006483 1.8e-75 287.0 175 79.4
Glyma.17G115000 Glycine max HOM05D005825 ORTHO05D006483 5.0e-73 278.9 176 77.3
GSVIVG01015529001 Vitis vinifera HOM05D005825 ORTHO05D006483 6.5e-73 278.5 168 81.0
Cc06_g08520 Coffea canephora HOM05D005825 ORTHO05D006483 3.6e-71 272.7 167 79.0
CARHR118590 Cardamine hirsuta HOM05D005825 ORTHO05D006483 1.2e-55 221.1 121 91.7
Ca_13270_v3 Cicer arietinum L. HOM05D005825 ORTHO05D006483 2.8e-52 209.9 185 61.1
Actinidia21988 Actinidia chinensis HOM05D005825 ORTHO05D006483 3.8e-49 199.5 124 78.2
Ca_14592_v3 Cicer arietinum L. HOM05D005825 ORTHO05D006483 6.1e-47 192.2 217 52.5
VMungo0647G0470 Vigna mungo HOM05D005825 ORTHO05D006483 2.0e-45 187.2 162 54.3
Eucgr.G00617 Eucalyptus grandis HOM05D005825 ORTHO05D006483 9.8e-45 184.9 118 77.1
Eucgr.B02426 Eucalyptus grandis HOM05D005825 ORTHO05D006483 2.9e-44 183.3 118 76.3
Eucgr.C03225 Eucalyptus grandis HOM05D005825 ORTHO05D006483 8.0e-39 165.2 112 71.4
TAR381G0761 Trochodendron aralioides HOM05D005825 ORTHO05D006483 2.4e-35 153.7 154 57.1
Eucgr.E01840 Eucalyptus grandis HOM05D005825 ORTHO05D006483 3.0e-33 146.7 118 66.1
Eucgr.B02447 Eucalyptus grandis HOM05D005825 ORTHO05D006483 3.3e-32 143.3 95 75.8
CAN.G204.2 Capsicum annuum HOM05D005825 ORTHO05D006483 4.6e-18 96.3 73 64.4
Zm00001eb219900 Zea mays HOM05D005825 ORTHO05D006483 6.4e-12 75.9 164 32.9
MCO17G084 Micromonas commoda HOM05D051517 ORTHO05D006483 1.9e-11 74.3 186 28.0
VMungo0464G1687 Vigna mungo HOM05D005825 ORTHO05D006483 9.3e-11 72.0 55 63.6
SalBow6G2945 Salvia bowleyana HOM05D000060 ORTHO05D000082 1.2e-10 71.6 136 38.2
Cre02.g103000 Chlamydomonas reinhardtii HOM05D024924 ORTHO05D006483 1.7e-09 67.8 144 34.7
Cre12.g488550 Chlamydomonas reinhardtii HOM05D024924 ORTHO05D006483 2.8e-07 60.5 143 30.1
vmacro22117 Vaccinium macrocarpon HOM05D003776 ORTHO05D004459 8.1e-07 58.9 52 63.5
Cre09.g386756 Chlamydomonas reinhardtii HOM05D005825 ORTHO05D006483 1.1e-06 58.5 178 28.7
MCO17G075 Micromonas commoda HOM05D051517 ORTHO05D006483 1.1e-06 58.5 188 25.0
Cre12.g552600 Chlamydomonas reinhardtii HOM05D024924 ORTHO05D006483 6.9e-06 55.8 163 29.4
Pp3c12_8840 Physcomitrium patens HOM05D005825 ORTHO05D006483 9.0e-06 55.5 157 30.6


User provided reference genes

Program Settings